RNA–Protein interactions for RNA: ENSMUST00000108364.7

Sptbn4-204, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-204ENSMUST00000108364 Nkx1-2P42580 305 aa19.4■□□□□ 0.7
Sptbn4-204ENSMUST00000108364 Crocc2F6XLV1 1638 aa19.39■□□□□ 0.69
Sptbn4-204ENSMUST00000108364 Wdr62Q3U3T8 1523 aa19.39■□□□□ 0.69
Sptbn4-204ENSMUST00000108364 Cavin4A2AMM0 362 aa19.39■□□□□ 0.69
Sptbn4-204ENSMUST00000108364 Nol12Q8BG17 217 aa19.39■□□□□ 0.69
Sptbn4-204ENSMUST00000108364 R3hcc1Q8BSI6 488 aa19.38■□□□□ 0.69
Sptbn4-204ENSMUST00000108364 Zkscan1Q8BGS3 561 aaKnown RBP19.37■□□□□ 0.69
Sptbn4-204ENSMUST00000108364 Slc4a10Q5DTL9 1118 aa19.37■□□□□ 0.69
Sptbn4-204ENSMUST00000108364 Tfip11Q9ERA6 838 aaKnown RBP19.37■□□□□ 0.69
Sptbn4-204ENSMUST00000108364 KinQ8K339 391 aa19.37■□□□□ 0.69
Sptbn4-204ENSMUST00000108364 Zmym4A2A791 1549 aaKnown RBP19.36■□□□□ 0.69
Sptbn4-204ENSMUST00000108364 Arhgap5P97393 1501 aa19.36■□□□□ 0.69
Sptbn4-204ENSMUST00000108364 Calcoco2A2A6M5 331 aa19.34■□□□□ 0.69
Sptbn4-204ENSMUST00000108364 Fez1Q8K0X8 392 aa19.34■□□□□ 0.69
Sptbn4-204ENSMUST00000108364 Kdm5bQ80Y84 1544 aa19.34■□□□□ 0.69
Sptbn4-204ENSMUST00000108364 Polr3gQ6NXY9 223 aa19.34■□□□□ 0.69
Sptbn4-204ENSMUST00000108364 Maco1Q7TQE6 664 aaKnown RBP19.34■□□□□ 0.69
Sptbn4-204ENSMUST00000108364 Gprasp1Q5U4C1 1347 aa19.34■□□□□ 0.69
Sptbn4-204ENSMUST00000108364 Nap1l3Q794H2 544 aa19.33■□□□□ 0.69
Sptbn4-204ENSMUST00000108364 Ccdc173A0JLY1 547 aa19.33■□□□□ 0.69
Sptbn4-204ENSMUST00000108364 Sox12Q04890 314 aa19.33■□□□□ 0.69
Sptbn4-204ENSMUST00000108364 Erbb3Q61526 1339 aa19.33■□□□□ 0.68
Sptbn4-204ENSMUST00000108364 Psme1P97371 249 aa19.33■□□□□ 0.68
Sptbn4-204ENSMUST00000108364 Pdia4P08003 638 aaKnown RBP19.32■□□□□ 0.68
Sptbn4-204ENSMUST00000108364 Hmox1P14901 289 aa19.32■□□□□ 0.68
Sptbn4-204ENSMUST00000108364 Cyp46a1Q9WVK8 500 aa19.32■□□□□ 0.68
Sptbn4-204ENSMUST00000108364 Sh3bgrQ9WUZ7 214 aa19.31■□□□□ 0.68
Sptbn4-204ENSMUST00000108364 Gpatch8A2A6A1 1505 aa19.31■□□□□ 0.68
Sptbn4-204ENSMUST00000108364 Samd1D3YXK1 519 aa19.3■□□□□ 0.68
Sptbn4-204ENSMUST00000108364 Gsto1O09131 240 aa19.3■□□□□ 0.68
Sptbn4-204ENSMUST00000108364 DmtnQ9WV69 405 aa19.3■□□□□ 0.68
Sptbn4-204ENSMUST00000108364 Mcm2P97310 904 aa19.3■□□□□ 0.68
Sptbn4-204ENSMUST00000108364 Txndc2Q6P902 515 aa19.3■□□□□ 0.68
Sptbn4-204ENSMUST00000108364 Znf326O88291 580 aa19.3■□□□□ 0.68
Sptbn4-204ENSMUST00000108364 Tpd52l1O54818 204 aa19.3■□□□□ 0.68
Sptbn4-204ENSMUST00000108364 Ccdc141E9Q8Q6 1531 aa19.29■□□□□ 0.68
Sptbn4-204ENSMUST00000108364 Map4k4P97820 1233 aaKnown RBP19.29■□□□□ 0.68
Sptbn4-204ENSMUST00000108364 Smc3Q9CW03 1217 aaKnown RBP19.29■□□□□ 0.68
Sptbn4-204ENSMUST00000108364 Terf2O35144 541 aa19.28■□□□□ 0.68
Sptbn4-204ENSMUST00000108364 Thoc2B1AZI6 1594 aaKnown RBP19.28■□□□□ 0.68
Sptbn4-204ENSMUST00000108364 Fam13bQ8K2H3 851 aa19.28■□□□□ 0.68
Sptbn4-204ENSMUST00000108364 Tmc1Q8R4P5 757 aa19.27■□□□□ 0.68
Sptbn4-204ENSMUST00000108364 Kif3aP28741 701 aa19.27■□□□□ 0.68
Sptbn4-204ENSMUST00000108364 DroshaQ5HZJ0 1373 aaKnown RBP19.27■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 BC005561E9Q5E2 1589 aa19.26■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Tomm22Q9CPQ3 142 aa19.26■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Duxf3A0A0N4SV92 674 aa19.26■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Mug2P28666 1451 aa19.26■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 CarsQ9ER72 831 aaKnown RBP19.25■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Sall3Q62255 1320 aa19.25■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Anapc15P60007 132 aa19.25■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Tbc1d32Q3URV1 1296 aa19.25■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Ccer1Q9CQL2 403 aa19.25■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 TnnQ80Z71 1560 aa19.25■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Mad1l1Q9WTX8 717 aaKnown RBP19.25■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 EzrP26040 586 aaKnown RBP19.24■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Gcc1Q9D4H2 778 aa19.24■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Phlpp2Q8BXA7 1320 aa19.24■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Olfml1Q8BSH2 233 aa19.24■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Erich3F6QRE9 1637 aa19.23■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 RalgapbQ8BQZ4 1484 aa19.23■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Atp2b2Q9R0K7 1198 aa19.23■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Magi1Q6RHR9 1471 aa19.23■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Taf3Q5HZG4 932 aa19.23■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Dixdc1Q80Y83 711 aa19.23■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Ncoa3O09000 1398 aa19.22■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Zkscan2G3X952 960 aa19.22■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Naip6Q9JIB6 1403 aa19.22■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Ppip5k2Q6ZQB6 1129 aa19.22■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Bicd2Q921C5 820 aa19.22■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Clstn1Q9EPL2 979 aa19.22■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Catsper2A2ARP9 588 aa19.21■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Syce3B5KM66 88 aa19.21■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Tceal9Q9DD24 104 aa19.21■□□□□ 0.67
Sptbn4-204ENSMUST00000108364 Uspl1Q3ULM6 1089 aa19.2■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 Cabp4Q8VHC5 271 aa19.2■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 MvpQ9EQK5 861 aa19.2■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 Kdm2bQ6P1G2 1309 aa19.2■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 Eif4g1Q6NZJ6 1600 aaKnown RBP19.2■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 Usp48Q3V0C5 1052 aa19.2■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 Erc2Q6PH08 957 aa19.2■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 Plb1Q3TTY0 1478 aa19.2■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 NexnQ7TPW1 607 aa19.2■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 Fam135aQ6NS59 1506 aa19.2■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 Sv2bQ8BG39 683 aa19.2■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 Rab11fip3Q8CHD8 1047 aa19.19■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 Hs1bp3Q3TC93 395 aa19.19■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 Cdc37l1Q9CZP7 335 aa19.19■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 Map7d2A2AG50 781 aa19.19■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 Babam1Q3UI43 333 aa19.19■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 AnlnQ8K298 1121 aaKnown RBP19.19■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 Ints3Q7TPD0 1041 aaKnown RBP19.18■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 Wdr7Q920I9 1489 aa19.18■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 Q9D9H8 365 aa19.17■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 Grin2aP35436 1464 aa19.16■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 PalmQ9Z0P4 383 aa19.16■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 Wwc1Q5SXA9 1104 aa19.16■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 Cabp2Q9JLK4 216 aa19.16■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 Arhgef12Q8R4H2 1543 aaKnown RBP19.15■□□□□ 0.66
Sptbn4-204ENSMUST00000108364 Aldh1l1Q8R0Y6 902 aa19.15■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 10.7 ms