RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 MIA2Q96PC5 1412 aa22.99■■□□□ 1.27
MBD3-201ENST00000156825 CCDC184Q52MB2 194 aa22.99■■□□□ 1.27
MBD3-201ENST00000156825 C22orf23Q9BZE7 217 aa22.98■■□□□ 1.27
MBD3-201ENST00000156825 BCAR3O75815 825 aa22.98■■□□□ 1.27
MBD3-201ENST00000156825 SLC26A8Q96RN1 970 aa22.98■■□□□ 1.27
MBD3-201ENST00000156825 CPLX2Q6PUV4 134 aaKnown RBP22.98■■□□□ 1.27
MBD3-201ENST00000156825 GOLGA6L19H0YKK7 550 aa22.98■■□□□ 1.27
MBD3-201ENST00000156825 DHX16O60231 1041 aaKnown RBP22.98■■□□□ 1.27
MBD3-201ENST00000156825 MEX3CQ5U5Q3 659 aaKnown RBP22.98■■□□□ 1.27
MBD3-201ENST00000156825 BRD4O60885 1362 aaPredicted RBP22.97■■□□□ 1.27
MBD3-201ENST00000156825 INTS3Q68E01 1043 aaKnown RBP22.96■■□□□ 1.27
MBD3-201ENST00000156825 LRRFIP1Q32MZ4 808 aaKnown RBP22.95■■□□□ 1.27
MBD3-201ENST00000156825 SAMD1Q6SPF0 538 aaPredicted RBP22.95■■□□□ 1.26
MBD3-201ENST00000156825 SYNJ2O15056 1496 aa22.95■■□□□ 1.26
MBD3-201ENST00000156825 KDM4AO75164 1064 aa22.95■■□□□ 1.26
MBD3-201ENST00000156825 ROCK1Q13464 1354 aa22.95■■□□□ 1.26
MBD3-201ENST00000156825 TRDNQ13061 729 aa22.95■■□□□ 1.26
MBD3-201ENST00000156825 WASHC4Q2M389 1173 aa22.95■■□□□ 1.26
MBD3-201ENST00000156825 SULT6B1Q6IMI4 303 aa22.95■■□□□ 1.26
MBD3-201ENST00000156825 FYB1O15117 783 aa22.95■■□□□ 1.26
MBD3-201ENST00000156825 SURF6O75683 361 aaKnown RBP22.95■■□□□ 1.26
MBD3-201ENST00000156825 PROSER2Q86WR7 435 aaPredicted RBP22.95■■□□□ 1.26
MBD3-201ENST00000156825 WWC1Q8IX03 1113 aa22.95■■□□□ 1.26
MBD3-201ENST00000156825 BICD2Q8TD16 824 aa22.94■■□□□ 1.26
MBD3-201ENST00000156825 STRN4Q9NRL3 753 aa22.94■■□□□ 1.26
MBD3-201ENST00000156825 NFXL1Q6ZNB6 911 aa22.94■■□□□ 1.26
MBD3-201ENST00000156825 CDK19Q9BWU1 502 aa22.94■■□□□ 1.26
MBD3-201ENST00000156825 NOL10Q9BSC4 688 aaKnown RBP22.94■■□□□ 1.26
MBD3-201ENST00000156825 CHMP5Q9NZZ3 219 aa22.93■■□□□ 1.26
MBD3-201ENST00000156825 TRIM29Q14134 588 aa22.92■■□□□ 1.26
MBD3-201ENST00000156825 RNF20Q5VTR2 975 aa22.92■■□□□ 1.26
MBD3-201ENST00000156825 C9orf84Q5VXU9 1444 aa22.92■■□□□ 1.26
MBD3-201ENST00000156825 TWISTNBQ3B726 338 aaPredicted RBP22.92■■□□□ 1.26
MBD3-201ENST00000156825 CCAR2Q8N163 923 aaKnown RBP22.92■■□□□ 1.26
MBD3-201ENST00000156825 SMC3Q9UQE7 1217 aa22.92■■□□□ 1.26
MBD3-201ENST00000156825 TPM3P06753 285 aa22.91■■□□□ 1.26
MBD3-201ENST00000156825 KLHL34Q8N239 644 aa22.91■■□□□ 1.26
MBD3-201ENST00000156825 MTMR7Q9Y216 660 aa22.91■■□□□ 1.26
MBD3-201ENST00000156825 RRBP1Q9P2E9 1410 aaKnown RBP22.9■■□□□ 1.26
MBD3-201ENST00000156825 ERC2O15083 957 aa22.9■■□□□ 1.26
MBD3-201ENST00000156825 SKOR2Q2VWA4 1001 aaPredicted RBP22.9■■□□□ 1.26
MBD3-201ENST00000156825 FANCIQ9NVI1 1328 aa22.89■■□□□ 1.25
MBD3-201ENST00000156825 HSP90AB4PQ58FF6 505 aa22.89■■□□□ 1.25
MBD3-201ENST00000156825 RBM42Q9BTD8 480 aaKnown RBP22.89■■□□□ 1.25
MBD3-201ENST00000156825 NOB1Q9ULX3 412 aaKnown RBP22.89■■□□□ 1.25
MBD3-201ENST00000156825 AMOTL1Q8IY63 956 aa22.88■■□□□ 1.25
MBD3-201ENST00000156825 TRIM34Q9BYJ4 488 aa22.88■■□□□ 1.25
MBD3-201ENST00000156825 PDZRN3Q9UPQ7 1066 aa22.88■■□□□ 1.25
MBD3-201ENST00000156825 RRS1Q15050 365 aaKnown RBP22.88■■□□□ 1.25
MBD3-201ENST00000156825 XPCQ01831 940 aaPredicted RBP22.88■■□□□ 1.25
MBD3-201ENST00000156825 CCDC27Q2M243 656 aa22.88■■□□□ 1.25
MBD3-201ENST00000156825 AKNAQ7Z591 1439 aa22.88■■□□□ 1.25
MBD3-201ENST00000156825 GPRASP1Q5JY77 1395 aa22.88■■□□□ 1.25
MBD3-201ENST00000156825 SLC4A2P04920 1241 aa22.87■■□□□ 1.25
MBD3-201ENST00000156825 ZNF592Q92610 1267 aa22.87■■□□□ 1.25
MBD3-201ENST00000156825 CCDC30Q5VVM6 783 aa22.86■■□□□ 1.25
MBD3-201ENST00000156825 GAS2L2Q8NHY3 880 aa22.86■■□□□ 1.25
MBD3-201ENST00000156825 FSD1Q9BTV5 496 aa22.86■■□□□ 1.25
MBD3-201ENST00000156825 KIAA1107Q9UPP5 1409 aa22.86■■□□□ 1.25
MBD3-201ENST00000156825 CDC45O75419 566 aa22.86■■□□□ 1.25
MBD3-201ENST00000156825 CLASRPQ8N2M8 674 aaKnown RBP22.86■■□□□ 1.25
MBD3-201ENST00000156825 DNAJC2Q99543 621 aaKnown RBP22.85■■□□□ 1.25
MBD3-201ENST00000156825 PNISRQ8TF01 805 aaKnown RBP22.85■■□□□ 1.25
MBD3-201ENST00000156825 RALYLQ86SE5 291 aaKnown RBP22.84■■□□□ 1.25
MBD3-201ENST00000156825 RBM33Q96EV2 1170 aaKnown RBP22.84■■□□□ 1.25
MBD3-201ENST00000156825 A0A0U1RQG5 324 aaPredicted RBP22.84■■□□□ 1.25
MBD3-201ENST00000156825 HDGFL1Q5TGJ6 251 aa22.83■■□□□ 1.25
MBD3-201ENST00000156825 DDX54Q8TDD1 881 aaKnown RBP22.83■■□□□ 1.25
MBD3-201ENST00000156825 CHMP4CQ96CF2 233 aa22.83■■□□□ 1.25
MBD3-201ENST00000156825 GNAI3P08754 354 aa22.82■■□□□ 1.24
MBD3-201ENST00000156825 TSR1Q2NL82 804 aaKnown RBP22.82■■□□□ 1.24
MBD3-201ENST00000156825 PLEKHO1Q53GL0 409 aaPredicted RBP22.82■■□□□ 1.24
MBD3-201ENST00000156825 CEP89Q96ST8 783 aa22.82■■□□□ 1.24
MBD3-201ENST00000156825 DNAJC5BQ9UF47 199 aa22.82■■□□□ 1.24
MBD3-201ENST00000156825 POLA1P09884 1462 aaPredicted RBP22.81■■□□□ 1.24
MBD3-201ENST00000156825 ERICH2A1L162 156 aa22.81■■□□□ 1.24
MBD3-201ENST00000156825 NFKBIBQ15653 356 aa22.81■■□□□ 1.24
MBD3-201ENST00000156825 PRXQ9BXM0 1461 aa22.8■■□□□ 1.24
MBD3-201ENST00000156825 PCMTD1Q96MG8 357 aaPredicted RBP22.8■■□□□ 1.24
MBD3-201ENST00000156825 SIL1Q9H173 461 aa22.8■■□□□ 1.24
MBD3-201ENST00000156825 HFM1A2PYH4 1435 aa22.8■■□□□ 1.24
MBD3-201ENST00000156825 TROQ12816 1431 aaPredicted RBP22.8■■□□□ 1.24
MBD3-201ENST00000156825 ERICH3Q5RHP9 1530 aa22.8■■□□□ 1.24
MBD3-201ENST00000156825 NEK4P51957 841 aa22.8■■□□□ 1.24
MBD3-201ENST00000156825 BCL11BQ9C0K0 894 aaPredicted RBP22.79■■□□□ 1.24
MBD3-201ENST00000156825 TOPBP1Q92547 1522 aa22.79■■□□□ 1.24
MBD3-201ENST00000156825 ZNF530Q6P9A1 599 aaPredicted RBP22.78■■□□□ 1.24
MBD3-201ENST00000156825 RNF214Q8ND24 703 aa22.78■■□□□ 1.24
MBD3-201ENST00000156825 SNAPC4Q5SXM2 1469 aa22.78■■□□□ 1.24
MBD3-201ENST00000156825 NUCB2P80303 420 aa22.78■■□□□ 1.24
MBD3-201ENST00000156825 THEMISQ8N1K5 641 aaPredicted RBP22.78■■□□□ 1.24
MBD3-201ENST00000156825 ATP2B1P20020 1258 aa22.77■■□□□ 1.24
MBD3-201ENST00000156825 MYL6BP14649 208 aa22.77■■□□□ 1.24
MBD3-201ENST00000156825 PRM3Q9NNZ6 103 aa22.77■■□□□ 1.24
MBD3-201ENST00000156825 CTDP1Q9Y5B0 961 aaPredicted RBP22.77■■□□□ 1.24
MBD3-201ENST00000156825 TCEAL9Q9UHQ7 104 aa22.77■■□□□ 1.24
MBD3-201ENST00000156825 AEBP2Q6ZN18 517 aaPredicted RBP22.77■■□□□ 1.23
MBD3-201ENST00000156825 CNTROBQ8N137 903 aa22.77■■□□□ 1.23
MBD3-201ENST00000156825 MAP4K4O95819 1239 aaPredicted RBP22.76■■□□□ 1.23
MBD3-201ENST00000156825 THUMPD2Q9BTF0 503 aaKnown RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms