RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 TBX22Q9Y458 520 aa19.36■□□□□ 0.69
SDF2-201ENST00000247020 ATAD2Q6PL18 1390 aa19.35■□□□□ 0.69
SDF2-201ENST00000247020 KNSTRNQ9Y448 316 aa19.35■□□□□ 0.69
SDF2-201ENST00000247020 ADGRB2O60241 1585 aa19.35■□□□□ 0.69
SDF2-201ENST00000247020 PIK3R4Q99570 1358 aa19.34■□□□□ 0.69
SDF2-201ENST00000247020 BCANQ96GW7 911 aa19.33■□□□□ 0.69
SDF2-201ENST00000247020 BRD4O60885 1362 aaPredicted RBP19.33■□□□□ 0.68
SDF2-201ENST00000247020 XRN1Q8IZH2 1706 aaKnown RBP19.33■□□□□ 0.68
SDF2-201ENST00000247020 PTCH1Q13635 1447 aa19.31■□□□□ 0.68
SDF2-201ENST00000247020 SENP3Q9H4L4 574 aaPredicted RBP19.31■□□□□ 0.68
SDF2-201ENST00000247020 MRS2Q9HD23 443 aa19.31■□□□□ 0.68
SDF2-201ENST00000247020 ANKRD36BQ8N2N9 1353 aa19.3■□□□□ 0.68
SDF2-201ENST00000247020 AMER1Q5JTC6 1135 aaPredicted RBP19.3■□□□□ 0.68
SDF2-201ENST00000247020 ANKLE2Q86XL3 938 aa19.29■□□□□ 0.68
SDF2-201ENST00000247020 MINK1Q8N4C8 1332 aaPredicted RBP19.29■□□□□ 0.68
SDF2-201ENST00000247020 SAFB2Q14151 953 aaKnown RBP eCLIP19.28■□□□□ 0.68
SDF2-201ENST00000247020 NLRP13Q86W25 1043 aa19.28■□□□□ 0.68
SDF2-201ENST00000247020 PLEKHH1Q9ULM0 1364 aa19.28■□□□□ 0.68
SDF2-201ENST00000247020 CHD2O14647 1828 aaKnown RBP19.27■□□□□ 0.68
SDF2-201ENST00000247020 PTPRUQ92729 1446 aa19.27■□□□□ 0.68
SDF2-201ENST00000247020 SRPK2P78362 688 aaKnown RBP19.26■□□□□ 0.67
SDF2-201ENST00000247020 CCDC184Q52MB2 194 aa19.25■□□□□ 0.67
SDF2-201ENST00000247020 WAPLQ7Z5K2 1190 aa19.25■□□□□ 0.67
SDF2-201ENST00000247020 CABP2Q9NPB3 220 aa19.25■□□□□ 0.67
SDF2-201ENST00000247020 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.25■□□□□ 0.67
SDF2-201ENST00000247020 ROBO2Q9HCK4 1378 aa19.25■□□□□ 0.67
SDF2-201ENST00000247020 ATP7BP35670 1465 aa19.24■□□□□ 0.67
SDF2-201ENST00000247020 TMC1Q8TDI8 760 aa19.24■□□□□ 0.67
SDF2-201ENST00000247020 CDK19Q9BWU1 502 aa19.24■□□□□ 0.67
SDF2-201ENST00000247020 SLC12A5Q9H2X9 1139 aa19.24■□□□□ 0.67
SDF2-201ENST00000247020 NSD2O96028 1365 aa19.24■□□□□ 0.67
SDF2-201ENST00000247020 NSD3Q9BZ95 1437 aa19.24■□□□□ 0.67
SDF2-201ENST00000247020 CC2D1BQ5T0F9 858 aaKnown RBP19.23■□□□□ 0.67
SDF2-201ENST00000247020 SLC26A8Q96RN1 970 aa19.23■□□□□ 0.67
SDF2-201ENST00000247020 ANKRD26Q9UPS8 1709 aa19.23■□□□□ 0.67
SDF2-201ENST00000247020 WASLO00401 505 aaPredicted RBP19.23■□□□□ 0.67
SDF2-201ENST00000247020 CARD14Q9BXL6 1004 aa19.23■□□□□ 0.67
SDF2-201ENST00000247020 TERF2IPQ9NYB0 399 aa19.21■□□□□ 0.67
SDF2-201ENST00000247020 TOPAZ1Q8N9V7 1692 aa19.21■□□□□ 0.67
SDF2-201ENST00000247020 AMOTL2Q9Y2J4 779 aa19.2■□□□□ 0.66
SDF2-201ENST00000247020 NPHP4O75161 1426 aaPredicted RBP19.2■□□□□ 0.66
SDF2-201ENST00000247020 CD163L1Q9NR16 1453 aa19.2■□□□□ 0.66
SDF2-201ENST00000247020 INSRP06213 1382 aa19.19■□□□□ 0.66
SDF2-201ENST00000247020 CGNL1Q0VF96 1302 aa19.19■□□□□ 0.66
SDF2-201ENST00000247020 ITSN1Q15811 1721 aa19.19■□□□□ 0.66
SDF2-201ENST00000247020 A0A1W2PP64 1363 aa19.19■□□□□ 0.66
SDF2-201ENST00000247020 CNGB1Q14028 1251 aaPredicted RBP19.19■□□□□ 0.66
SDF2-201ENST00000247020 KIF20BQ96Q89 1820 aa19.18■□□□□ 0.66
SDF2-201ENST00000247020 AKAP12Q02952 1782 aa19.18■□□□□ 0.66
SDF2-201ENST00000247020 PNISRQ8TF01 805 aaKnown RBP19.18■□□□□ 0.66
SDF2-201ENST00000247020 CDC42BPGQ6DT37 1551 aa19.17■□□□□ 0.66
SDF2-201ENST00000247020 MON2Q7Z3U7 1717 aa19.17■□□□□ 0.66
SDF2-201ENST00000247020 NWD1Q149M9 1564 aa19.17■□□□□ 0.66
SDF2-201ENST00000247020 HDGFL2Q7Z4V5 671 aaPredicted RBP19.16■□□□□ 0.66
SDF2-201ENST00000247020 PPP2R1AP30153 589 aa19.15■□□□□ 0.66
SDF2-201ENST00000247020 FAM9BQ8IZU0 186 aa19.15■□□□□ 0.66
SDF2-201ENST00000247020 CPSF1Q10570 1443 aaKnown RBP19.14■□□□□ 0.65
SDF2-201ENST00000247020 PPIP5K1Q6PFW1 1433 aa19.14■□□□□ 0.65
SDF2-201ENST00000247020 CCDC61Q9Y6R9 512 aa19.13■□□□□ 0.65
SDF2-201ENST00000247020 HNRNPUQ00839 825 aaKnown RBP eCLIP19.12■□□□□ 0.65
SDF2-201ENST00000247020 NUDT16Q96DE0 195 aaKnown RBP19.12■□□□□ 0.65
SDF2-201ENST00000247020 FMN2Q9NZ56 1722 aa19.12■□□□□ 0.65
SDF2-201ENST00000247020 CABP1Q9NZU7 370 aa19.11■□□□□ 0.65
SDF2-201ENST00000247020 EDC4Q6P2E9 1401 aaKnown RBP19.11■□□□□ 0.65
SDF2-201ENST00000247020 NALCNQ8IZF0 1738 aa19.1■□□□□ 0.65
SDF2-201ENST00000247020 ANKARQ7Z5J8 1434 aa19.09■□□□□ 0.65
SDF2-201ENST00000247020 ZBED9Q6R2W3 1325 aa19.09■□□□□ 0.65
SDF2-201ENST00000247020 KCNA6P17658 529 aa19.09■□□□□ 0.65
SDF2-201ENST00000247020 MORC1Q86VD1 984 aa19.09■□□□□ 0.65
SDF2-201ENST00000247020 NRKQ7Z2Y5 1582 aa19.08■□□□□ 0.65
SDF2-201ENST00000247020 POLR3AO14802 1390 aaPredicted RBP19.07■□□□□ 0.64
SDF2-201ENST00000247020 ZNF692Q9BU19 519 aaPredicted RBP19.07■□□□□ 0.64
SDF2-201ENST00000247020 PRR36Q9H6K5 1346 aa19.07■□□□□ 0.64
SDF2-201ENST00000247020 NKTRP30414 1462 aaKnown RBP19.07■□□□□ 0.64
SDF2-201ENST00000247020 KDM4FA0A1W2PPD8 638 aa19.06■□□□□ 0.64
SDF2-201ENST00000247020 BLMP54132 1417 aaPredicted RBP19.06■□□□□ 0.64
SDF2-201ENST00000247020 PLEKHG3A1L390 1219 aa19.06■□□□□ 0.64
SDF2-201ENST00000247020 NCKAP5LQ9HCH0 1330 aa19.05■□□□□ 0.64
SDF2-201ENST00000247020 RGPD8O14715 1765 aaPredicted RBP19.04■□□□□ 0.64
SDF2-201ENST00000247020 ADGRL3Q9HAR2 1447 aa19.03■□□□□ 0.64
SDF2-201ENST00000247020 LMTK3Q96Q04 1460 aa19.03■□□□□ 0.64
SDF2-201ENST00000247020 FYB1O15117 783 aa19.02■□□□□ 0.64
SDF2-201ENST00000247020 SHPRHQ149N8 1683 aa19.02■□□□□ 0.63
SDF2-201ENST00000247020 SCAF1Q9H7N4 1312 aaKnown RBP19.01■□□□□ 0.63
SDF2-201ENST00000247020 WDR43Q15061 677 aaKnown RBP eCLIP18.99■□□□□ 0.63
SDF2-201ENST00000247020 USP6P35125 1406 aa18.98■□□□□ 0.63
SDF2-201ENST00000247020 NCOA3Q9Y6Q9 1424 aa18.98■□□□□ 0.63
SDF2-201ENST00000247020 STRCQ7RTU9 1775 aa18.98■□□□□ 0.63
SDF2-201ENST00000247020 ACEP12821 1306 aa18.97■□□□□ 0.63
SDF2-201ENST00000247020 CFAP53Q96M91 514 aa18.97■□□□□ 0.63
SDF2-201ENST00000247020 GGNBP2Q9H3C7 697 aa18.97■□□□□ 0.63
SDF2-201ENST00000247020 USP54Q70EL1 1684 aa18.96■□□□□ 0.63
SDF2-201ENST00000247020 SSH2Q76I76 1423 aa18.96■□□□□ 0.62
SDF2-201ENST00000247020 MAP2P11137 1827 aaKnown RBP18.95■□□□□ 0.62
SDF2-201ENST00000247020 STRCP1A6NGW2 1772 aa18.95■□□□□ 0.62
SDF2-201ENST00000247020 AATKQ6ZMQ8 1374 aa18.94■□□□□ 0.62
SDF2-201ENST00000247020 TTC21AQ8NDW8 1320 aa18.94■□□□□ 0.62
SDF2-201ENST00000247020 ADAMTS8Q9UP79 889 aa18.93■□□□□ 0.62
SDF2-201ENST00000247020 MTHFSP49914 203 aa18.93■□□□□ 0.62
SDF2-201ENST00000247020 SMG6Q86US8 1419 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms