RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Ift57Q8BXG3 429 aa12.31□□□□□ -0.44
Lig4-201ENSMUST00000095476 Rab3gap2Q8BMG7 1366 aa12.31□□□□□ -0.44
Lig4-201ENSMUST00000095476 Kcnj4P52189 445 aa12.31□□□□□ -0.44
Lig4-201ENSMUST00000095476 Rufy1Q8BIJ7 712 aa12.31□□□□□ -0.44
Lig4-201ENSMUST00000095476 Spag5Q7TME2 1165 aa12.31□□□□□ -0.44
Lig4-201ENSMUST00000095476 Anapc15-psA0A140T8L6 141 aa12.31□□□□□ -0.44
Lig4-201ENSMUST00000095476 Tpm4Q6IRU2 248 aa12.31□□□□□ -0.44
Lig4-201ENSMUST00000095476 Dhx8A2A4P0 1244 aaKnown RBP12.3□□□□□ -0.44
Lig4-201ENSMUST00000095476 Frmd3Q8BHD4 595 aa12.3□□□□□ -0.44
Lig4-201ENSMUST00000095476 Ccdc94Q9D6J3 314 aa12.3□□□□□ -0.44
Lig4-201ENSMUST00000095476 Wdr78E9PYY5 807 aa12.3□□□□□ -0.44
Lig4-201ENSMUST00000095476 Pibf1E9Q6K3 756 aa12.3□□□□□ -0.44
Lig4-201ENSMUST00000095476 Tmem132aQ922P8 1018 aa12.3□□□□□ -0.44
Lig4-201ENSMUST00000095476 Ipo7Q9EPL8 1038 aaKnown RBP12.3□□□□□ -0.44
Lig4-201ENSMUST00000095476 Stk26Q99JT2 416 aa12.3□□□□□ -0.44
Lig4-201ENSMUST00000095476 Naip1Q9QWK5 1403 aa12.3□□□□□ -0.44
Lig4-201ENSMUST00000095476 Usp48Q3V0C5 1052 aa12.29□□□□□ -0.44
Lig4-201ENSMUST00000095476 NexnQ7TPW1 607 aa12.29□□□□□ -0.44
Lig4-201ENSMUST00000095476 Q8BT18 775 aa12.29□□□□□ -0.44
Lig4-201ENSMUST00000095476 Terf2O35144 541 aa12.29□□□□□ -0.44
Lig4-201ENSMUST00000095476 Fan1Q69ZT1 1020 aa12.29□□□□□ -0.44
Lig4-201ENSMUST00000095476 Cyp46a1Q9WVK8 500 aa12.29□□□□□ -0.44
Lig4-201ENSMUST00000095476 Dhx57Q6P5D3 1388 aaKnown RBP12.29□□□□□ -0.44
Lig4-201ENSMUST00000095476 Ccdc102aQ3TMW1 549 aa12.29□□□□□ -0.44
Lig4-201ENSMUST00000095476 AcrbpQ3V140 540 aa12.29□□□□□ -0.44
Lig4-201ENSMUST00000095476 Cux1P53564 1515 aa12.29□□□□□ -0.44
Lig4-201ENSMUST00000095476 Ccdc171E9Q1U1 1324 aa12.29□□□□□ -0.44
Lig4-201ENSMUST00000095476 Slc4a10Q5DTL9 1118 aa12.29□□□□□ -0.44
Lig4-201ENSMUST00000095476 Sass6Q80UK7 654 aa12.29□□□□□ -0.44
Lig4-201ENSMUST00000095476 Rec8Q8C5S7 591 aa12.29□□□□□ -0.44
Lig4-201ENSMUST00000095476 Ccdc83Q9D4V3 305 aa12.29□□□□□ -0.44
Lig4-201ENSMUST00000095476 ScaperF8VQ70 1398 aaKnown RBP12.28□□□□□ -0.44
Lig4-201ENSMUST00000095476 Med4Q9CQA5 270 aa12.28□□□□□ -0.44
Lig4-201ENSMUST00000095476 Tnnt1O88346 262 aa12.28□□□□□ -0.44
Lig4-201ENSMUST00000095476 Rnf20Q5DTM8 973 aa12.28□□□□□ -0.44
Lig4-201ENSMUST00000095476 Urb2E9Q7L1 1524 aaKnown RBP12.28□□□□□ -0.44
Lig4-201ENSMUST00000095476 Clcn1Q64347 994 aa12.28□□□□□ -0.44
Lig4-201ENSMUST00000095476 CenpjQ569L8 1344 aa12.28□□□□□ -0.44
Lig4-201ENSMUST00000095476 A0A1L1SQF0 893 aa12.28□□□□□ -0.44
Lig4-201ENSMUST00000095476 Rbm25B2RY56 838 aaKnown RBP12.28□□□□□ -0.44
Lig4-201ENSMUST00000095476 Trap1aP19473 224 aa12.28□□□□□ -0.44
Lig4-201ENSMUST00000095476 Nutm1Q8BHP2 1126 aa12.28□□□□□ -0.44
Lig4-201ENSMUST00000095476 Ric3Q8BPM6 367 aa12.28□□□□□ -0.44
Lig4-201ENSMUST00000095476 NgefQ8CHT1 710 aa12.28□□□□□ -0.44
Lig4-201ENSMUST00000095476 Hnrnpul1Q8VDM6 859 aaKnown RBP12.28□□□□□ -0.44
Lig4-201ENSMUST00000095476 Tfip11Q9ERA6 838 aaKnown RBP12.28□□□□□ -0.44
Lig4-201ENSMUST00000095476 Cavin1O54724 392 aa12.27□□□□□ -0.44
Lig4-201ENSMUST00000095476 Cc2d1aQ8K1A6 943 aa12.27□□□□□ -0.44
Lig4-201ENSMUST00000095476 Hmox1P14901 289 aa12.27□□□□□ -0.45
Lig4-201ENSMUST00000095476 Nkx1-2P42580 305 aa12.27□□□□□ -0.45
Lig4-201ENSMUST00000095476 Tspyl2Q7TQI8 677 aa12.27□□□□□ -0.45
Lig4-201ENSMUST00000095476 Gcc1Q9D4H2 778 aa12.27□□□□□ -0.45
Lig4-201ENSMUST00000095476 4931400O07RikQ9D4M5 137 aa12.27□□□□□ -0.45
Lig4-201ENSMUST00000095476 Kif3cO35066 796 aa12.26□□□□□ -0.45
Lig4-201ENSMUST00000095476 Dnaaf4Q8R368 420 aa12.26□□□□□ -0.45
Lig4-201ENSMUST00000095476 Thoc2B1AZI6 1594 aaKnown RBP12.26□□□□□ -0.45
Lig4-201ENSMUST00000095476 Pmfbp1Q9WVQ0 1022 aa12.26□□□□□ -0.45
Lig4-201ENSMUST00000095476 Arap1Q4LDD4 1452 aa12.26□□□□□ -0.45
Lig4-201ENSMUST00000095476 Arid3cA6PWV5 409 aa12.26□□□□□ -0.45
Lig4-201ENSMUST00000095476 Zkscan2G3X952 960 aa12.26□□□□□ -0.45
Lig4-201ENSMUST00000095476 Ddx11Q6AXC6 880 aa12.26□□□□□ -0.45
Lig4-201ENSMUST00000095476 SrrtQ99MR6 875 aaKnown RBP12.26□□□□□ -0.45
Lig4-201ENSMUST00000095476 TnmdQ9EP64 317 aa12.26□□□□□ -0.45
Lig4-201ENSMUST00000095476 Nectin2P32507 530 aa12.25□□□□□ -0.45
Lig4-201ENSMUST00000095476 Plcd3Q8K2J0 785 aa12.25□□□□□ -0.45
Lig4-201ENSMUST00000095476 OptnQ8K3K8 584 aa12.25□□□□□ -0.45
Lig4-201ENSMUST00000095476 Erc2Q6PH08 957 aa12.25□□□□□ -0.45
Lig4-201ENSMUST00000095476 Usp40Q8BWR4 1235 aa12.25□□□□□ -0.45
Lig4-201ENSMUST00000095476 Chaf1aQ9QWF0 911 aa12.25□□□□□ -0.45
Lig4-201ENSMUST00000095476 A0A0U1RNP2 1173 aa12.25□□□□□ -0.45
Lig4-201ENSMUST00000095476 Stk31Q99MW1 1018 aa12.25□□□□□ -0.45
Lig4-201ENSMUST00000095476 Gnai1B2RSH2 354 aa12.24□□□□□ -0.45
Lig4-201ENSMUST00000095476 Lekr1B2RVN1 116 aa12.24□□□□□ -0.45
Lig4-201ENSMUST00000095476 Arid4aF8VPQ2 1261 aaKnown RBP12.24□□□□□ -0.45
Lig4-201ENSMUST00000095476 Gnai3Q9DC51 354 aa12.24□□□□□ -0.45
Lig4-201ENSMUST00000095476 Gm45140A0A0N4SUM8 220 aa12.24□□□□□ -0.45
Lig4-201ENSMUST00000095476 Map9Q3TRR0 646 aa12.24□□□□□ -0.45
Lig4-201ENSMUST00000095476 Bag4Q8CI61 457 aa12.24□□□□□ -0.45
Lig4-201ENSMUST00000095476 Tceal9Q9DD24 104 aa12.24□□□□□ -0.45
Lig4-201ENSMUST00000095476 Ncoa1P70365 1447 aa12.23□□□□□ -0.45
Lig4-201ENSMUST00000095476 Arhgef5E9Q7D5 1581 aa12.23□□□□□ -0.45
Lig4-201ENSMUST00000095476 Tbc1d32Q3URV1 1296 aa12.23□□□□□ -0.45
Lig4-201ENSMUST00000095476 Gtpbp4Q99ME9 634 aaKnown RBP12.23□□□□□ -0.45
Lig4-201ENSMUST00000095476 Ift140E9PY46 1464 aa12.23□□□□□ -0.45
Lig4-201ENSMUST00000095476 Babam1Q3UI43 333 aa12.22□□□□□ -0.45
Lig4-201ENSMUST00000095476 Ppip5k2Q6ZQB6 1129 aa12.22□□□□□ -0.45
Lig4-201ENSMUST00000095476 Ccdc47Q9D024 483 aaKnown RBP12.22□□□□□ -0.45
Lig4-201ENSMUST00000095476 Swt1Q9DBQ9 907 aa12.22□□□□□ -0.45
Lig4-201ENSMUST00000095476 NefhP19246 1090 aa12.22□□□□□ -0.45
Lig4-201ENSMUST00000095476 Hs1bp3Q3TC93 395 aa12.22□□□□□ -0.45
Lig4-201ENSMUST00000095476 Samm50Q8BGH2 469 aa12.22□□□□□ -0.45
Lig4-201ENSMUST00000095476 Nup88Q8CEC0 753 aaKnown RBP12.22□□□□□ -0.45
Lig4-201ENSMUST00000095476 Fam193aQ8CGI1 1231 aaKnown RBP12.22□□□□□ -0.45
Lig4-201ENSMUST00000095476 Paxbp1P58501 919 aa12.21□□□□□ -0.45
Lig4-201ENSMUST00000095476 Nat10Q8K224 1024 aaKnown RBP12.21□□□□□ -0.45
Lig4-201ENSMUST00000095476 Dctn1O08788 1281 aa12.21□□□□□ -0.45
Lig4-201ENSMUST00000095476 Cplx2P84086 134 aa12.21□□□□□ -0.45
Lig4-201ENSMUST00000095476 Utp14aQ640M1 767 aaKnown RBP12.21□□□□□ -0.45
Lig4-201ENSMUST00000095476 Usp16Q99LG0 825 aa12.21□□□□□ -0.45
Lig4-201ENSMUST00000095476 Top2aQ01320 1528 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms