RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 Atp2b3Q0VF55 1220 aa12.71□□□□□ -0.38
Ctc1-202ENSMUST00000116359 NcapgE9PWG6 1004 aa12.7□□□□□ -0.38
Ctc1-202ENSMUST00000116359 Inpp5dQ9ES52 1191 aa12.7□□□□□ -0.38
Ctc1-202ENSMUST00000116359 RalgapbQ8BQZ4 1484 aa12.7□□□□□ -0.38
Ctc1-202ENSMUST00000116359 Chmp4cQ9D7F7 232 aa12.7□□□□□ -0.38
Ctc1-202ENSMUST00000116359 Dmrtc1Q9D9R7 182 aa12.69□□□□□ -0.38
Ctc1-202ENSMUST00000116359 Lrrc9Q8CDN9 1456 aa12.69□□□□□ -0.38
Ctc1-202ENSMUST00000116359 Clasp1Q80TV8 1535 aaKnown RBP12.69□□□□□ -0.38
Ctc1-202ENSMUST00000116359 Lmtk2Q3TYD6 1471 aa12.68□□□□□ -0.38
Ctc1-202ENSMUST00000116359 Gpatch8A2A6A1 1505 aa12.68□□□□□ -0.38
Ctc1-202ENSMUST00000116359 Fndc1E9Q043 1732 aa12.68□□□□□ -0.38
Ctc1-202ENSMUST00000116359 Tex14Q7M6U3 1450 aa12.68□□□□□ -0.38
Ctc1-202ENSMUST00000116359 Znf521Q6KAS7 1311 aa12.68□□□□□ -0.38
Ctc1-202ENSMUST00000116359 Plch2A2AP18 1501 aa12.67□□□□□ -0.38
Ctc1-202ENSMUST00000116359 Mindy4Q3UQI9 744 aa12.67□□□□□ -0.38
Ctc1-202ENSMUST00000116359 Gas2l2Q5SSG4 860 aa12.67□□□□□ -0.38
Ctc1-202ENSMUST00000116359 Ecm2Q5FW85 670 aa12.66□□□□□ -0.38
Ctc1-202ENSMUST00000116359 AcrbpQ3V140 540 aa12.66□□□□□ -0.38
Ctc1-202ENSMUST00000116359 Bms1Q6PGF5 1284 aaKnown RBP12.66□□□□□ -0.38
Ctc1-202ENSMUST00000116359 Zfyve16Q80U44 1528 aa12.66□□□□□ -0.38
Ctc1-202ENSMUST00000116359 Cluap1Q8R3P7 413 aa12.65□□□□□ -0.38
Ctc1-202ENSMUST00000116359 Grpel1Q99LP6 217 aa12.65□□□□□ -0.38
Ctc1-202ENSMUST00000116359 PrxO55103 1391 aa12.65□□□□□ -0.38
Ctc1-202ENSMUST00000116359 Phlpp2Q8BXA7 1320 aa12.65□□□□□ -0.39
Ctc1-202ENSMUST00000116359 FanciQ8K368 1330 aa12.65□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Tubgcp6G5E8P0 1769 aa12.64□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Trim58Q5NCC9 485 aa12.64□□□□□ -0.39
Ctc1-202ENSMUST00000116359 ScaperF8VQ70 1398 aaKnown RBP12.64□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Ercc6lQ8BHK9 1240 aa12.63□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Zscan10Q3URR7 782 aa12.63□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Ppp2r1aQ76MZ3 589 aa12.63□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Bloc1s4Q8VED2 215 aa12.63□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Kcnj4P52189 445 aa12.62□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Bag4Q8CI61 457 aa12.62□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Lamc1P02468 1607 aaKnown RBP12.62□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Zscan25B2RX31 543 aa12.62□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Rbm27Q5SFM8 1060 aaKnown RBP12.62□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Trak1Q6PD31 939 aa12.62□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Pip4k2bQ80XI4 416 aa12.62□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Magi1Q6RHR9 1471 aa12.62□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Polr3glQ8R0C0 218 aa12.61□□□□□ -0.39
Ctc1-202ENSMUST00000116359 4931400O07RikQ9D4M5 137 aa12.61□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Kdm5cP41230 1554 aa12.61□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Zfp251Q6PCX8 632 aa12.61□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Fancd2Q80V62 1450 aa12.61□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Rcan3Q9JKK0 239 aa12.61□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Abcc5Q9R1X5 1436 aa12.6□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Cald1E9QA15 768 aaKnown RBP12.6□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Mapkbp1Q6NS57 1503 aa12.6□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Serpina10Q8R121 448 aa12.6□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Rrbp1Q99PL5 1605 aaKnown RBP12.6□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Kif3aP28741 701 aa12.6□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Sh3bp1P55194 680 aa12.6□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Atl3Q91YH5 541 aa12.59□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Rrp7aQ9D1C9 280 aaKnown RBP12.59□□□□□ -0.39
Ctc1-202ENSMUST00000116359 NexmifQ5DTT1 1515 aa12.59□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Prdm4Q80V63 803 aa12.59□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Rnf214Q8BFU3 668 aaKnown RBP12.59□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Sart1Q9Z315 806 aaKnown RBP12.59□□□□□ -0.39
Ctc1-202ENSMUST00000116359 U2af2P26369 475 aaKnown RBP12.59□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Rbm42Q91V81 474 aaKnown RBP12.59□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Usp19Q3UJD6 1360 aa12.58□□□□□ -0.39
Ctc1-202ENSMUST00000116359 Gm10093D3YYI8 482 aa12.58□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Hdac1O09106 482 aaKnown RBP12.58□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Gcc2Q8CHG3 1679 aa12.58□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Ttll5Q8CHB8 1328 aa12.58□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Gm9992B2RWK3 458 aa12.58□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Rbm25B2RY56 838 aaKnown RBP12.58□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Ncbp1Q3UYV9 790 aaKnown RBP12.58□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Unc93aQ710D3 458 aa12.58□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Gtpbp4Q99ME9 634 aaKnown RBP12.58□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Ptgs1P22437 602 aa12.58□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Fam163aQ8CAA5 168 aa12.58□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Plekhh2Q8C115 1491 aa12.58□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Mlh3A0A1Y7VMP7 1443 aa12.58□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Ttc37F8VPK0 1563 aa12.58□□□□□ -0.4
Ctc1-202ENSMUST00000116359 AdgbG3UZ78 1657 aa12.57□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Tdrd9Q14BI7 1383 aa12.57□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Rasa1E9PYG6 1038 aa12.57□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Mkrn3Q60764 544 aa12.57□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Inpp5bQ8K337 993 aa12.56□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Tfip11Q9ERA6 838 aaKnown RBP12.56□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Arhgef11Q68FM7 1552 aa12.56□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Cpsf1Q9EPU4 1441 aaKnown RBP12.56□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Nfatc2ipO09130 412 aa12.56□□□□□ -0.4
Ctc1-202ENSMUST00000116359 ImpactO55091 318 aa12.56□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Cog6Q8R3I3 657 aa12.56□□□□□ -0.4
Ctc1-202ENSMUST00000116359 AlkP97793 1621 aa12.56□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Cavin1O54724 392 aa12.56□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Map7O88735 730 aa12.56□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Arhgap5P97393 1501 aa12.56□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Rab3gap2Q8BMG7 1366 aa12.55□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Syce3B5KM66 88 aa12.55□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Asxl1P59598 1514 aa12.55□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Kif18aQ91WD7 886 aa12.55□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Tarbp1E9Q368 1579 aa12.55□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Anp32cQ64G17 123 aa12.54□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Tmf1B9EKI3 1091 aa12.54□□□□□ -0.4
Ctc1-202ENSMUST00000116359 Supt6hQ62383 1726 aaKnown RBP12.54□□□□□ -0.4
Ctc1-202ENSMUST00000116359 GorabQ8BRM2 368 aa12.54□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms