RNA–Protein interactions for RNA: ENSMUST00000088355.11

Col2a1-202, Transcript of Collagen alpha-1(II) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col2a1, Length 4,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-202ENSMUST00000088355 Neurod6P48986 337 aa17.41■□□□□ 0.38
Col2a1-202ENSMUST00000088355 Rsph3aQ3UFY4 516 aa17.4■□□□□ 0.38
Col2a1-202ENSMUST00000088355 MpripP97434 1024 aa17.4■□□□□ 0.38
Col2a1-202ENSMUST00000088355 Pank1Q8K4K6 548 aa17.4■□□□□ 0.38
Col2a1-202ENSMUST00000088355 Atp10dQ8K2X1 1416 aa17.4■□□□□ 0.38
Col2a1-202ENSMUST00000088355 CrcpO35427 148 aa17.4■□□□□ 0.38
Col2a1-202ENSMUST00000088355 Nutm1Q8BHP2 1126 aa17.4■□□□□ 0.38
Col2a1-202ENSMUST00000088355 Evc2Q8K1G2 1220 aa17.4■□□□□ 0.38
Col2a1-202ENSMUST00000088355 Dnajc5bQ9CQ94 199 aa17.4■□□□□ 0.38
Col2a1-202ENSMUST00000088355 SlkO54988 1233 aa17.39■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Plekhh1Q80TI1 1356 aa17.39■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Plekhg5Q66T02 1073 aa17.39■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Tpd52l1O54818 204 aa17.38■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Cetn4Q8K4K1 168 aa17.38■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Abcc5Q9R1X5 1436 aa17.38■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Cnnm1Q0GA42 951 aa17.38■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Kif16bB1AVY7 1312 aa17.38■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Mphosph10Q810V0 681 aaKnown RBP17.38■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Gm21969J3QJZ1 289 aa17.37■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Rfx1P48377 963 aa17.37■□□□□ 0.37
Col2a1-202ENSMUST00000088355 BcanQ61361 883 aa17.37■□□□□ 0.37
Col2a1-202ENSMUST00000088355 UvssaQ9D479 717 aa17.37■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Q9D2X8 372 aa17.37■□□□□ 0.37
Col2a1-202ENSMUST00000088355 IbtkQ6ZPR6 1352 aaKnown RBP17.37■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Zeb2Q9R0G7 1215 aa17.37■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Apaf1O88879 1249 aa17.36■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Vps53Q8CCB4 832 aa17.36■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Ak7Q9D2H2 614 aa17.36■□□□□ 0.37
Col2a1-202ENSMUST00000088355 4930572O03RikQ8C5Y0 211 aa17.36■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Fbln2P37889 1221 aa17.36■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Sf3a1Q8K4Z5 791 aaKnown RBP17.36■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Srek1Q8BZX4 494 aaKnown RBP17.35■□□□□ 0.37
Col2a1-202ENSMUST00000088355 KinQ8K339 391 aa17.35■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Pcf11G3X9Z4 1553 aa17.34■□□□□ 0.37
Col2a1-202ENSMUST00000088355 MsnP26041 577 aaKnown RBP17.34■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Nap1l3Q794H2 544 aa17.34■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Naip2Q9QUK4 1447 aa17.34■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Phactr2B1AVP0 632 aa17.34■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Q3UJC8 639 aa17.33■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Stard3nlQ9DCI3 235 aa17.33■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Fchsd2Q3USJ8 740 aa17.33■□□□□ 0.37
Col2a1-202ENSMUST00000088355 Speer4bQ9D9F7 267 aa17.33■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Calcoco2A2A6M5 331 aa17.33■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Casq1O09165 405 aa17.33■□□□□ 0.36
Col2a1-202ENSMUST00000088355 RdxP26043 583 aaKnown RBP17.33■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Gm21680A0A0G2JGR8 267 aa17.32■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Krt82Q99M74 516 aa17.32■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Noc3lQ8VI84 807 aaKnown RBP17.32■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Kcnh5Q920E3 988 aa17.32■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Mcm2P97310 904 aa17.32■□□□□ 0.36
Col2a1-202ENSMUST00000088355 BccipQ9CWI3 316 aa17.31■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Sh3bgrQ9WUZ7 214 aa17.31■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Fkbp4P30416 458 aa17.31■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Rbm5Q91YE7 815 aaKnown RBP17.31■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Rfx7F8VPJ6 1459 aa17.3■□□□□ 0.36
Col2a1-202ENSMUST00000088355 KarsQ99MN1 595 aaKnown RBP17.3■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Glipr1l2Q9CQ35 332 aa17.3■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Gm21663A0A0G2JE01 267 aa17.3■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Gm7361D3Z6R1 267 aa17.3■□□□□ 0.36
Col2a1-202ENSMUST00000088355 5031410I06RikE9Q4E0 267 aa17.3■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Gm1979E9QAN3 267 aa17.3■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Gm5862K7N5V5 267 aa17.3■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Gm10220K7N660 267 aa17.3■□□□□ 0.36
Col2a1-202ENSMUST00000088355 VgfQ0VGU4 617 aa17.3■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Kri1Q8VDQ9 704 aaKnown RBP17.29■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Cabp2Q9JLK4 216 aa17.29■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Slc4a2P13808 1237 aaKnown RBP17.29■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Isy1Q69ZQ2 285 aaKnown RBP17.29■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Hmox1P14901 289 aa17.29■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Gm156Q58A37 223 aa17.29■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Fancd2Q80V62 1450 aa17.28■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Cspp1B2RX88 1205 aa17.28■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Chmp4cQ9D7F7 232 aa17.28■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Gpatch11Q3UFS4 262 aa17.28■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Cyp46a1Q9WVK8 500 aa17.28■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Ccp110Q7TSH4 1004 aa17.27■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Hap1O35668 628 aa17.27■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Dusp27Q148W8 1138 aa17.27■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Prkrip1Q9CWV6 186 aaKnown RBP17.27■□□□□ 0.36
Col2a1-202ENSMUST00000088355 Asxl1P59598 1514 aa17.27■□□□□ 0.35
Col2a1-202ENSMUST00000088355 Cplx1P63040 134 aa17.27■□□□□ 0.35
Col2a1-202ENSMUST00000088355 Eif3aP23116 1344 aaKnown RBP17.26■□□□□ 0.35
Col2a1-202ENSMUST00000088355 Eif3bQ8JZQ9 803 aaKnown RBP17.26■□□□□ 0.35
Col2a1-202ENSMUST00000088355 OptnQ8K3K8 584 aa17.26■□□□□ 0.35
Col2a1-202ENSMUST00000088355 Prl7d1P04769 244 aa17.25■□□□□ 0.35
Col2a1-202ENSMUST00000088355 Ythdc2B2RR83 1445 aaKnown RBP17.25■□□□□ 0.35
Col2a1-202ENSMUST00000088355 Zfp444Q3TDV8 331 aaKnown RBP17.25■□□□□ 0.35
Col2a1-202ENSMUST00000088355 Gnai2P08752 355 aaKnown RBP17.25■□□□□ 0.35
Col2a1-202ENSMUST00000088355 Flad1Q8R123 492 aa17.25■□□□□ 0.35
Col2a1-202ENSMUST00000088355 Nek4Q9Z1J2 792 aa17.24■□□□□ 0.35
Col2a1-202ENSMUST00000088355 Tpm3P21107 285 aaKnown RBP17.24■□□□□ 0.35
Col2a1-202ENSMUST00000088355 SkilQ60665 675 aa17.24■□□□□ 0.35
Col2a1-202ENSMUST00000088355 Cchcr1Q8K2I2 770 aa17.24■□□□□ 0.35
Col2a1-202ENSMUST00000088355 Larp1bA0A0A6YXJ7 370 aaKnown RBP17.24■□□□□ 0.35
Col2a1-202ENSMUST00000088355 Zkscan2G3X952 960 aa17.24■□□□□ 0.35
Col2a1-202ENSMUST00000088355 Hmgb2P30681 210 aaKnown RBP17.24■□□□□ 0.35
Col2a1-202ENSMUST00000088355 A0A1L1SQF0 893 aa17.23■□□□□ 0.35
Col2a1-202ENSMUST00000088355 Gm10563F6WIE4 79 aa17.23■□□□□ 0.35
Col2a1-202ENSMUST00000088355 PalmQ9Z0P4 383 aa17.23■□□□□ 0.35
Col2a1-202ENSMUST00000088355 Trim34aQ99PP6 485 aa17.23■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 63.8 ms