RNA–Protein interactions for RNA: ENSMUST00000106789.7

Trim3-202, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 2,841 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-202ENSMUST00000106789 Nphp4P59240 1425 aa28,03■■■□□ 2,08
Trim3-202ENSMUST00000106789 Tmc1Q8R4P5 757 aa28,03■■■□□ 2,08
Trim3-202ENSMUST00000106789 Map4k4P97820 1233 aaKnown RBP28,02■■■□□ 2,08
Trim3-202ENSMUST00000106789 Gprasp1Q5U4C1 1347 aa28,02■■■□□ 2,08
Trim3-202ENSMUST00000106789 KarsQ99MN1 595 aaKnown RBP28,02■■■□□ 2,08
Trim3-202ENSMUST00000106789 GsdmaQ9EST1 446 aa28,02■■■□□ 2,08
Trim3-202ENSMUST00000106789 Puf60Q3UEB3 564 aaKnown RBP28,01■■■□□ 2,07
Trim3-202ENSMUST00000106789 Cep152A2AUM9 1736 aaKnown RBP28,01■■■□□ 2,07
Trim3-202ENSMUST00000106789 Pdlim2Q8R1G6 349 aa28■■■□□ 2,07
Trim3-202ENSMUST00000106789 P2rx7Q9Z1M0 595 aa27,99■■■□□ 2,07
Trim3-202ENSMUST00000106789 Myo5cE9Q1F5 1742 aa27,98■■■□□ 2,07
Trim3-202ENSMUST00000106789 AatkQ80YE4 1365 aa27,98■■■□□ 2,07
Trim3-202ENSMUST00000106789 Myom1Q62234 1667 aaKnown RBP27,96■■■□□ 2,07
Trim3-202ENSMUST00000106789 Ksr2Q3UVC0 959 aa27,96■■■□□ 2,07
Trim3-202ENSMUST00000106789 Myom2Q14BI5 1463 aa27,96■■■□□ 2,07
Trim3-202ENSMUST00000106789 Apaf1O88879 1249 aa27,95■■■□□ 2,06
Trim3-202ENSMUST00000106789 Stag3O70576 1240 aa27,95■■■□□ 2,06
Trim3-202ENSMUST00000106789 IbtkQ6ZPR6 1352 aaKnown RBP27,94■■■□□ 2,06
Trim3-202ENSMUST00000106789 Ppp2r3aB2RXC8 1150 aa27,94■■■□□ 2,06
Trim3-202ENSMUST00000106789 Rims1Q99NE5 1463 aa27,92■■■□□ 2,06
Trim3-202ENSMUST00000106789 Htatsf1Q8BGC0 757 aa27,92■■■□□ 2,06
Trim3-202ENSMUST00000106789 Talpid3E9PV87 1520 aa27,92■■■□□ 2,06
Trim3-202ENSMUST00000106789 Abca6Q8K441 1624 aa27,92■■■□□ 2,06
Trim3-202ENSMUST00000106789 Lemd3Q9WU40 921 aa27,91■■■□□ 2,06
Trim3-202ENSMUST00000106789 Iqgap3F8VQ29 1632 aa27,91■■■□□ 2,06
Trim3-202ENSMUST00000106789 Chd1P40201 1711 aa27,89■■■□□ 2,06
Trim3-202ENSMUST00000106789 U2af1Q9D883 239 aaKnown RBP27,89■■■□□ 2,06
Trim3-202ENSMUST00000106789 Nos1Q9Z0J4 1429 aa27,89■■■□□ 2,06
Trim3-202ENSMUST00000106789 Cdk5rap2Q8K389 1822 aa27,89■■■□□ 2,06
Trim3-202ENSMUST00000106789 Fam135bQ9DAI6 1403 aa27,88■■■□□ 2,05
Trim3-202ENSMUST00000106789 Cald1E9QA15 768 aaKnown RBP27,88■■■□□ 2,05
Trim3-202ENSMUST00000106789 Sptbn5F6UCX4 1208 aa27,88■■■□□ 2,05
Trim3-202ENSMUST00000106789 Scaf11E9PZM7 1456 aaKnown RBP27,87■■■□□ 2,05
Trim3-202ENSMUST00000106789 Tnpo1Q8BFY9 898 aaKnown RBP27,87■■■□□ 2,05
Trim3-202ENSMUST00000106789 Cluap1Q8R3P7 413 aa27,87■■■□□ 2,05
Trim3-202ENSMUST00000106789 Pnmal2G3X9N3 661 aa27,87■■■□□ 2,05
Trim3-202ENSMUST00000106789 Ipo4Q8VI75 1082 aa27,86■■■□□ 2,05
Trim3-202ENSMUST00000106789 Fndc1E9Q043 1732 aa27,85■■■□□ 2,05
Trim3-202ENSMUST00000106789 Iqsec2Q5DU25 1478 aa27,85■■■□□ 2,05
Trim3-202ENSMUST00000106789 Arid3cA6PWV5 409 aa27,85■■■□□ 2,05
Trim3-202ENSMUST00000106789 Tsen2Q6P7W5 460 aa27,85■■■□□ 2,05
Trim3-202ENSMUST00000106789 Zfyve16Q80U44 1528 aa27,84■■■□□ 2,05
Trim3-202ENSMUST00000106789 Ppp1r3fQ9JIG4 799 aa27,84■■■□□ 2,05
Trim3-202ENSMUST00000106789 Abca8aQ8K442 1620 aa27,83■■■□□ 2,05
Trim3-202ENSMUST00000106789 Tmem131lQ3U3D7 1597 aa27,82■■■□□ 2,04
Trim3-202ENSMUST00000106789 Spryd3E9Q9B3 442 aa27,82■■■□□ 2,04
Trim3-202ENSMUST00000106789 AampJ3QN89 436 aa27,82■■■□□ 2,04
Trim3-202ENSMUST00000106789 Ccar1Q8CH18 1146 aaKnown RBP27,82■■■□□ 2,04
Trim3-202ENSMUST00000106789 Rangap1P46061 589 aaKnown RBP27,81■■■□□ 2,04
Trim3-202ENSMUST00000106789 Fgd1P52734 960 aa27,81■■■□□ 2,04
Trim3-202ENSMUST00000106789 Znf518aB2RRF6 1478 aaKnown RBP27,8■■■□□ 2,04
Trim3-202ENSMUST00000106789 Efcab6Q6P1E8 1516 aa27,8■■■□□ 2,04
Trim3-202ENSMUST00000106789 Rabep1O35551 862 aa27,8■■■□□ 2,04
Trim3-202ENSMUST00000106789 Igf1rQ60751 1373 aa27,79■■■□□ 2,04
Trim3-202ENSMUST00000106789 DnmbpQ6TXD4 1580 aa27,79■■■□□ 2,04
Trim3-202ENSMUST00000106789 KdrP35918 1367 aa27,78■■■□□ 2,04
Trim3-202ENSMUST00000106789 Tbc1d32Q3URV1 1296 aa27,78■■■□□ 2,04
Trim3-202ENSMUST00000106789 Adgrb3Q80ZF8 1522 aa27,77■■■□□ 2,04
Trim3-202ENSMUST00000106789 IqubQ8CDK3 788 aa27,77■■■□□ 2,04
Trim3-202ENSMUST00000106789 Uggt1Q6P5E4 1551 aa27,76■■■□□ 2,04
Trim3-202ENSMUST00000106789 Mfap1aC0HKD8 439 aaKnown RBP27,76■■■□□ 2,03
Trim3-202ENSMUST00000106789 Mfap1bC0HKD9 439 aaKnown RBP27,76■■■□□ 2,03
Trim3-202ENSMUST00000106789 Atl3Q91YH5 541 aa27,76■■■□□ 2,03
Trim3-202ENSMUST00000106789 Dusp27Q148W8 1138 aa27,75■■■□□ 2,03
Trim3-202ENSMUST00000106789 AU022751B1B0V2 589 aa27,73■■■□□ 2,03
Trim3-202ENSMUST00000106789 InsrP15208 1372 aa27,73■■■□□ 2,03
Trim3-202ENSMUST00000106789 Prex1Q69ZK0 1650 aa27,72■■■□□ 2,03
Trim3-202ENSMUST00000106789 Abca9Q8K449 1623 aa27,71■■■□□ 2,03
Trim3-202ENSMUST00000106789 Exosc9Q9JHI7 438 aaKnown RBP27,71■■■□□ 2,03
Trim3-202ENSMUST00000106789 Znf330Q922H9 316 aa27,71■■■□□ 2,03
Trim3-202ENSMUST00000106789 PalldQ9ET54 1408 aa27,71■■■□□ 2,03
Trim3-202ENSMUST00000106789 CenpjQ569L8 1344 aa27,7■■■□□ 2,02
Trim3-202ENSMUST00000106789 Zranb1Q7M760 708 aa27,69■■■□□ 2,02
Trim3-202ENSMUST00000106789 Ehbp1l1Q99MS7 1716 aa27,69■■■□□ 2,02
Trim3-202ENSMUST00000106789 Phlpp2Q8BXA7 1320 aa27,69■■■□□ 2,02
Trim3-202ENSMUST00000106789 AU019823E9PUQ3 292 aa27,68■■■□□ 2,02
Trim3-202ENSMUST00000106789 Sipa1l1Q8C0T5 1782 aa27,68■■■□□ 2,02
Trim3-202ENSMUST00000106789 Skint5A7XUY5 1461 aa27,67■■■□□ 2,02
Trim3-202ENSMUST00000106789 Lrrc7Q80TE7 1490 aa27,67■■■□□ 2,02
Trim3-202ENSMUST00000106789 Stk26Q99JT2 416 aa27,67■■■□□ 2,02
Trim3-202ENSMUST00000106789 Hfm1D3Z4R1 1434 aa27,66■■■□□ 2,02
Trim3-202ENSMUST00000106789 Antxr1Q9CZ52 562 aa27,65■■■□□ 2,02
Trim3-202ENSMUST00000106789 Dnttip2Q8R2M2 758 aaKnown RBP27,64■■■□□ 2,02
Trim3-202ENSMUST00000106789 Ythdc2B2RR83 1445 aaKnown RBP27,64■■■□□ 2,01
Trim3-202ENSMUST00000106789 Trpm1Q2TV84 1622 aa27,64■■■□□ 2,01
Trim3-202ENSMUST00000106789 Adgrl3Q80TS3 1537 aa27,63■■■□□ 2,01
Trim3-202ENSMUST00000106789 Catsper2A2ARP9 588 aa27,62■■■□□ 2,01
Trim3-202ENSMUST00000106789 Ecm2Q5FW85 670 aa27,62■■■□□ 2,01
Trim3-202ENSMUST00000106789 Ccdc60Q8C4J0 545 aa27,62■■■□□ 2,01
Trim3-202ENSMUST00000106789 MaddQ80U28 1577 aa27,61■■■□□ 2,01
Trim3-202ENSMUST00000106789 CastP51125 788 aa27,61■■■□□ 2,01
Trim3-202ENSMUST00000106789 Maco1Q7TQE6 664 aaKnown RBP27,61■■■□□ 2,01
Trim3-202ENSMUST00000106789 Map7O88735 730 aa27,6■■■□□ 2,01
Trim3-202ENSMUST00000106789 Adgrl1Q80TR1 1466 aa27,59■■■□□ 2,01
Trim3-202ENSMUST00000106789 Atp1b4Q99ME6 356 aa27,59■■■□□ 2,01
Trim3-202ENSMUST00000106789 AU015836B2RUM3 263 aa27,58■■■□□ 2,01
Trim3-202ENSMUST00000106789 Nutm1Q8BHP2 1126 aa27,58■■■□□ 2,01
Trim3-202ENSMUST00000106789 Kif18aQ91WD7 886 aa27,58■■■□□ 2,01
Trim3-202ENSMUST00000106789 Kif2cQ922S8 721 aa27,57■■■□□ 2
Trim3-202ENSMUST00000106789 Ttc37F8VPK0 1563 aa27,56■■■□□ 2
Retrieved 100 of 22,080 RNA–protein pairs in 13,6 ms