RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 KNSTRNQ9Y448 316 aa26.81■■□□□ 1.88
TNFRSF1A-201ENST00000162749 TECPR2O15040 1411 aa26.8■■□□□ 1.88
TNFRSF1A-201ENST00000162749 CPS1P31327 1500 aa26.8■■□□□ 1.88
TNFRSF1A-201ENST00000162749 MINK1Q8N4C8 1332 aaPredicted RBP26.79■■□□□ 1.88
TNFRSF1A-201ENST00000162749 MYBBP1AQ9BQG0 1328 aaKnown RBP26.79■■□□□ 1.88
TNFRSF1A-201ENST00000162749 CC2D1BQ5T0F9 858 aaKnown RBP26.79■■□□□ 1.88
TNFRSF1A-201ENST00000162749 PLEKHH1Q9ULM0 1364 aa26.78■■□□□ 1.88
TNFRSF1A-201ENST00000162749 AMER1Q5JTC6 1135 aaPredicted RBP26.77■■□□□ 1.88
TNFRSF1A-201ENST00000162749 WAPLQ7Z5K2 1190 aa26.77■■□□□ 1.88
TNFRSF1A-201ENST00000162749 CABP2Q9NPB3 220 aa26.76■■□□□ 1.87
TNFRSF1A-201ENST00000162749 SLC12A5Q9H2X9 1139 aa26.75■■□□□ 1.87
TNFRSF1A-201ENST00000162749 TMC1Q8TDI8 760 aa26.74■■□□□ 1.87
TNFRSF1A-201ENST00000162749 FAM135BQ49AJ0 1406 aa26.74■■□□□ 1.87
TNFRSF1A-201ENST00000162749 CARD14Q9BXL6 1004 aa26.74■■□□□ 1.87
TNFRSF1A-201ENST00000162749 DIP2AQ14689 1571 aa26.73■■□□□ 1.87
TNFRSF1A-201ENST00000162749 SLC26A8Q96RN1 970 aa26.73■■□□□ 1.87
TNFRSF1A-201ENST00000162749 NPC1L1Q9UHC9 1359 aa26.73■■□□□ 1.87
TNFRSF1A-201ENST00000162749 BRD4O60885 1362 aaPredicted RBP26.72■■□□□ 1.87
TNFRSF1A-201ENST00000162749 SRPK2P78362 688 aaKnown RBP26.71■■□□□ 1.87
TNFRSF1A-201ENST00000162749 SIRT1Q96EB6 747 aa26.71■■□□□ 1.87
TNFRSF1A-201ENST00000162749 FAM9BQ8IZU0 186 aa26.7■■□□□ 1.87
TNFRSF1A-201ENST00000162749 NLRP13Q86W25 1043 aa26.69■■□□□ 1.86
TNFRSF1A-201ENST00000162749 ATAD2Q6PL18 1390 aa26.69■■□□□ 1.86
TNFRSF1A-201ENST00000162749 PTPRUQ92729 1446 aa26.69■■□□□ 1.86
TNFRSF1A-201ENST00000162749 TBX22Q9Y458 520 aa26.69■■□□□ 1.86
TNFRSF1A-201ENST00000162749 ROBO2Q9HCK4 1378 aa26.68■■□□□ 1.86
TNFRSF1A-201ENST00000162749 NINLQ9Y2I6 1382 aa26.68■■□□□ 1.86
TNFRSF1A-201ENST00000162749 CDK19Q9BWU1 502 aa26.67■■□□□ 1.86
TNFRSF1A-201ENST00000162749 USP32Q8NFA0 1604 aa26.67■■□□□ 1.86
TNFRSF1A-201ENST00000162749 ANKRD36BQ8N2N9 1353 aa26.67■■□□□ 1.86
TNFRSF1A-201ENST00000162749 NSD3Q9BZ95 1437 aa26.67■■□□□ 1.86
TNFRSF1A-201ENST00000162749 PNISRQ8TF01 805 aaKnown RBP26.63■■□□□ 1.85
TNFRSF1A-201ENST00000162749 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.63■■□□□ 1.85
TNFRSF1A-201ENST00000162749 XRN1Q8IZH2 1706 aaKnown RBP26.63■■□□□ 1.85
TNFRSF1A-201ENST00000162749 HNRNPUQ00839 825 aaKnown RBP eCLIP26.62■■□□□ 1.85
TNFRSF1A-201ENST00000162749 ANKLE2Q86XL3 938 aa26.62■■□□□ 1.85
TNFRSF1A-201ENST00000162749 ADGRB2O60241 1585 aa26.61■■□□□ 1.85
TNFRSF1A-201ENST00000162749 A0A1W2PP64 1363 aa26.61■■□□□ 1.85
TNFRSF1A-201ENST00000162749 CD163L1Q9NR16 1453 aa26.6■■□□□ 1.85
TNFRSF1A-201ENST00000162749 WASLO00401 505 aaPredicted RBP26.59■■□□□ 1.85
TNFRSF1A-201ENST00000162749 PTCH1Q13635 1447 aa26.59■■□□□ 1.85
TNFRSF1A-201ENST00000162749 AMOTL2Q9Y2J4 779 aa26.59■■□□□ 1.85
TNFRSF1A-201ENST00000162749 PPP2R1AP30153 589 aa26.57■■□□□ 1.84
TNFRSF1A-201ENST00000162749 CHD2O14647 1828 aaKnown RBP26.57■■□□□ 1.84
TNFRSF1A-201ENST00000162749 PIK3R4Q99570 1358 aa26.56■■□□□ 1.84
TNFRSF1A-201ENST00000162749 CGNL1Q0VF96 1302 aa26.54■■□□□ 1.84
TNFRSF1A-201ENST00000162749 TERF2IPQ9NYB0 399 aa26.54■■□□□ 1.84
TNFRSF1A-201ENST00000162749 CABP1Q9NZU7 370 aa26.54■■□□□ 1.84
TNFRSF1A-201ENST00000162749 SUPT16HQ9Y5B9 1047 aaKnown RBP26.54■■□□□ 1.84
TNFRSF1A-201ENST00000162749 ATP7BP35670 1465 aa26.52■■□□□ 1.84
TNFRSF1A-201ENST00000162749 NSD2O96028 1365 aa26.49■■□□□ 1.83
TNFRSF1A-201ENST00000162749 ANKRD26Q9UPS8 1709 aa26.49■■□□□ 1.83
TNFRSF1A-201ENST00000162749 PPIP5K1Q6PFW1 1433 aa26.49■■□□□ 1.83
TNFRSF1A-201ENST00000162749 NPHP4O75161 1426 aaPredicted RBP26.49■■□□□ 1.83
TNFRSF1A-201ENST00000162749 KIF20BQ96Q89 1820 aa26.47■■□□□ 1.83
TNFRSF1A-201ENST00000162749 KCNA6P17658 529 aa26.47■■□□□ 1.83
TNFRSF1A-201ENST00000162749 HDGFL2Q7Z4V5 671 aaPredicted RBP26.47■■□□□ 1.83
TNFRSF1A-201ENST00000162749 NUDT16Q96DE0 195 aaKnown RBP26.47■■□□□ 1.83
TNFRSF1A-201ENST00000162749 TOPAZ1Q8N9V7 1692 aa26.47■■□□□ 1.83
TNFRSF1A-201ENST00000162749 PRR36Q9H6K5 1346 aa26.46■■□□□ 1.83
TNFRSF1A-201ENST00000162749 ITSN1Q15811 1721 aa26.45■■□□□ 1.83
TNFRSF1A-201ENST00000162749 AKAP12Q02952 1782 aa26.45■■□□□ 1.83
TNFRSF1A-201ENST00000162749 MORC1Q86VD1 984 aa26.45■■□□□ 1.82
TNFRSF1A-201ENST00000162749 CCDC61Q9Y6R9 512 aa26.45■■□□□ 1.82
TNFRSF1A-201ENST00000162749 ZBED9Q6R2W3 1325 aa26.45■■□□□ 1.82
TNFRSF1A-201ENST00000162749 CDC42BPGQ6DT37 1551 aa26.45■■□□□ 1.82
TNFRSF1A-201ENST00000162749 MON2Q7Z3U7 1717 aa26.44■■□□□ 1.82
TNFRSF1A-201ENST00000162749 CPSF1Q10570 1443 aaKnown RBP26.44■■□□□ 1.82
TNFRSF1A-201ENST00000162749 NCKAP5LQ9HCH0 1330 aa26.43■■□□□ 1.82
TNFRSF1A-201ENST00000162749 RGPD8O14715 1765 aaPredicted RBP26.42■■□□□ 1.82
TNFRSF1A-201ENST00000162749 KDM4FA0A1W2PPD8 638 aa26.41■■□□□ 1.82
TNFRSF1A-201ENST00000162749 FYB1O15117 783 aa26.39■■□□□ 1.82
TNFRSF1A-201ENST00000162749 NALCNQ8IZF0 1738 aa26.39■■□□□ 1.81
TNFRSF1A-201ENST00000162749 TNNT2P45379 298 aaPredicted RBP26.38■■□□□ 1.81
TNFRSF1A-201ENST00000162749 INSRP06213 1382 aa26.38■■□□□ 1.81
TNFRSF1A-201ENST00000162749 GGNBP2Q9H3C7 697 aa26.37■■□□□ 1.81
TNFRSF1A-201ENST00000162749 EDC4Q6P2E9 1401 aaKnown RBP26.36■■□□□ 1.81
TNFRSF1A-201ENST00000162749 NUTM2FA1L443 756 aa26.36■■□□□ 1.81
TNFRSF1A-201ENST00000162749 BLMP54132 1417 aaPredicted RBP26.36■■□□□ 1.81
TNFRSF1A-201ENST00000162749 POLR3AO14802 1390 aaPredicted RBP26.35■■□□□ 1.81
TNFRSF1A-201ENST00000162749 FMN2Q9NZ56 1722 aa26.35■■□□□ 1.81
TNFRSF1A-201ENST00000162749 NKTRP30414 1462 aaKnown RBP26.35■■□□□ 1.81
TNFRSF1A-201ENST00000162749 NWD1Q149M9 1564 aa26.34■■□□□ 1.81
TNFRSF1A-201ENST00000162749 ADAMTS8Q9UP79 889 aa26.33■■□□□ 1.81
TNFRSF1A-201ENST00000162749 MYT1Q01538 1121 aa26.33■■□□□ 1.8
TNFRSF1A-201ENST00000162749 SHPRHQ149N8 1683 aa26.32■■□□□ 1.8
TNFRSF1A-201ENST00000162749 NRKQ7Z2Y5 1582 aa26.32■■□□□ 1.8
TNFRSF1A-201ENST00000162749 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.32■■□□□ 1.8
TNFRSF1A-201ENST00000162749 WDR43Q15061 677 aaKnown RBP eCLIP26.31■■□□□ 1.8
TNFRSF1A-201ENST00000162749 SENP3-EIF4A1A0A087X0R7 540 aa26.31■■□□□ 1.8
TNFRSF1A-201ENST00000162749 PLEKHG3A1L390 1219 aa26.3■■□□□ 1.8
TNFRSF1A-201ENST00000162749 ZNF692Q9BU19 519 aaPredicted RBP26.3■■□□□ 1.8
TNFRSF1A-201ENST00000162749 MTHFSP49914 203 aa26.29■■□□□ 1.8
TNFRSF1A-201ENST00000162749 ACEP12821 1306 aa26.28■■□□□ 1.8
TNFRSF1A-201ENST00000162749 ANKARQ7Z5J8 1434 aa26.27■■□□□ 1.8
TNFRSF1A-201ENST00000162749 LMTK3Q96Q04 1460 aa26.27■■□□□ 1.8
TNFRSF1A-201ENST00000162749 MAP2P11137 1827 aaKnown RBP26.27■■□□□ 1.8
TNFRSF1A-201ENST00000162749 HSPA2P54652 639 aa26.26■■□□□ 1.79
TNFRSF1A-201ENST00000162749 RBM33Q96EV2 1170 aaKnown RBP26.26■■□□□ 1.79
TNFRSF1A-201ENST00000162749 ADGRL3Q9HAR2 1447 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms