RNA–Protein interactions for RNA: ENST00000159111.8

KDM4B-201, Transcript of lysine demethylase 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4B, Length 5,593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-201ENST00000159111 CDC45O75419 566 aa20.81■□□□□ 0.92
KDM4B-201ENST00000159111 ATF3P18847 181 aa20.8■□□□□ 0.92
KDM4B-201ENST00000159111 NUCB2P80303 420 aa20.8■□□□□ 0.92
KDM4B-201ENST00000159111 PCF11O94913 1555 aaKnown RBP20.8■□□□□ 0.92
KDM4B-201ENST00000159111 C22orf23Q9BZE7 217 aa20.8■□□□□ 0.92
KDM4B-201ENST00000159111 MARCH6O60337 910 aa20.8■□□□□ 0.92
KDM4B-201ENST00000159111 NOL10Q9BSC4 688 aaKnown RBP20.8■□□□□ 0.92
KDM4B-201ENST00000159111 LAMC3Q9Y6N6 1575 aa20.79■□□□□ 0.92
KDM4B-201ENST00000159111 TRIM29Q14134 588 aa20.79■□□□□ 0.92
KDM4B-201ENST00000159111 NBPF1Q3BBV0 1214 aa20.79■□□□□ 0.92
KDM4B-201ENST00000159111 NBPF8Q3BBV2 869 aa20.79■□□□□ 0.92
KDM4B-201ENST00000159111 TPM3P06753 285 aa20.79■□□□□ 0.92
KDM4B-201ENST00000159111 NOC3LQ8WTT2 800 aaKnown RBP20.79■□□□□ 0.92
KDM4B-201ENST00000159111 LNPKQ9C0E8 428 aa20.79■□□□□ 0.92
KDM4B-201ENST00000159111 MAP3K1Q13233 1512 aa20.79■□□□□ 0.92
KDM4B-201ENST00000159111 GPRASP1Q5JY77 1395 aa20.78■□□□□ 0.92
KDM4B-201ENST00000159111 PDE3AQ14432 1141 aa20.78■□□□□ 0.92
KDM4B-201ENST00000159111 UBTFL1P0CB47 393 aaPredicted RBP20.77■□□□□ 0.92
KDM4B-201ENST00000159111 SLC52A1Q9NWF4 448 aa20.77■□□□□ 0.92
KDM4B-201ENST00000159111 CCDC30Q5VVM6 783 aa20.77■□□□□ 0.92
KDM4B-201ENST00000159111 BECN2A8MW95 431 aa20.77■□□□□ 0.92
KDM4B-201ENST00000159111 TPD52L1Q16890 204 aaPredicted RBP20.77■□□□□ 0.91
KDM4B-201ENST00000159111 MCTP1Q6DN14 999 aa20.77■□□□□ 0.91
KDM4B-201ENST00000159111 PRAM1Q96QH2 718 aa20.77■□□□□ 0.91
KDM4B-201ENST00000159111 CT47B1P0C2W7 299 aaPredicted RBP20.76■□□□□ 0.91
KDM4B-201ENST00000159111 NLRP6P59044 892 aa20.76■□□□□ 0.91
KDM4B-201ENST00000159111 CDK13Q14004 1512 aaKnown RBP20.76■□□□□ 0.91
KDM4B-201ENST00000159111 ANKRD30BQ9BXX2 1392 aa20.76■□□□□ 0.91
KDM4B-201ENST00000159111 RIC3Q7Z5B4 369 aa20.76■□□□□ 0.91
KDM4B-201ENST00000159111 GNAI3P08754 354 aa20.75■□□□□ 0.91
KDM4B-201ENST00000159111 SMG6Q86US8 1419 aaKnown RBP20.75■□□□□ 0.91
KDM4B-201ENST00000159111 TRDNQ13061 729 aa20.75■□□□□ 0.91
KDM4B-201ENST00000159111 CREBRFQ8IUR6 639 aa20.75■□□□□ 0.91
KDM4B-201ENST00000159111 NAIPQ13075 1403 aa20.74■□□□□ 0.91
KDM4B-201ENST00000159111 TPM2P07951 284 aa20.74■□□□□ 0.91
KDM4B-201ENST00000159111 CPLX1O14810 134 aa20.74■□□□□ 0.91
KDM4B-201ENST00000159111 ZNF692Q9BU19 519 aaPredicted RBP20.74■□□□□ 0.91
KDM4B-201ENST00000159111 PTPN23Q9H3S7 1636 aa20.74■□□□□ 0.91
KDM4B-201ENST00000159111 PRKAR2BP31323 418 aa20.74■□□□□ 0.91
KDM4B-201ENST00000159111 GOLGA6L1Q8N7Z2 621 aa20.73■□□□□ 0.91
KDM4B-201ENST00000159111 SMC3Q9UQE7 1217 aa20.73■□□□□ 0.91
KDM4B-201ENST00000159111 CCDC141Q6ZP82 1450 aa20.73■□□□□ 0.91
KDM4B-201ENST00000159111 CDCA7LQ96GN5 454 aa20.73■□□□□ 0.91
KDM4B-201ENST00000159111 WDR97A6NE52 1622 aa20.73■□□□□ 0.91
KDM4B-201ENST00000159111 WDR63Q8IWG1 891 aa20.73■□□□□ 0.91
KDM4B-201ENST00000159111 TPM1P09493 284 aa20.72■□□□□ 0.91
KDM4B-201ENST00000159111 TSR1Q2NL82 804 aaKnown RBP20.72■□□□□ 0.91
KDM4B-201ENST00000159111 GCC1Q96CN9 775 aa20.72■□□□□ 0.91
KDM4B-201ENST00000159111 APPP05067 770 aa20.71■□□□□ 0.91
KDM4B-201ENST00000159111 PLEKHO1Q53GL0 409 aaPredicted RBP20.71■□□□□ 0.91
KDM4B-201ENST00000159111 TXNDC2Q86VQ3 553 aa20.71■□□□□ 0.91
KDM4B-201ENST00000159111 CDK19Q9BWU1 502 aa20.71■□□□□ 0.91
KDM4B-201ENST00000159111 HOOK1Q9UJC3 728 aaKnown RBP20.71■□□□□ 0.91
KDM4B-201ENST00000159111 EXOSC9Q06265 439 aaKnown RBP20.71■□□□□ 0.91
KDM4B-201ENST00000159111 FOXD4L6Q3SYB3 417 aaPredicted RBP20.71■□□□□ 0.91
KDM4B-201ENST00000159111 FOXD4L3Q6VB84 417 aaPredicted RBP20.71■□□□□ 0.91
KDM4B-201ENST00000159111 CNTROBQ8N137 903 aa20.7■□□□□ 0.9
KDM4B-201ENST00000159111 NLRP2Q9NX02 1062 aa20.7■□□□□ 0.9
KDM4B-201ENST00000159111 KIF14Q15058 1648 aa20.7■□□□□ 0.9
KDM4B-201ENST00000159111 CAMSAP2Q08AD1 1489 aa20.7■□□□□ 0.9
KDM4B-201ENST00000159111 VPS53Q5VIR6 699 aa20.7■□□□□ 0.9
KDM4B-201ENST00000159111 PNISRQ8TF01 805 aaKnown RBP20.7■□□□□ 0.9
KDM4B-201ENST00000159111 MAGI1Q96QZ7 1491 aaPredicted RBP20.7■□□□□ 0.9
KDM4B-201ENST00000159111 VPS37DQ86XT2 251 aa20.7■□□□□ 0.9
KDM4B-201ENST00000159111 ATAD2Q6PL18 1390 aa20.69■□□□□ 0.9
KDM4B-201ENST00000159111 RSPH6AQ9H0K4 717 aa20.69■□□□□ 0.9
KDM4B-201ENST00000159111 TWISTNBQ3B726 338 aaPredicted RBP20.69■□□□□ 0.9
KDM4B-201ENST00000159111 ABTB2Q8N961 1025 aa20.69■□□□□ 0.9
KDM4B-201ENST00000159111 ERICH2A1L162 156 aa20.68■□□□□ 0.9
KDM4B-201ENST00000159111 PSMA5P28066 241 aa20.67■□□□□ 0.9
KDM4B-201ENST00000159111 CCDC47Q96A33 483 aaKnown RBP20.67■□□□□ 0.9
KDM4B-201ENST00000159111 SYTL4Q96C24 671 aaPredicted RBP20.67■□□□□ 0.9
KDM4B-201ENST00000159111 WWC1Q8IX03 1113 aa20.67■□□□□ 0.9
KDM4B-201ENST00000159111 RTEL1-TNFRSF6BF6WH68 1400 aa20.67■□□□□ 0.9
KDM4B-201ENST00000159111 NUTM2GQ5VZR2 741 aa20.67■□□□□ 0.9
KDM4B-201ENST00000159111 BICD2Q8TD16 824 aa20.67■□□□□ 0.9
KDM4B-201ENST00000159111 SLC12A5Q9H2X9 1139 aa20.66■□□□□ 0.9
KDM4B-201ENST00000159111 NFXL1Q6ZNB6 911 aa20.66■□□□□ 0.9
KDM4B-201ENST00000159111 TRIM34Q9BYJ4 488 aa20.66■□□□□ 0.9
KDM4B-201ENST00000159111 HIP1O00291 1037 aa20.65■□□□□ 0.9
KDM4B-201ENST00000159111 PES1O00541 588 aaKnown RBP20.65■□□□□ 0.9
KDM4B-201ENST00000159111 AIMP1Q12904 312 aaKnown RBP20.65■□□□□ 0.9
KDM4B-201ENST00000159111 ERC1Q8IUD2 1116 aa20.65■□□□□ 0.9
KDM4B-201ENST00000159111 THEMISQ8N1K5 641 aaPredicted RBP20.65■□□□□ 0.9
KDM4B-201ENST00000159111 PDZRN3Q9UPQ7 1066 aa20.65■□□□□ 0.9
KDM4B-201ENST00000159111 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.65■□□□□ 0.9
KDM4B-201ENST00000159111 NOB1Q9ULX3 412 aaKnown RBP20.64■□□□□ 0.9
KDM4B-201ENST00000159111 VPS37CA5D8V6 355 aaPredicted RBP20.64■□□□□ 0.9
KDM4B-201ENST00000159111 BICRAQ9NZM4 1560 aa20.64■□□□□ 0.89
KDM4B-201ENST00000159111 CLASRPQ8N2M8 674 aaKnown RBP20.64■□□□□ 0.89
KDM4B-201ENST00000159111 CEP89Q96ST8 783 aa20.64■□□□□ 0.89
KDM4B-201ENST00000159111 ANKRD20A12PQ8NF67 263 aa20.63■□□□□ 0.89
KDM4B-201ENST00000159111 CABP1Q9NZU7 370 aa20.63■□□□□ 0.89
KDM4B-201ENST00000159111 ARHGEF11O15085 1522 aa20.63■□□□□ 0.89
KDM4B-201ENST00000159111 GNAI2P04899 355 aa20.63■□□□□ 0.89
KDM4B-201ENST00000159111 MCM2P49736 904 aa20.63■□□□□ 0.89
KDM4B-201ENST00000159111 CCT4P50991 539 aaKnown RBP20.62■□□□□ 0.89
KDM4B-201ENST00000159111 ESCO1Q5FWF5 840 aa20.62■□□□□ 0.89
KDM4B-201ENST00000159111 NEUROD6Q96NK8 337 aa20.62■□□□□ 0.89
KDM4B-201ENST00000159111 RALYLQ86SE5 291 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms