RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Lrrc9Q8CDN9 1456 aa16.56■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 Rfx1P48377 963 aa16.56■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 Gas2l2Q5SSG4 860 aa16.55■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 Ric3Q8BPM6 367 aa16.55■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 Rusc2Q80U22 1514 aa16.55■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 Cpsf1Q9EPU4 1441 aaKnown RBP16.55■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 Mre11Q61216 706 aa16.54■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 Ggt6Q6PDE7 497 aa16.54■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 Chmp4cQ9D7F7 232 aa16.54■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 Znf608Q56A10 1511 aa16.54■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 Stk11ipQ3TAA7 1072 aa16.53■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 Asxl2Q8BZ32 1370 aa16.53■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 AU015836B2RUM3 263 aa16.53■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 Zfp777B9EKF4 885 aa16.53■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 Mcm10Q0VBD2 885 aa16.53■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 Kank1E9Q238 1360 aa16.53■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 Erbb3Q61526 1339 aa16.53■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 Gnai1B2RSH2 354 aa16.52■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 Ggnbp2Q5SV77 696 aa16.52■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 Slc12a5Q91V14 1138 aa16.52■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 Gnai3Q9DC51 354 aa16.52■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 Abcc2Q8VI47 1543 aa16.52■□□□□ 0.23
Pdgfra-205ENSMUST00000201711 Larp1bA0A0A6YXJ7 370 aaKnown RBP16.51■□□□□ 0.23
Pdgfra-205ENSMUST00000201711 Bcl2l13P59017 434 aa16.51■□□□□ 0.23
Pdgfra-205ENSMUST00000201711 Adgrl2Q8JZZ7 1487 aa16.51■□□□□ 0.23
Pdgfra-205ENSMUST00000201711 PtmaP26350 111 aa16.5■□□□□ 0.23
Pdgfra-205ENSMUST00000201711 Egfem1Q8C088 590 aa16.5■□□□□ 0.23
Pdgfra-205ENSMUST00000201711 Slc4a10Q5DTL9 1118 aa16.5■□□□□ 0.23
Pdgfra-205ENSMUST00000201711 Plcd4Q8K3R3 807 aa16.5■□□□□ 0.23
Pdgfra-205ENSMUST00000201711 Trim44Q9QXA7 346 aa16.5■□□□□ 0.23
Pdgfra-205ENSMUST00000201711 Gapvd1Q6PAR5 1458 aa16.49■□□□□ 0.23
Pdgfra-205ENSMUST00000201711 Eif4g2Q62448 906 aaKnown RBP16.49■□□□□ 0.23
Pdgfra-205ENSMUST00000201711 Kiaa1551Q5DTW7 1521 aa16.49■□□□□ 0.23
Pdgfra-205ENSMUST00000201711 Maco1Q7TQE6 664 aaKnown RBP16.48■□□□□ 0.23
Pdgfra-205ENSMUST00000201711 Uspl1Q3ULM6 1089 aa16.48■□□□□ 0.23
Pdgfra-205ENSMUST00000201711 Abcc6Q9R1S7 1498 aa16.48■□□□□ 0.23
Pdgfra-205ENSMUST00000201711 Brpf1B2RRD7 1212 aa16.46■□□□□ 0.23
Pdgfra-205ENSMUST00000201711 Aplp1Q03157 653 aa16.46■□□□□ 0.23
Pdgfra-205ENSMUST00000201711 Ythdc1E9Q5K9 736 aaKnown RBP16.46■□□□□ 0.23
Pdgfra-205ENSMUST00000201711 Edc4Q3UJB9 1406 aaKnown RBP16.46■□□□□ 0.23
Pdgfra-205ENSMUST00000201711 Dnttip2Q8R2M2 758 aaKnown RBP16.45■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 Fyb1O35601 819 aa16.45■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 Tnpo1Q8BFY9 898 aaKnown RBP16.45■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 Ptch1Q61115 1434 aa16.45■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 Zmym4A2A791 1549 aaKnown RBP16.45■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 Nek4Q9Z1J2 792 aa16.45■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 Cdc37l1Q9CZP7 335 aa16.44■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 Cog6Q8R3I3 657 aa16.44■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 Ppp2r3aB2RXC8 1150 aa16.44■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 AatkQ80YE4 1365 aa16.43■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 Map4k4P97820 1233 aaKnown RBP16.43■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 Ciz1Q8VEH2 845 aa16.43■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 TatQ8QZR1 454 aa16.42■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 Mroh2aD3Z750 1679 aa16.42■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 Atl3Q91YH5 541 aa16.42■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 NinlQ6ZQ12 1394 aa16.42■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 Smc5Q8CG46 1101 aaKnown RBP16.42■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 SkilQ60665 675 aa16.41■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 Q9D2X8 372 aa16.41■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 Sv2bQ8BG39 683 aa16.41■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 Supt6hQ62383 1726 aaKnown RBP16.41■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 Kif14L0N7N1 1674 aaKnown RBP16.41■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 Pbrm1Q8BSQ9 1634 aaKnown RBP16.4■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 Fmn2Q9JL04 1578 aa16.4■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 Klhdc4Q921I2 584 aa16.4■□□□□ 0.22
Pdgfra-205ENSMUST00000201711 Tarbp1E9Q368 1579 aa16.39■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Fam208aQ69ZR9 1610 aaKnown RBP16.39■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 IbtkQ6ZPR6 1352 aaKnown RBP16.39■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Q3UJC8 639 aa16.39■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 TmpoQ61033 693 aaKnown RBP16.38■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Cfap74Q3UY96 1578 aa16.38■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Rassf8Q8CJ96 419 aa16.38■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Kif18aQ91WD7 886 aa16.38■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 MccE9PWI3 1003 aa16.38■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Rabep1O35551 862 aa16.38■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Dennd6aQ8BH65 605 aa16.38■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Ccdc171E9Q1U1 1324 aa16.38■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Plekhm2Q80TQ5 1018 aa16.37■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Bcl11bQ99PV8 884 aa16.37■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Map3k4O08648 1597 aa16.37■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Evi5lH3BKQ3 813 aa16.37■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Cfdp1O88271 295 aaKnown RBP16.37■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Gm10471E9Q1C7 252 aa16.36■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 SlkO54988 1233 aa16.36■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Sh3bp5Q9Z131 463 aa16.36■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 TnikP83510 1323 aa16.36■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Eif4g3Q80XI3 1579 aaKnown RBP16.36■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Pprc1Q6NZN1 1644 aa16.35■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Fkbp4P30416 458 aa16.35■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Chmp3Q9CQ10 224 aa16.35■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Duxf3A0A0N4SV92 674 aa16.35■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Q3UPC7 1272 aa16.35■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Clstn1Q9EPL2 979 aa16.35■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Cyb5rlB1AS42 316 aa16.34■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 MecomP14404 1042 aa16.34■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Pes1Q9EQ61 584 aaKnown RBP16.34■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Phactr2B1AVP0 632 aa16.34■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Cdc42bpaQ3UU96 1719 aa16.33■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 Ccne1Q61457 408 aa16.33■□□□□ 0.21
Pdgfra-205ENSMUST00000201711 AU022751B1B0V2 589 aa16.33■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 33.8 ms