RNA–Protein interactions for RNA: ENST00000252136.11

TRMT2A-201, Transcript of tRNA methyltransferase 2 homolog A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRMT2A, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT2A-201ENST00000252136 IQGAP1P46940 1657 aa24.61■■□□□ 1.53
TRMT2A-201ENST00000252136 PREX2Q70Z35 1606 aa24.59■■□□□ 1.53
TRMT2A-201ENST00000252136 RRP9O43818 475 aaKnown RBP24.59■■□□□ 1.53
TRMT2A-201ENST00000252136 ZKSCAN2Q63HK3 967 aa24.59■■□□□ 1.53
TRMT2A-201ENST00000252136 DZIP1LQ8IYY4 767 aaKnown RBP24.59■■□□□ 1.53
TRMT2A-201ENST00000252136 MYOM1P52179 1685 aa24.58■■□□□ 1.53
TRMT2A-201ENST00000252136 FOXD4L1Q9NU39 408 aa24.58■■□□□ 1.53
TRMT2A-201ENST00000252136 POLR3AO14802 1390 aaPredicted RBP24.58■■□□□ 1.52
TRMT2A-201ENST00000252136 ITPRIPQ8IWB1 547 aa24.57■■□□□ 1.52
TRMT2A-201ENST00000252136 PLXNC1O60486 1568 aa24.56■■□□□ 1.52
TRMT2A-201ENST00000252136 WDR63Q8IWG1 891 aa24.56■■□□□ 1.52
TRMT2A-201ENST00000252136 TSR2Q969E8 191 aaKnown RBP24.56■■□□□ 1.52
TRMT2A-201ENST00000252136 MAST1Q9Y2H9 1570 aa24.56■■□□□ 1.52
TRMT2A-201ENST00000252136 GAS2L3Q86XJ1 694 aa24.55■■□□□ 1.52
TRMT2A-201ENST00000252136 SMC4Q9NTJ3 1288 aa24.55■■□□□ 1.52
TRMT2A-201ENST00000252136 MTHFSP49914 203 aa24.54■■□□□ 1.52
TRMT2A-201ENST00000252136 TNPO1Q92973 898 aaKnown RBP24.54■■□□□ 1.52
TRMT2A-201ENST00000252136 ZMYM3Q14202 1370 aa24.54■■□□□ 1.52
TRMT2A-201ENST00000252136 HSP90AB1P08238 724 aaKnown RBP24.54■■□□□ 1.52
TRMT2A-201ENST00000252136 KDM5AP29375 1690 aaKnown RBP24.54■■□□□ 1.52
TRMT2A-201ENST00000252136 ZNF692Q9BU19 519 aaPredicted RBP24.54■■□□□ 1.52
TRMT2A-201ENST00000252136 DUOX2Q9NRD8 1548 aa24.53■■□□□ 1.52
TRMT2A-201ENST00000252136 SLC12A5Q9H2X9 1139 aa24.53■■□□□ 1.52
TRMT2A-201ENST00000252136 RTEL1-TNFRSF6BF6WH68 1400 aa24.53■■□□□ 1.52
TRMT2A-201ENST00000252136 SCAPERQ9BY12 1400 aa24.53■■□□□ 1.52
TRMT2A-201ENST00000252136 U2AF1L5P0DN76 240 aaPredicted RBP24.52■■□□□ 1.52
TRMT2A-201ENST00000252136 U2AF1Q01081 240 aaKnown RBP eCLIP24.52■■□□□ 1.52
TRMT2A-201ENST00000252136 ERVK-7P63135 1459 aa24.52■■□□□ 1.52
TRMT2A-201ENST00000252136 ERCC6Q03468 1493 aa24.51■■□□□ 1.51
TRMT2A-201ENST00000252136 NSD3Q9BZ95 1437 aa24.5■■□□□ 1.51
TRMT2A-201ENST00000252136 TTC37Q6PGP7 1564 aa24.5■■□□□ 1.51
TRMT2A-201ENST00000252136 ADGRF5Q8IZF2 1346 aa24.5■■□□□ 1.51
TRMT2A-201ENST00000252136 TRIM27P14373 513 aa24.48■■□□□ 1.51
TRMT2A-201ENST00000252136 GBP4Q96PP9 640 aa24.48■■□□□ 1.51
TRMT2A-201ENST00000252136 LNPKQ9C0E8 428 aa24.48■■□□□ 1.51
TRMT2A-201ENST00000252136 CFAP53Q96M91 514 aa24.48■■□□□ 1.51
TRMT2A-201ENST00000252136 PHF23Q9BUL5 403 aaPredicted RBP24.48■■□□□ 1.51
TRMT2A-201ENST00000252136 EXOSC9Q06265 439 aaKnown RBP24.47■■□□□ 1.51
TRMT2A-201ENST00000252136 STAC3Q96MF2 364 aa24.47■■□□□ 1.51
TRMT2A-201ENST00000252136 TRAK1Q9UPV9 953 aa24.46■■□□□ 1.51
TRMT2A-201ENST00000252136 SLC24A1O60721 1099 aa24.46■■□□□ 1.51
TRMT2A-201ENST00000252136 CEP152O94986 1710 aa24.45■■□□□ 1.5
TRMT2A-201ENST00000252136 ISY1Q9ULR0 285 aaKnown RBP24.45■■□□□ 1.5
TRMT2A-201ENST00000252136 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.44■■□□□ 1.53e-6■■□□□ 14.2
TRMT2A-201ENST00000252136 AFAP1Q8N556 730 aa24.44■■□□□ 1.5
TRMT2A-201ENST00000252136 SSH1Q8WYL5 1049 aa24.44■■□□□ 1.5
TRMT2A-201ENST00000252136 DDX19BQ9UMR2 479 aa24.44■■□□□ 1.5
TRMT2A-201ENST00000252136 HDAC1Q13547 482 aaPredicted RBP24.44■■□□□ 1.5
TRMT2A-201ENST00000252136 CHGAP10645 457 aaKnown RBP24.43■■□□□ 1.5
TRMT2A-201ENST00000252136 NOB1Q9ULX3 412 aaKnown RBP24.43■■□□□ 1.5
TRMT2A-201ENST00000252136 SPHKAPQ2M3C7 1700 aa24.42■■□□□ 1.5
TRMT2A-201ENST00000252136 EFCAB2Q5VUJ9 269 aa24.42■■□□□ 1.5
TRMT2A-201ENST00000252136 TMEM57Q8N5G2 664 aa24.42■■□□□ 1.5
TRMT2A-201ENST00000252136 SPAG9O60271 1321 aaKnown RBP24.41■■□□□ 1.5
TRMT2A-201ENST00000252136 DDIT3P35638 169 aa24.41■■□□□ 1.5
TRMT2A-201ENST00000252136 U2SURPO15042 1029 aaKnown RBP24.41■■□□□ 1.5
TRMT2A-201ENST00000252136 CCDC27Q2M243 656 aa24.41■■□□□ 1.5
TRMT2A-201ENST00000252136 ATF7IPQ6VMQ6 1270 aa24.41■■□□□ 1.5
TRMT2A-201ENST00000252136 SMC5Q8IY18 1101 aa24.4■■□□□ 1.5
TRMT2A-201ENST00000252136 CLTCL1P53675 1640 aa24.4■■□□□ 1.5
TRMT2A-201ENST00000252136 RBM25P49756 843 aaKnown RBP24.39■■□□□ 1.5
TRMT2A-201ENST00000252136 RAB3GAP1Q15042 981 aa24.39■■□□□ 1.5
TRMT2A-201ENST00000252136 IQSEC2Q5JU85 1478 aa24.39■■□□□ 1.5
TRMT2A-201ENST00000252136 CD2BP2O95400 341 aaKnown RBP24.39■■□□□ 1.49
TRMT2A-201ENST00000252136 KIAA1211Q6ZU35 1233 aa24.39■■□□□ 1.49
TRMT2A-201ENST00000252136 SNX21Q969T3 373 aa24.39■■□□□ 1.49
TRMT2A-201ENST00000252136 TRAPPC8Q9Y2L5 1435 aa24.38■■□□□ 1.49
TRMT2A-201ENST00000252136 TRPM2O94759 1503 aa24.38■■□□□ 1.49
TRMT2A-201ENST00000252136 SKOR2Q2VWA4 1001 aaPredicted RBP24.38■■□□□ 1.49
TRMT2A-201ENST00000252136 RBM42Q9BTD8 480 aaKnown RBP24.38■■□□□ 1.49
TRMT2A-201ENST00000252136 NASPP49321 788 aaPredicted RBP24.37■■□□□ 1.49
TRMT2A-201ENST00000252136 ANP32BQ92688 251 aaKnown RBP24.37■■□□□ 1.49
TRMT2A-201ENST00000252136 KIF3BO15066 747 aa24.36■■□□□ 1.49
TRMT2A-201ENST00000252136 SSFA2P28290 1259 aa24.36■■□□□ 1.49
TRMT2A-201ENST00000252136 CIZ1Q9ULV3 898 aaPredicted RBP24.36■■□□□ 1.49
TRMT2A-201ENST00000252136 SHPRHQ149N8 1683 aa24.36■■□□□ 1.49
TRMT2A-201ENST00000252136 NCOA3Q9Y6Q9 1424 aa24.35■■□□□ 1.49
TRMT2A-201ENST00000252136 DDX49Q9Y6V7 483 aaKnown RBP24.35■■□□□ 1.49
TRMT2A-201ENST00000252136 PTPRTO14522 1441 aa24.35■■□□□ 1.49
TRMT2A-201ENST00000252136 TPM2P07951 284 aa24.34■■□□□ 1.49
TRMT2A-201ENST00000252136 NCLP19338 710 aaKnown RBP24.33■■□□□ 1.49
TRMT2A-201ENST00000252136 NUCB1Q02818 461 aa24.33■■□□□ 1.49
TRMT2A-201ENST00000252136 ANKRD45Q5TZF3 282 aa24.33■■□□□ 1.49
TRMT2A-201ENST00000252136 TMEM132EQ6IEE7 984 aa24.33■■□□□ 1.49
TRMT2A-201ENST00000252136 CHD1LQ86WJ1 897 aa24.33■■□□□ 1.49
TRMT2A-201ENST00000252136 ZBTB40Q9NUA8 1239 aa24.33■■□□□ 1.49
TRMT2A-201ENST00000252136 GOLGA6L22H0YM25 854 aa24.33■■□□□ 1.49
TRMT2A-201ENST00000252136 CCDC173Q0VFZ6 552 aa24.32■■□□□ 1.48
TRMT2A-201ENST00000252136 KANK1Q14678 1352 aa24.32■■□□□ 1.48
TRMT2A-201ENST00000252136 UGGT1Q9NYU2 1555 aa24.31■■□□□ 1.48
TRMT2A-201ENST00000252136 MSNP26038 577 aaKnown RBP24.31■■□□□ 1.48
TRMT2A-201ENST00000252136 KIF2CQ99661 725 aa24.31■■□□□ 1.48
TRMT2A-201ENST00000252136 ZNF518AQ6AHZ1 1483 aa24.31■■□□□ 1.48
TRMT2A-201ENST00000252136 K7ELQ4 463 aaPredicted RBP24.3■■□□□ 1.48
TRMT2A-201ENST00000252136 RBM10P98175 930 aaKnown RBP24.3■■□□□ 1.48
TRMT2A-201ENST00000252136 GAS2L2Q8NHY3 880 aa24.3■■□□□ 1.48
TRMT2A-201ENST00000252136 C1orf115Q9H7X2 142 aa24.3■■□□□ 1.48
TRMT2A-201ENST00000252136 TMPOP42166 694 aaKnown RBP24.29■■□□□ 1.48
TRMT2A-201ENST00000252136 CT47B1P0C2W7 299 aaPredicted RBP24.29■■□□□ 1.48
TRMT2A-201ENST00000252136 ZSCAN30Q86W11 494 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms