RNA–Protein interactions for RNA: ENSMUST00000194038.1

Pcdha8-201, Transcript of Protocadherin alpha 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha8, Length 5,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8-201ENSMUST00000194038 Rab3gap2Q8BMG7 1366 aa17.19■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Chmp4cQ9D7F7 232 aa17.19■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Usp48Q3V0C5 1052 aa17.19■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Nol12Q8BG17 217 aa17.18■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Mrvi1Q9WUX5 899 aaKnown RBP17.18■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Nsd2Q8BVE8 1365 aa17.18■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Necab1Q8BG18 352 aa17.18■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Ssh1Q76I79 1042 aa17.17■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 ErbinQ80TH2 1402 aa17.17■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Ppp2r1aQ76MZ3 589 aa17.17■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Q7TT23 1179 aa17.17■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 WrnO09053 1401 aa17.17■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Tmco3Q8BH01 678 aa17.17■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Cc2d2bA0A286YDU8 1405 aa17.16■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Shq1Q7TMX5 569 aa17.16■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Odf2A3KGV1 830 aaKnown RBP17.16■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Def6Q8C2K1 630 aa17.16■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Vps53Q8CCB4 832 aa17.16■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Mink1Q9JM52 1308 aa17.16■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Nectin2P32507 530 aa17.16■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Dctn1O08788 1281 aa17.15■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Olfml1Q8BSH2 233 aa17.15■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Gcc1Q9D4H2 778 aa17.15■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Paxip1Q6NZQ4 1056 aa17.15■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 Znf771Q8BJ90 317 aa17.15■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 LrpprcQ6PB66 1392 aaKnown RBP17.14■□□□□ 0.34
Pcdha8-201ENSMUST00000194038 A0A0U1RNP2 1173 aa17.14■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Nutm1Q8BHP2 1126 aa17.14■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Plekhg5Q66T02 1073 aa17.14■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Fam43aQ8BUP8 424 aa17.13■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Ncapd3Q6ZQK0 1506 aa17.13■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Sv2bQ8BG39 683 aa17.13■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Ncoa2Q61026 1462 aa17.12■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 HmmrQ00547 794 aaKnown RBP17.12■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Podxl2Q8CAE9 603 aa17.12■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Trim29Q8R2Q0 587 aa17.12■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Ift140E9PY46 1464 aa17.12■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Fam184aE9PW83 1143 aa17.11■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Fmnl2A2APV2 1086 aa17.11■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Q8C5K5 320 aa17.11■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 FosbP13346 338 aa17.11■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Cavin4A2AMM0 362 aa17.11■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Tdrd9Q14BI7 1383 aa17.1■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Cttnbp2B9EJA2 1648 aa17.1■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Q8BT18 775 aa17.1■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Gsto1O09131 240 aa17.1■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Hoxa7P02830 229 aa17.1■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Neurod6P48986 337 aa17.1■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Gsdma3Q5Y4Y6 464 aa17.1■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Tubb6Q922F4 447 aa17.1■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 NexnQ7TPW1 607 aa17.1■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Ccdc43Q9CR29 222 aaKnown RBP17.09■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Cfdp1O88271 295 aaKnown RBP17.09■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Chmp7Q8R1T1 451 aa17.09■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Q9D9S1 216 aa17.09■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Phldb1Q6PDH0 1371 aaKnown RBP17.08■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Noc3lQ8VI84 807 aaKnown RBP17.08■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Kif18aQ91WD7 886 aa17.08■□□□□ 0.33
Pcdha8-201ENSMUST00000194038 Me1P06801 572 aa17.08■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 CastP51125 788 aa17.08■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 CrcpO35427 148 aa17.08■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Cep112Q5PR68 954 aa17.07■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Hap1O35668 628 aa17.07■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Ppm1eQ80TL0 749 aa17.07■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Smc2Q8CG48 1191 aaKnown RBP17.07■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Cog6Q8R3I3 657 aa17.07■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Gps2Q921N8 327 aa17.07■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 TnmdQ9EP64 317 aa17.07■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Stk11ipQ3TAA7 1072 aa17.07■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Efcab5A0JP43 1406 aa17.07■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Nat10Q8K224 1024 aaKnown RBP17.06■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Myom3A2ABU4 1439 aa17.06■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 FanciQ8K368 1330 aa17.06■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 NcapgE9PWG6 1004 aa17.06■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Med4Q9CQA5 270 aa17.06■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 NefhP19246 1090 aa17.06■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 March6Q6ZQ89 909 aa17.06■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Ccp110Q7TSH4 1004 aa17.06■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Trim55G3X8Y1 545 aa17.05■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Pdia4P08003 638 aaKnown RBP17.05■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Ubap1lG3UW59 384 aa17.05■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Stk3Q9JI10 497 aa17.05■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Naip1Q9QWK5 1403 aa17.04■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Gm21190A0A0G2JGJ6 266 aa17.04■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Kcnh8P59111 1102 aa17.04■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Puf60Q3UEB3 564 aaKnown RBP17.04■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Bag1Q60739 355 aa17.04■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Nphp1Q9QY53 687 aa17.03■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Stk38Q91VJ4 465 aa17.03■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Smarca4Q3TKT4 1613 aaKnown RBP17.03■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Ccdc102aQ3TMW1 549 aa17.03■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Otud6bQ8K2H2 294 aa17.03■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Pmfbp1Q9WVQ0 1022 aa17.03■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Gnai2P08752 355 aaKnown RBP17.02■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Nap1l1P28656 391 aaKnown RBP17.02■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Polr1aO35134 1717 aaKnown RBP17.02■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Dnaaf4Q8R368 420 aa17.02■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Krt85Q9Z2T6 507 aa17.02■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Ggt6Q6PDE7 497 aa17.02■□□□□ 0.32
Pcdha8-201ENSMUST00000194038 Top2aQ01320 1528 aaKnown RBP17.02■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms