RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 Aplp1Q03157 653 aa15.35■□□□□ 0.05
Herc4-208ENSMUST00000219577 P2rx7Q9Z1M0 595 aa15.35■□□□□ 0.05
Herc4-208ENSMUST00000219577 Pabpn1Q8CCS6 302 aaKnown RBP15.35■□□□□ 0.05
Herc4-208ENSMUST00000219577 Tex14Q7M6U3 1450 aa15.35■□□□□ 0.05
Herc4-208ENSMUST00000219577 Kdm2bQ6P1G2 1309 aa15.35■□□□□ 0.05
Herc4-208ENSMUST00000219577 Txndc2Q6P902 515 aa15.35■□□□□ 0.05
Herc4-208ENSMUST00000219577 Nkx1-2P42580 305 aa15.34■□□□□ 0.05
Herc4-208ENSMUST00000219577 Adamts13Q769J6 1426 aa15.34■□□□□ 0.05
Herc4-208ENSMUST00000219577 Usp54Q8BL06 1588 aaKnown RBP15.33■□□□□ 0.05
Herc4-208ENSMUST00000219577 Mast1Q9R1L5 1570 aa15.33■□□□□ 0.05
Herc4-208ENSMUST00000219577 Rbm25B2RY56 838 aaKnown RBP15.33■□□□□ 0.05
Herc4-208ENSMUST00000219577 Plcb2A3KGF7 1181 aa15.33■□□□□ 0.04
Herc4-208ENSMUST00000219577 Igf1rQ60751 1373 aa15.33■□□□□ 0.04
Herc4-208ENSMUST00000219577 Kiaa1107Q80TK0 1369 aa15.32■□□□□ 0.04
Herc4-208ENSMUST00000219577 Zcchc11B2RX14 1644 aaKnown RBP15.32■□□□□ 0.04
Herc4-208ENSMUST00000219577 Gapvd1Q6PAR5 1458 aa15.32■□□□□ 0.04
Herc4-208ENSMUST00000219577 Usp19Q3UJD6 1360 aa15.32■□□□□ 0.04
Herc4-208ENSMUST00000219577 Tnpo1Q8BFY9 898 aaKnown RBP15.32■□□□□ 0.04
Herc4-208ENSMUST00000219577 Cdk19Q8BWD8 501 aa15.32■□□□□ 0.04
Herc4-208ENSMUST00000219577 G3bp1P97855 465 aaKnown RBP15.31■□□□□ 0.04
Herc4-208ENSMUST00000219577 Eif4g3Q80XI3 1579 aaKnown RBP15.31■□□□□ 0.04
Herc4-208ENSMUST00000219577 Gsto1O09131 240 aa15.31■□□□□ 0.04
Herc4-208ENSMUST00000219577 AU022751B1B0V2 589 aa15.31■□□□□ 0.04
Herc4-208ENSMUST00000219577 Stk11ipQ3TAA7 1072 aa15.31■□□□□ 0.04
Herc4-208ENSMUST00000219577 Mcm10Q0VBD2 885 aa15.3■□□□□ 0.04
Herc4-208ENSMUST00000219577 Rrbp1Q99PL5 1605 aaKnown RBP15.3■□□□□ 0.04
Herc4-208ENSMUST00000219577 Rfx1P48377 963 aa15.3■□□□□ 0.04
Herc4-208ENSMUST00000219577 Psme1P97371 249 aa15.3■□□□□ 0.04
Herc4-208ENSMUST00000219577 Gtf3c3Q3TMP1 882 aa15.3■□□□□ 0.04
Herc4-208ENSMUST00000219577 Fgd1P52734 960 aa15.29■□□□□ 0.04
Herc4-208ENSMUST00000219577 Asxl2Q8BZ32 1370 aa15.29■□□□□ 0.04
Herc4-208ENSMUST00000219577 PalmQ9Z0P4 383 aa15.29■□□□□ 0.04
Herc4-208ENSMUST00000219577 Ptch1Q61115 1434 aa15.29■□□□□ 0.04
Herc4-208ENSMUST00000219577 Mre11Q61216 706 aa15.29■□□□□ 0.04
Herc4-208ENSMUST00000219577 Cc2d1aQ8K1A6 943 aa15.29■□□□□ 0.04
Herc4-208ENSMUST00000219577 Sbno1Q689Z5 1390 aa15.29■□□□□ 0.04
Herc4-208ENSMUST00000219577 Maco1Q7TQE6 664 aaKnown RBP15.28■□□□□ 0.04
Herc4-208ENSMUST00000219577 Safb2Q80YR5 991 aaKnown RBP15.28■□□□□ 0.04
Herc4-208ENSMUST00000219577 Ccdc146E9Q9F7 977 aa15.28■□□□□ 0.04
Herc4-208ENSMUST00000219577 Iqgap1Q9JKF1 1657 aaKnown RBP15.28■□□□□ 0.04
Herc4-208ENSMUST00000219577 Plcd4Q8K3R3 807 aa15.27■□□□□ 0.04
Herc4-208ENSMUST00000219577 Slc12a5Q91V14 1138 aa15.27■□□□□ 0.04
Herc4-208ENSMUST00000219577 Atf7ipQ7TT18 1306 aa15.27■□□□□ 0.03
Herc4-208ENSMUST00000219577 Cfap74Q3UY96 1578 aa15.27■□□□□ 0.03
Herc4-208ENSMUST00000219577 Plch2A2AP18 1501 aa15.26■□□□□ 0.03
Herc4-208ENSMUST00000219577 Gm32742A0A1B0GT42 1604 aa15.26■□□□□ 0.03
Herc4-208ENSMUST00000219577 Ppp2r3aB2RXC8 1150 aa15.25■□□□□ 0.03
Herc4-208ENSMUST00000219577 Ppip5k1A2ARP1 1436 aa15.25■□□□□ 0.03
Herc4-208ENSMUST00000219577 Kif1bQ60575 1816 aaKnown RBP15.25■□□□□ 0.03
Herc4-208ENSMUST00000219577 Tnnt1O88346 262 aa15.25■□□□□ 0.03
Herc4-208ENSMUST00000219577 Cog6Q8R3I3 657 aa15.24■□□□□ 0.03
Herc4-208ENSMUST00000219577 Cabp2Q9JLK4 216 aa15.24■□□□□ 0.03
Herc4-208ENSMUST00000219577 Map4k4P97820 1233 aaKnown RBP15.24■□□□□ 0.03
Herc4-208ENSMUST00000219577 Myo3aQ8K3H5 1613 aa15.24■□□□□ 0.03
Herc4-208ENSMUST00000219577 Q4VA45 678 aa15.24■□□□□ 0.03
Herc4-208ENSMUST00000219577 Chmp4cQ9D7F7 232 aa15.24■□□□□ 0.03
Herc4-208ENSMUST00000219577 Htatsf1Q8BGC0 757 aa15.23■□□□□ 0.03
Herc4-208ENSMUST00000219577 Usp16Q99LG0 825 aa15.23■□□□□ 0.03
Herc4-208ENSMUST00000219577 Cdc42bpbQ7TT50 1713 aa15.23■□□□□ 0.03
Herc4-208ENSMUST00000219577 AU019823E9PUQ3 292 aa15.23■□□□□ 0.03
Herc4-208ENSMUST00000219577 Klhdc4Q921I2 584 aa15.22■□□□□ 0.03
Herc4-208ENSMUST00000219577 Cavin4A2AMM0 362 aa15.22■□□□□ 0.03
Herc4-208ENSMUST00000219577 Ccdc9Q8VC31 543 aaKnown RBP15.22■□□□□ 0.03
Herc4-208ENSMUST00000219577 Cep170Q6A065 1588 aa15.22■□□□□ 0.03
Herc4-208ENSMUST00000219577 OvosQ3UU35 1456 aa15.22■□□□□ 0.03
Herc4-208ENSMUST00000219577 Map7O88735 730 aa15.22■□□□□ 0.03
Herc4-208ENSMUST00000219577 MpripP97434 1024 aa15.22■□□□□ 0.03
Herc4-208ENSMUST00000219577 IbtkQ6ZPR6 1352 aaKnown RBP15.21■□□□□ 0.03
Herc4-208ENSMUST00000219577 Swt1Q9DBQ9 907 aa15.2■□□□□ 0.02
Herc4-208ENSMUST00000219577 Col17a1Q07563 1470 aa15.2■□□□□ 0.02
Herc4-208ENSMUST00000219577 NinlQ6ZQ12 1394 aa15.2■□□□□ 0.02
Herc4-208ENSMUST00000219577 Triml2E9PW10 424 aa15.2■□□□□ 0.02
Herc4-208ENSMUST00000219577 Dnttip2Q8R2M2 758 aaKnown RBP15.2■□□□□ 0.02
Herc4-208ENSMUST00000219577 PtprtQ99M80 1454 aa15.19■□□□□ 0.02
Herc4-208ENSMUST00000219577 Kif18aQ91WD7 886 aa15.19■□□□□ 0.02
Herc4-208ENSMUST00000219577 Gm156Q58A37 223 aa15.18■□□□□ 0.02
Herc4-208ENSMUST00000219577 Rnf17Q99MV7 1640 aa15.18■□□□□ 0.02
Herc4-208ENSMUST00000219577 TnikP83510 1323 aa15.17■□□□□ 0.02
Herc4-208ENSMUST00000219577 CastP51125 788 aa15.17■□□□□ 0.02
Herc4-208ENSMUST00000219577 Ppp1r9bQ6R891 817 aaKnown RBP15.17■□□□□ 0.02
Herc4-208ENSMUST00000219577 Slc52a2Q9D8F3 450 aa15.17■□□□□ 0.02
Herc4-208ENSMUST00000219577 KnstrnQ9D9Z1 312 aaKnown RBP15.16■□□□□ 0.02
Herc4-208ENSMUST00000219577 Nphp4P59240 1425 aa15.16■□□□□ 0.02
Herc4-208ENSMUST00000219577 Abcc3B2RX12 1523 aa15.16■□□□□ 0.02
Herc4-208ENSMUST00000219577 Rabep1O35551 862 aa15.15■□□□□ 0.02
Herc4-208ENSMUST00000219577 Sptbn5F6UCX4 1208 aa15.15■□□□□ 0.02
Herc4-208ENSMUST00000219577 Cdc37l1Q9CZP7 335 aa15.15■□□□□ 0.02
Herc4-208ENSMUST00000219577 Tfip11Q9ERA6 838 aaKnown RBP15.15■□□□□ 0.02
Herc4-208ENSMUST00000219577 Nek4Q9Z1J2 792 aa15.15■□□□□ 0.02
Herc4-208ENSMUST00000219577 ShprhQ7TPQ3 1674 aa15.15■□□□□ 0.02
Herc4-208ENSMUST00000219577 HnrnpmQ9D0E1 729 aaKnown RBP15.14■□□□□ 0.01
Herc4-208ENSMUST00000219577 Q3UPC7 1272 aa15.14■□□□□ 0.01
Herc4-208ENSMUST00000219577 Plekhm2Q80TQ5 1018 aa15.14■□□□□ 0.01
Herc4-208ENSMUST00000219577 Ric3Q8BPM6 367 aa15.14■□□□□ 0.01
Herc4-208ENSMUST00000219577 Scaf11E9PZM7 1456 aaKnown RBP15.14■□□□□ 0.01
Herc4-208ENSMUST00000219577 Ggnbp2Q5SV77 696 aa15.14■□□□□ 0.01
Herc4-208ENSMUST00000219577 Cfap65Q3V0B4 1847 aa15.13■□□□□ 0.01
Herc4-208ENSMUST00000219577 Gli2Q0VGT2 1544 aa15.13■□□□□ 0.01
Herc4-208ENSMUST00000219577 SkilQ60665 675 aa15.13■□□□□ 0.01
Herc4-208ENSMUST00000219577 Cabp4Q8VHC5 271 aa15.12■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms