RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 AampJ3QN89 436 aa11.69□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Rabep1O35551 862 aa11.68□□□□□ -0.54
Ldlr-202ENSMUST00000213114 MecomP14404 1042 aa11.68□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Prex2Q3LAC4 1598 aa11.68□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Pcmtd1P59913 357 aa11.68□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Ppp2r3aB2RXC8 1150 aa11.67□□□□□ -0.54
Ldlr-202ENSMUST00000213114 SlkO54988 1233 aa11.67□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Tnnt2P50752 301 aa11.67□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Nol10Q5RJG1 687 aaKnown RBP11.67□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Chmp3Q9CQ10 224 aa11.67□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Ythdc2B2RR83 1445 aaKnown RBP11.67□□□□□ -0.54
Ldlr-202ENSMUST00000213114 MpripP97434 1024 aa11.67□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Rsph3aQ3UFY4 516 aa11.67□□□□□ -0.54
Ldlr-202ENSMUST00000213114 SkilQ60665 675 aa11.66□□□□□ -0.54
Ldlr-202ENSMUST00000213114 HnrnpmQ9D0E1 729 aaKnown RBP11.66□□□□□ -0.54
Ldlr-202ENSMUST00000213114 PtmsQ9D0J8 101 aaKnown RBP11.66□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Znf326O88291 580 aa11.66□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Tnpo1Q8BFY9 898 aaKnown RBP11.66□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Ssh2Q5SW75 1423 aa11.66□□□□□ -0.54
Ldlr-202ENSMUST00000213114 TatQ8QZR1 454 aa11.65□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Cabp2Q9JLK4 216 aa11.65□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Nek4Q9Z1J2 792 aa11.65□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Mug2P28666 1451 aa11.65□□□□□ -0.54
Ldlr-202ENSMUST00000213114 PalmQ9Z0P4 383 aa11.65□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Abcc1O35379 1528 aa11.65□□□□□ -0.54
Ldlr-202ENSMUST00000213114 AI481877A2ALV5 1481 aa11.65□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Ccdc171E9Q1U1 1324 aa11.64□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Zranb1Q7M760 708 aa11.64□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Q9D2X8 372 aa11.64□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Liat1Q810M6 228 aa11.64□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Eif4g3Q80XI3 1579 aaKnown RBP11.64□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Kank1E9Q238 1360 aa11.64□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Adamts12Q811B3 1600 aa11.64□□□□□ -0.55
Ldlr-202ENSMUST00000213114 CgnP59242 1191 aa11.64□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Pde3bQ61409 1100 aa11.64□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Plcd4Q8K3R3 807 aa11.63□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Lmo7E9PYF4 1699 aaKnown RBP11.63□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Iffo2Q8R2V2 512 aa11.63□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Chmp4cQ9D7F7 232 aa11.63□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Peg3Q3URU2 1571 aa11.63□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Kdm5bQ80Y84 1544 aa11.63□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Evi5lH3BKQ3 813 aa11.62□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Sv2bQ8BG39 683 aa11.62□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Chmp7Q8R1T1 451 aa11.62□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Kdm3bQ6ZPY7 1562 aa11.62□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Arhgef12Q8R4H2 1543 aaKnown RBP11.62□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Ubap1lG3UW59 384 aa11.62□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Stk11ipQ3TAA7 1072 aa11.62□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Gm156Q58A37 223 aa11.62□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Cetn4Q8K4K1 168 aa11.62□□□□□ -0.55
Ldlr-202ENSMUST00000213114 RalgapbQ8BQZ4 1484 aa11.62□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Abca5Q8K448 1642 aa11.62□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Atf3Q60765 181 aa11.62□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Bcl11bQ99PV8 884 aa11.62□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Map4k4P97820 1233 aaKnown RBP11.61□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Cog6Q8R3I3 657 aa11.61□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Adcy10Q8C0T9 1614 aa11.61□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Casq1O09165 405 aa11.61□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Smc5Q8CG46 1101 aaKnown RBP11.61□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Mapkbp1Q6NS57 1503 aa11.6□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Maco1Q7TQE6 664 aaKnown RBP11.6□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Gapvd1Q6PAR5 1458 aa11.59□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Phactr2B1AVP0 632 aa11.59□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Gm10471E9Q1C7 252 aa11.59□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Bcl2l13P59017 434 aa11.59□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Kif18aQ91WD7 886 aa11.59□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Cfdp1O88271 295 aaKnown RBP11.59□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Atp6v1dP57746 247 aa11.59□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Ggnbp2Q5SV77 696 aa11.59□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Filip1lQ6P6L0 1131 aa11.59□□□□□ -0.55
Ldlr-202ENSMUST00000213114 OvosQ3UU35 1456 aa11.59□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Cdc37l1Q9CZP7 335 aa11.59□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Naip6Q9JIB6 1403 aa11.58□□□□□ -0.55
Ldlr-202ENSMUST00000213114 Uspl1Q3ULM6 1089 aa11.58□□□□□ -0.56
Ldlr-202ENSMUST00000213114 Slc12a5Q91V14 1138 aa11.58□□□□□ -0.56
Ldlr-202ENSMUST00000213114 Cdk13Q69ZA1 1511 aaKnown RBP11.58□□□□□ -0.56
Ldlr-202ENSMUST00000213114 Smarce1O54941 411 aaKnown RBP11.58□□□□□ -0.56
Ldlr-202ENSMUST00000213114 Rab11fip3Q8CHD8 1047 aa11.58□□□□□ -0.56
Ldlr-202ENSMUST00000213114 Rrp12Q6P5B0 1295 aaKnown RBP11.57□□□□□ -0.56
Ldlr-202ENSMUST00000213114 IbtkQ6ZPR6 1352 aaKnown RBP11.57□□□□□ -0.56
Ldlr-202ENSMUST00000213114 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.57□□□□□ -0.56
Ldlr-202ENSMUST00000213114 CrebrfQ8CDG5 640 aaKnown RBP11.57□□□□□ -0.56
Ldlr-202ENSMUST00000213114 Cpsf1Q9EPU4 1441 aaKnown RBP11.57□□□□□ -0.56
Ldlr-202ENSMUST00000213114 Fchsd2Q3USJ8 740 aa11.57□□□□□ -0.56
Ldlr-202ENSMUST00000213114 AppP12023 770 aa11.56□□□□□ -0.56
Ldlr-202ENSMUST00000213114 St18Q80TY4 1045 aa11.56□□□□□ -0.56
Ldlr-202ENSMUST00000213114 Gsdma3Q5Y4Y6 464 aa11.56□□□□□ -0.56
Ldlr-202ENSMUST00000213114 Zranb3Q6NZP1 1069 aa11.56□□□□□ -0.56
Ldlr-202ENSMUST00000213114 Sirt1Q923E4 737 aa11.56□□□□□ -0.56
Ldlr-202ENSMUST00000213114 Hmox1P14901 289 aa11.55□□□□□ -0.56
Ldlr-202ENSMUST00000213114 HypkQ9CR41 129 aa11.55□□□□□ -0.56
Ldlr-202ENSMUST00000213114 Cyp46a1Q9WVK8 500 aa11.55□□□□□ -0.56
Ldlr-202ENSMUST00000213114 PnnO35691 725 aaKnown RBP11.54□□□□□ -0.56
Ldlr-202ENSMUST00000213114 TmpoQ61033 693 aaKnown RBP11.54□□□□□ -0.56
Ldlr-202ENSMUST00000213114 Plekhm2Q80TQ5 1018 aa11.54□□□□□ -0.56
Ldlr-202ENSMUST00000213114 Tceal9Q9DD24 104 aa11.54□□□□□ -0.56
Ldlr-202ENSMUST00000213114 Gprasp1Q5U4C1 1347 aa11.54□□□□□ -0.56
Ldlr-202ENSMUST00000213114 Dennd6aQ8BH65 605 aa11.54□□□□□ -0.56
Ldlr-202ENSMUST00000213114 PtprgQ05909 1442 aa11.53□□□□□ -0.56
Ldlr-202ENSMUST00000213114 Zmym4A2A791 1549 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms