RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 Fam50bQ9WTJ8 334 aa13.56□□□□□ -0.24
Msh3-202ENSMUST00000185852 Ccne1Q61457 408 aa13.56□□□□□ -0.24
Msh3-202ENSMUST00000185852 Tmem132eQ6IEE6 982 aa13.56□□□□□ -0.24
Msh3-202ENSMUST00000185852 Chmp7Q8R1T1 451 aa13.56□□□□□ -0.24
Msh3-202ENSMUST00000185852 Brpf1B2RRD7 1212 aa13.55□□□□□ -0.24
Msh3-202ENSMUST00000185852 Cdk13Q69ZA1 1511 aaKnown RBP13.55□□□□□ -0.24
Msh3-202ENSMUST00000185852 Plcb2A3KGF7 1181 aa13.55□□□□□ -0.24
Msh3-202ENSMUST00000185852 Ric3Q8BPM6 367 aa13.55□□□□□ -0.24
Msh3-202ENSMUST00000185852 Znf518aB2RRF6 1478 aaKnown RBP13.54□□□□□ -0.24
Msh3-202ENSMUST00000185852 Asxl1P59598 1514 aa13.54□□□□□ -0.24
Msh3-202ENSMUST00000185852 Abca16E9PWJ7 1678 aa13.54□□□□□ -0.24
Msh3-202ENSMUST00000185852 Arhgef11Q68FM7 1552 aa13.54□□□□□ -0.24
Msh3-202ENSMUST00000185852 Zfp777B9EKF4 885 aa13.54□□□□□ -0.24
Msh3-202ENSMUST00000185852 Tspyl2Q7TQI8 677 aa13.54□□□□□ -0.24
Msh3-202ENSMUST00000185852 Abcc2Q8VI47 1543 aa13.54□□□□□ -0.24
Msh3-202ENSMUST00000185852 Mug2P28666 1451 aa13.53□□□□□ -0.24
Msh3-202ENSMUST00000185852 Dnajc5gQ8C632 165 aa13.53□□□□□ -0.24
Msh3-202ENSMUST00000185852 Cavin4A2AMM0 362 aa13.52□□□□□ -0.25
Msh3-202ENSMUST00000185852 KarsQ99MN1 595 aaKnown RBP13.52□□□□□ -0.25
Msh3-202ENSMUST00000185852 Rassf8Q8CJ96 419 aa13.52□□□□□ -0.25
Msh3-202ENSMUST00000185852 Stk11ipQ3TAA7 1072 aa13.51□□□□□ -0.25
Msh3-202ENSMUST00000185852 Cfdp1O88271 295 aaKnown RBP13.51□□□□□ -0.25
Msh3-202ENSMUST00000185852 Map7O88735 730 aa13.51□□□□□ -0.25
Msh3-202ENSMUST00000185852 BcanQ61361 883 aa13.51□□□□□ -0.25
Msh3-202ENSMUST00000185852 Klhdc4Q921I2 584 aa13.5□□□□□ -0.25
Msh3-202ENSMUST00000185852 Trim58Q5NCC9 485 aa13.5□□□□□ -0.25
Msh3-202ENSMUST00000185852 TmpoQ61033 693 aaKnown RBP13.5□□□□□ -0.25
Msh3-202ENSMUST00000185852 Chrna2Q91X60 512 aa13.5□□□□□ -0.25
Msh3-202ENSMUST00000185852 Mbd3Q9Z2D8 285 aaKnown RBP13.5□□□□□ -0.25
Msh3-202ENSMUST00000185852 Ddx17Q501J6 650 aaKnown RBP13.49□□□□□ -0.25
Msh3-202ENSMUST00000185852 Sart3Q9JLI8 962 aaKnown RBP13.49□□□□□ -0.25
Msh3-202ENSMUST00000185852 NinlQ6ZQ12 1394 aa13.49□□□□□ -0.25
Msh3-202ENSMUST00000185852 Map3k13Q1HKZ5 959 aa13.49□□□□□ -0.25
Msh3-202ENSMUST00000185852 AppP12023 770 aa13.49□□□□□ -0.25
Msh3-202ENSMUST00000185852 Gnai1B2RSH2 354 aa13.48□□□□□ -0.25
Msh3-202ENSMUST00000185852 Gnai3Q9DC51 354 aa13.48□□□□□ -0.25
Msh3-202ENSMUST00000185852 Sh3bp5Q9Z131 463 aa13.48□□□□□ -0.25
Msh3-202ENSMUST00000185852 InsrP15208 1372 aa13.48□□□□□ -0.25
Msh3-202ENSMUST00000185852 AlkP97793 1621 aa13.48□□□□□ -0.25
Msh3-202ENSMUST00000185852 HnrnpuQ8VEK3 800 aaKnown RBP13.48□□□□□ -0.25
Msh3-202ENSMUST00000185852 KnstrnQ9D9Z1 312 aaKnown RBP13.48□□□□□ -0.25
Msh3-202ENSMUST00000185852 Adgrl3Q80TS3 1537 aa13.48□□□□□ -0.25
Msh3-202ENSMUST00000185852 TnikP83510 1323 aa13.48□□□□□ -0.25
Msh3-202ENSMUST00000185852 Yeats2Q3TUF7 1407 aa13.47□□□□□ -0.25
Msh3-202ENSMUST00000185852 AatkQ80YE4 1365 aa13.47□□□□□ -0.25
Msh3-202ENSMUST00000185852 PrkcshO08795 521 aa13.47□□□□□ -0.25
Msh3-202ENSMUST00000185852 Gas2l2Q5SSG4 860 aa13.47□□□□□ -0.25
Msh3-202ENSMUST00000185852 Sv2bQ8BG39 683 aa13.47□□□□□ -0.25
Msh3-202ENSMUST00000185852 Depdc5P61460 1591 aa13.47□□□□□ -0.25
Msh3-202ENSMUST00000185852 Gm21680A0A0G2JGR8 267 aa13.46□□□□□ -0.25
Msh3-202ENSMUST00000185852 Speer4bQ9D9F7 267 aa13.46□□□□□ -0.25
Msh3-202ENSMUST00000185852 Pcdh10E9PXQ7 1057 aa13.46□□□□□ -0.25
Msh3-202ENSMUST00000185852 Eif2s2Q99L45 331 aaKnown RBP13.46□□□□□ -0.25
Msh3-202ENSMUST00000185852 Gli2Q0VGT2 1544 aa13.46□□□□□ -0.25
Msh3-202ENSMUST00000185852 Ppm1gQ61074 542 aa13.46□□□□□ -0.26
Msh3-202ENSMUST00000185852 HypkQ9CR41 129 aa13.46□□□□□ -0.26
Msh3-202ENSMUST00000185852 Fmnl2A2APV2 1086 aa13.45□□□□□ -0.26
Msh3-202ENSMUST00000185852 Chmp4bQ9D8B3 224 aaKnown RBP13.45□□□□□ -0.26
Msh3-202ENSMUST00000185852 Pes1Q9EQ61 584 aaKnown RBP13.45□□□□□ -0.26
Msh3-202ENSMUST00000185852 Cnnm1Q0GA42 951 aa13.45□□□□□ -0.26
Msh3-202ENSMUST00000185852 Sf3b2Q3UJB0 878 aaKnown RBP13.45□□□□□ -0.26
Msh3-202ENSMUST00000185852 Ccdc155Q80VJ8 648 aa13.45□□□□□ -0.26
Msh3-202ENSMUST00000185852 Prrc2bQ7TPM1 1486 aaKnown RBP13.45□□□□□ -0.26
Msh3-202ENSMUST00000185852 Cfap65Q3V0B4 1847 aa13.45□□□□□ -0.26
Msh3-202ENSMUST00000185852 Nol10Q5RJG1 687 aaKnown RBP13.45□□□□□ -0.26
Msh3-202ENSMUST00000185852 Zpr1Q62384 459 aa13.45□□□□□ -0.26
Msh3-202ENSMUST00000185852 Dnai1Q8C0M8 701 aa13.44□□□□□ -0.26
Msh3-202ENSMUST00000185852 Lrrc9Q8CDN9 1456 aa13.44□□□□□ -0.26
Msh3-202ENSMUST00000185852 Ttll13A4Q9F6 804 aa13.44□□□□□ -0.26
Msh3-202ENSMUST00000185852 AU022751B1B0V2 589 aa13.44□□□□□ -0.26
Msh3-202ENSMUST00000185852 Mphosph10Q810V0 681 aaKnown RBP13.44□□□□□ -0.26
Msh3-202ENSMUST00000185852 Neurod6P48986 337 aa13.43□□□□□ -0.26
Msh3-202ENSMUST00000185852 Cdc37l1Q9CZP7 335 aa13.43□□□□□ -0.26
Msh3-202ENSMUST00000185852 Ipo8Q7TMY7 1010 aa13.42□□□□□ -0.26
Msh3-202ENSMUST00000185852 Amotl2Q8K371 772 aa13.42□□□□□ -0.26
Msh3-202ENSMUST00000185852 CatipB9EKE5 520 aa13.42□□□□□ -0.26
Msh3-202ENSMUST00000185852 Peg3Q3URU2 1571 aa13.42□□□□□ -0.26
Msh3-202ENSMUST00000185852 Camsap2Q8C1B1 1461 aa13.42□□□□□ -0.26
Msh3-202ENSMUST00000185852 Sugp2Q8CH09 1067 aa13.42□□□□□ -0.26
Msh3-202ENSMUST00000185852 Ak7Q9D2H2 614 aa13.42□□□□□ -0.26
Msh3-202ENSMUST00000185852 Abcc6Q9R1S7 1498 aa13.42□□□□□ -0.26
Msh3-202ENSMUST00000185852 MecomP14404 1042 aa13.42□□□□□ -0.26
Msh3-202ENSMUST00000185852 Plekhh1Q80TI1 1356 aa13.41□□□□□ -0.26
Msh3-202ENSMUST00000185852 Snap23O09044 210 aa13.41□□□□□ -0.26
Msh3-202ENSMUST00000185852 Exoc6bA6H5Z3 810 aa13.41□□□□□ -0.26
Msh3-202ENSMUST00000185852 Gm21663A0A0G2JE01 267 aa13.4□□□□□ -0.26
Msh3-202ENSMUST00000185852 Gm7361D3Z6R1 267 aa13.4□□□□□ -0.26
Msh3-202ENSMUST00000185852 5031410I06RikE9Q4E0 267 aa13.4□□□□□ -0.26
Msh3-202ENSMUST00000185852 Gm1979E9QAN3 267 aa13.4□□□□□ -0.26
Msh3-202ENSMUST00000185852 Gm5862K7N5V5 267 aa13.4□□□□□ -0.26
Msh3-202ENSMUST00000185852 Gm10220K7N660 267 aa13.4□□□□□ -0.26
Msh3-202ENSMUST00000185852 PtprgQ05909 1442 aa13.4□□□□□ -0.26
Msh3-202ENSMUST00000185852 Dennd4bQ3U1Y4 1499 aa13.4□□□□□ -0.26
Msh3-202ENSMUST00000185852 SphkapQ6NSW3 1687 aa13.4□□□□□ -0.26
Msh3-202ENSMUST00000185852 Rfx1P48377 963 aa13.4□□□□□ -0.26
Msh3-202ENSMUST00000185852 Maco1Q7TQE6 664 aaKnown RBP13.4□□□□□ -0.26
Msh3-202ENSMUST00000185852 Dixdc1Q80Y83 711 aa13.4□□□□□ -0.26
Msh3-202ENSMUST00000185852 Mroh2aD3Z750 1679 aa13.39□□□□□ -0.27
Msh3-202ENSMUST00000185852 Ccdc27Q3V036 639 aa13.39□□□□□ -0.27
Msh3-202ENSMUST00000185852 Eif4g2Q62448 906 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms