RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 SMC4Q9NTJ3 1288 aa11.98□□□□□ -0.49
CCDC113-201ENST00000219299 CLUAP1Q96AJ1 413 aa11.97□□□□□ -0.49
CCDC113-201ENST00000219299 SCAF11Q99590 1463 aaKnown RBP11.97□□□□□ -0.49
CCDC113-201ENST00000219299 IPO8O15397 1037 aaKnown RBP11.97□□□□□ -0.49
CCDC113-201ENST00000219299 ARHGEF12Q9NZN5 1544 aa11.97□□□□□ -0.49
CCDC113-201ENST00000219299 KCNA6P17658 529 aa11.96□□□□□ -0.49
CCDC113-201ENST00000219299 PDE3BQ13370 1112 aa11.96□□□□□ -0.49
CCDC113-201ENST00000219299 CADPS2Q86UW7 1296 aa11.96□□□□□ -0.49
CCDC113-201ENST00000219299 BCL2L13Q9BXK5 485 aa11.96□□□□□ -0.49
CCDC113-201ENST00000219299 MLH3Q9UHC1 1453 aa11.96□□□□□ -0.49
CCDC113-201ENST00000219299 DEKP35659 375 aaKnown RBP11.96□□□□□ -0.5
CCDC113-201ENST00000219299 NME9Q86XW9 330 aa11.96□□□□□ -0.5
CCDC113-201ENST00000219299 RUNDC1Q96C34 613 aa11.96□□□□□ -0.5
CCDC113-201ENST00000219299 RTN4Q9NQC3 1192 aaKnown RBP11.96□□□□□ -0.5
CCDC113-201ENST00000219299 ABCC1P33527 1531 aa11.96□□□□□ -0.5
CCDC113-201ENST00000219299 B4GALNT3Q6L9W6 998 aa11.95□□□□□ -0.5
CCDC113-201ENST00000219299 NPATQ14207 1427 aa11.95□□□□□ -0.5
CCDC113-201ENST00000219299 NSD3Q9BZ95 1437 aa11.95□□□□□ -0.5
CCDC113-201ENST00000219299 CHMP4BQ9H444 224 aaKnown RBP11.95□□□□□ -0.5
CCDC113-201ENST00000219299 ADCY10Q96PN6 1610 aa11.95□□□□□ -0.5
CCDC113-201ENST00000219299 ARHGEF5Q12774 1597 aa11.95□□□□□ -0.5
CCDC113-201ENST00000219299 CHMP4AQ9BY43 222 aa11.94□□□□□ -0.5
CCDC113-201ENST00000219299 PRKAR2BP31323 418 aa11.94□□□□□ -0.5
CCDC113-201ENST00000219299 OS9Q13438 667 aaPredicted RBP11.94□□□□□ -0.5
CCDC113-201ENST00000219299 SULT6B1Q6IMI4 303 aa11.94□□□□□ -0.5
CCDC113-201ENST00000219299 TBX22Q9Y458 520 aa11.94□□□□□ -0.5
CCDC113-201ENST00000219299 PRAG1Q86YV5 1406 aa11.94□□□□□ -0.5
CCDC113-201ENST00000219299 SLC4A10Q6U841 1118 aa11.94□□□□□ -0.5
CCDC113-201ENST00000219299 NAP1L5Q96NT1 182 aaPredicted RBP11.93□□□□□ -0.5
CCDC113-201ENST00000219299 RIMBP3CA6NJZ7 1639 aa11.93□□□□□ -0.5
CCDC113-201ENST00000219299 RIMBP3BA6NNM3 1639 aa11.93□□□□□ -0.5
CCDC113-201ENST00000219299 RIMBP3Q9UFD9 1639 aa11.93□□□□□ -0.5
CCDC113-201ENST00000219299 GOLGA6L22H0YM25 854 aa11.93□□□□□ -0.5
CCDC113-201ENST00000219299 RGS3P49796 1198 aa11.93□□□□□ -0.5
CCDC113-201ENST00000219299 TCP11L2Q8N4U5 519 aa11.93□□□□□ -0.5
CCDC113-201ENST00000219299 TCERG1O14776 1098 aaKnown RBP11.93□□□□□ -0.5
CCDC113-201ENST00000219299 MAGI2Q86UL8 1455 aa11.92□□□□□ -0.5
CCDC113-201ENST00000219299 BRD4O60885 1362 aaPredicted RBP11.92□□□□□ -0.5
CCDC113-201ENST00000219299 LTKP29376 864 aa11.92□□□□□ -0.5
CCDC113-201ENST00000219299 TOM1L2Q6ZVM7 507 aa11.92□□□□□ -0.5
CCDC113-201ENST00000219299 ITPRIPQ8IWB1 547 aa11.92□□□□□ -0.5
CCDC113-201ENST00000219299 UHRF1BP1Q6BDS2 1440 aa11.92□□□□□ -0.5
CCDC113-201ENST00000219299 PREX2Q70Z35 1606 aa11.92□□□□□ -0.5
CCDC113-201ENST00000219299 DISP3Q9P2K9 1392 aa11.92□□□□□ -0.5
CCDC113-201ENST00000219299 CCDC184Q52MB2 194 aa11.92□□□□□ -0.5
CCDC113-201ENST00000219299 RBM19Q9Y4C8 960 aaKnown RBP11.92□□□□□ -0.5
CCDC113-201ENST00000219299 TTC5Q8N0Z6 440 aa11.92□□□□□ -0.5
CCDC113-201ENST00000219299 ACEP12821 1306 aa11.92□□□□□ -0.5
CCDC113-201ENST00000219299 CFAP74Q9C0B2 1584 aa11.91□□□□□ -0.5
CCDC113-201ENST00000219299 E9PSI1 815 aa11.91□□□□□ -0.5
CCDC113-201ENST00000219299 EIF2S2P20042 333 aaKnown RBP11.91□□□□□ -0.5
CCDC113-201ENST00000219299 NECTIN2Q92692 538 aa11.91□□□□□ -0.5
CCDC113-201ENST00000219299 KRT28Q7Z3Y7 464 aa11.91□□□□□ -0.5
CCDC113-201ENST00000219299 APBB1O00213 710 aa11.9□□□□□ -0.5
CCDC113-201ENST00000219299 NGEFQ8N5V2 710 aa11.9□□□□□ -0.5
CCDC113-201ENST00000219299 ZBED9Q6R2W3 1325 aa11.9□□□□□ -0.5
CCDC113-201ENST00000219299 MAST1Q9Y2H9 1570 aa11.89□□□□□ -0.51
CCDC113-201ENST00000219299 C19orf44Q9H6X5 657 aa11.89□□□□□ -0.51
CCDC113-201ENST00000219299 MSH6P52701 1360 aa11.89□□□□□ -0.51
CCDC113-201ENST00000219299 UBAP1LF5GYI3 381 aa11.89□□□□□ -0.51
CCDC113-201ENST00000219299 ADAMTS2O95450 1211 aa11.89□□□□□ -0.51
CCDC113-201ENST00000219299 KCNH5Q8NCM2 988 aa11.89□□□□□ -0.51
CCDC113-201ENST00000219299 FBLN1P23142 703 aa11.88□□□□□ -0.51
CCDC113-201ENST00000219299 TESK2Q96S53 571 aa11.88□□□□□ -0.51
CCDC113-201ENST00000219299 TMEM2Q9UHN6 1383 aa11.88□□□□□ -0.51
CCDC113-201ENST00000219299 PNISRQ8TF01 805 aaKnown RBP11.88□□□□□ -0.51
CCDC113-201ENST00000219299 EMILIN1Q9Y6C2 1016 aa11.88□□□□□ -0.51
CCDC113-201ENST00000219299 TSPYL4Q9UJ04 414 aa11.88□□□□□ -0.51
CCDC113-201ENST00000219299 PLIN1O60240 522 aa11.87□□□□□ -0.51
CCDC113-201ENST00000219299 DDX54Q8TDD1 881 aaKnown RBP11.87□□□□□ -0.51
CCDC113-201ENST00000219299 TATP17735 454 aaPredicted RBP11.87□□□□□ -0.51
CCDC113-201ENST00000219299 PLEKHO1Q53GL0 409 aaPredicted RBP11.87□□□□□ -0.51
CCDC113-201ENST00000219299 RALGAPBQ86X10 1494 aa11.86□□□□□ -0.51
CCDC113-201ENST00000219299 NCLP19338 710 aaKnown RBP11.86□□□□□ -0.51
CCDC113-201ENST00000219299 CDC42BPAQ5VT25 1732 aa11.86□□□□□ -0.51
CCDC113-201ENST00000219299 TOM1O60784 492 aa11.86□□□□□ -0.51
CCDC113-201ENST00000219299 GAS2L2Q8NHY3 880 aa11.86□□□□□ -0.51
CCDC113-201ENST00000219299 SHROOM2Q13796 1616 aa11.86□□□□□ -0.51
CCDC113-201ENST00000219299 GNAI1P63096 354 aa11.85□□□□□ -0.51
CCDC113-201ENST00000219299 HECW2Q9P2P5 1572 aa11.85□□□□□ -0.51
CCDC113-201ENST00000219299 YTHDC2Q9H6S0 1430 aaKnown RBP11.85□□□□□ -0.51
CCDC113-201ENST00000219299 ZNF530Q6P9A1 599 aaPredicted RBP11.85□□□□□ -0.51
CCDC113-201ENST00000219299 GTF2E1P29083 439 aaPredicted RBP11.85□□□□□ -0.51
CCDC113-201ENST00000219299 CDCA7LQ96GN5 454 aa11.85□□□□□ -0.51
CCDC113-201ENST00000219299 CHMP3Q9Y3E7 222 aa11.85□□□□□ -0.51
CCDC113-201ENST00000219299 KDM6BO15054 1643 aa11.85□□□□□ -0.51
CCDC113-201ENST00000219299 SMG6Q86US8 1419 aaKnown RBP11.84□□□□□ -0.51
CCDC113-201ENST00000219299 ARAP3Q8WWN8 1544 aa11.84□□□□□ -0.51
CCDC113-201ENST00000219299 FYB1O15117 783 aa11.83□□□□□ -0.52
CCDC113-201ENST00000219299 PTMAP06454 111 aaKnown RBP11.83□□□□□ -0.52
CCDC113-201ENST00000219299 CHRNA2Q15822 529 aa11.83□□□□□ -0.52
CCDC113-201ENST00000219299 NPHP3Q7Z494 1330 aa11.82□□□□□ -0.52
CCDC113-201ENST00000219299 MSH5O43196 834 aa11.82□□□□□ -0.52
CCDC113-201ENST00000219299 USHBP1Q8N6Y0 703 aa11.82□□□□□ -0.52
CCDC113-201ENST00000219299 TSHZ2Q9NRE2 1034 aa11.82□□□□□ -0.52
CCDC113-201ENST00000219299 TTC21BQ7Z4L5 1316 aa11.82□□□□□ -0.52
CCDC113-201ENST00000219299 LRPPRCP42704 1394 aaKnown RBP11.82□□□□□ -0.52
CCDC113-201ENST00000219299 L1TD1Q5T7N2 865 aaKnown RBP11.82□□□□□ -0.52
CCDC113-201ENST00000219299 NGLY1Q96IV0 654 aa11.82□□□□□ -0.52
CCDC113-201ENST00000219299 ADGBQ8N7X0 1667 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms