RNA–Protein interactions for RNA: ENSMUST00000087258.9

Tro-202, Transcript of Tro protein, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Tro, Length 6,559 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tro-202ENSMUST00000087258 Rab11fip3Q8CHD8 1047 aa13.23□□□□□ -0.29
Tro-202ENSMUST00000087258 Golim4Q8BXA1 655 aa13.22□□□□□ -0.29
Tro-202ENSMUST00000087258 Hmgn5Q9JL35 406 aa13.22□□□□□ -0.29
Tro-202ENSMUST00000087258 Erc1Q99MI1 1120 aa13.22□□□□□ -0.29
Tro-202ENSMUST00000087258 Trim30cD3YVI9 513 aa13.22□□□□□ -0.29
Tro-202ENSMUST00000087258 Psmd1Q3TXS7 953 aa13.22□□□□□ -0.29
Tro-202ENSMUST00000087258 CenphQ9QYM8 241 aa13.22□□□□□ -0.29
Tro-202ENSMUST00000087258 Erc2Q6PH08 957 aa13.21□□□□□ -0.29
Tro-202ENSMUST00000087258 Gtf3c3Q3TMP1 882 aa13.21□□□□□ -0.3
Tro-202ENSMUST00000087258 Tmx4Q8C0L0 335 aa13.21□□□□□ -0.3
Tro-202ENSMUST00000087258 SelenooQ9DBC0 667 aa13.21□□□□□ -0.3
Tro-202ENSMUST00000087258 Evi5lH3BKQ3 813 aa13.2□□□□□ -0.3
Tro-202ENSMUST00000087258 Cnnm1Q0GA42 951 aa13.2□□□□□ -0.3
Tro-202ENSMUST00000087258 Znf697Q569E7 569 aa13.2□□□□□ -0.3
Tro-202ENSMUST00000087258 Lrrcc1Q69ZB0 1026 aa13.2□□□□□ -0.3
Tro-202ENSMUST00000087258 Fam13bQ8K2H3 851 aa13.2□□□□□ -0.3
Tro-202ENSMUST00000087258 Ak7Q9D2H2 614 aa13.2□□□□□ -0.3
Tro-202ENSMUST00000087258 Nol7Q9D7Z3 254 aaKnown RBP13.2□□□□□ -0.3
Tro-202ENSMUST00000087258 Zranb3Q6NZP1 1069 aa13.2□□□□□ -0.3
Tro-202ENSMUST00000087258 Slc13a4Q8BZ82 625 aa13.2□□□□□ -0.3
Tro-202ENSMUST00000087258 Fmnl2A2APV2 1086 aa13.2□□□□□ -0.3
Tro-202ENSMUST00000087258 ItpripQ3TNL8 555 aa13.19□□□□□ -0.3
Tro-202ENSMUST00000087258 TbcaP48428 108 aaKnown RBP13.19□□□□□ -0.3
Tro-202ENSMUST00000087258 Cetn4Q8K4K1 168 aa13.19□□□□□ -0.3
Tro-202ENSMUST00000087258 NefhP19246 1090 aa13.18□□□□□ -0.3
Tro-202ENSMUST00000087258 Sv2bQ8BG39 683 aa13.18□□□□□ -0.3
Tro-202ENSMUST00000087258 Sart1Q9Z315 806 aaKnown RBP13.18□□□□□ -0.3
Tro-202ENSMUST00000087258 CntlnA2AM05 1397 aa13.18□□□□□ -0.3
Tro-202ENSMUST00000087258 Gsdma3Q5Y4Y6 464 aa13.18□□□□□ -0.3
Tro-202ENSMUST00000087258 Serpina10Q8R121 448 aa13.18□□□□□ -0.3
Tro-202ENSMUST00000087258 Lrrfip2Q91WK0 415 aa13.18□□□□□ -0.3
Tro-202ENSMUST00000087258 CalrP14211 416 aaKnown RBP13.17□□□□□ -0.3
Tro-202ENSMUST00000087258 Arhgef18Q6P9R4 1021 aa13.17□□□□□ -0.3
Tro-202ENSMUST00000087258 Ubxn4Q8VCH8 506 aa13.17□□□□□ -0.3
Tro-202ENSMUST00000087258 Ehmt1Q5DW34 1296 aa13.16□□□□□ -0.3
Tro-202ENSMUST00000087258 Glipr1l2Q9CQ35 332 aa13.16□□□□□ -0.3
Tro-202ENSMUST00000087258 Arid3aQ62431 601 aa13.16□□□□□ -0.3
Tro-202ENSMUST00000087258 Smc2Q8CG48 1191 aaKnown RBP13.16□□□□□ -0.3
Tro-202ENSMUST00000087258 Cyp46a1Q9WVK8 500 aa13.16□□□□□ -0.3
Tro-202ENSMUST00000087258 Bicdl1A0JNT9 577 aa13.16□□□□□ -0.3
Tro-202ENSMUST00000087258 Nol8Q3UHX0 1147 aaKnown RBP13.16□□□□□ -0.3
Tro-202ENSMUST00000087258 Homer1Q9Z2Y3 366 aa13.16□□□□□ -0.3
Tro-202ENSMUST00000087258 Fkbp4P30416 458 aa13.15□□□□□ -0.3
Tro-202ENSMUST00000087258 Esx1O88933 382 aa13.15□□□□□ -0.3
Tro-202ENSMUST00000087258 Gbp4Q61107 620 aa13.15□□□□□ -0.3
Tro-202ENSMUST00000087258 Mns1Q61884 491 aa13.15□□□□□ -0.3
Tro-202ENSMUST00000087258 Odf2lQ9D478 642 aa13.15□□□□□ -0.3
Tro-202ENSMUST00000087258 Dhx8A2A4P0 1244 aaKnown RBP13.15□□□□□ -0.3
Tro-202ENSMUST00000087258 Kif3cO35066 796 aa13.15□□□□□ -0.3
Tro-202ENSMUST00000087258 Ca8P28651 291 aa13.15□□□□□ -0.3
Tro-202ENSMUST00000087258 Lrrc45Q8CIM1 670 aa13.15□□□□□ -0.3
Tro-202ENSMUST00000087258 Arhgap35Q91YM2 1499 aa13.15□□□□□ -0.3
Tro-202ENSMUST00000087258 TatQ8QZR1 454 aa13.15□□□□□ -0.3
Tro-202ENSMUST00000087258 Nek4Q9Z1J2 792 aa13.15□□□□□ -0.3
Tro-202ENSMUST00000087258 Ccdc178Q8CDV0 866 aa13.15□□□□□ -0.31
Tro-202ENSMUST00000087258 Prpf4bQ61136 1007 aaKnown RBP13.14□□□□□ -0.31
Tro-202ENSMUST00000087258 Frmd3Q8BHD4 595 aa13.14□□□□□ -0.31
Tro-202ENSMUST00000087258 Plekhh2Q8C115 1491 aa13.14□□□□□ -0.31
Tro-202ENSMUST00000087258 Erlin2Q8BFZ9 340 aa13.14□□□□□ -0.31
Tro-202ENSMUST00000087258 Mapk8ip1Q9WVI9 707 aa13.14□□□□□ -0.31
Tro-202ENSMUST00000087258 Shroom4Q1W617 1475 aa13.14□□□□□ -0.31
Tro-202ENSMUST00000087258 Abcd1P48410 736 aa13.13□□□□□ -0.31
Tro-202ENSMUST00000087258 L1td1Q587J6 782 aaKnown RBP13.13□□□□□ -0.31
Tro-202ENSMUST00000087258 Galntl5Q9D4M9 431 aa13.13□□□□□ -0.31
Tro-202ENSMUST00000087258 Pank1Q8K4K6 548 aa13.13□□□□□ -0.31
Tro-202ENSMUST00000087258 TefQ9JLC6 301 aa13.13□□□□□ -0.31
Tro-202ENSMUST00000087258 Psma5Q9Z2U1 241 aaKnown RBP13.13□□□□□ -0.31
Tro-202ENSMUST00000087258 Rnf216P58283 853 aa13.13□□□□□ -0.31
Tro-202ENSMUST00000087258 Frat2Q8K025 231 aa13.12□□□□□ -0.31
Tro-202ENSMUST00000087258 Fyco1Q8VDC1 1437 aa13.12□□□□□ -0.31
Tro-202ENSMUST00000087258 Kif3aP28741 701 aa13.12□□□□□ -0.31
Tro-202ENSMUST00000087258 Kiaa0753Q6A000 959 aa13.12□□□□□ -0.31
Tro-202ENSMUST00000087258 Dnajc2P54103 621 aaKnown RBP13.11□□□□□ -0.31
Tro-202ENSMUST00000087258 MpripP97434 1024 aa13.11□□□□□ -0.31
Tro-202ENSMUST00000087258 Cep112Q5PR68 954 aa13.11□□□□□ -0.31
Tro-202ENSMUST00000087258 Tango6Q8C3S2 1079 aa13.11□□□□□ -0.31
Tro-202ENSMUST00000087258 Pus7B7ZNL8 666 aaKnown RBP13.11□□□□□ -0.31
Tro-202ENSMUST00000087258 Larp1Q6ZQ58 1072 aaKnown RBP13.11□□□□□ -0.31
Tro-202ENSMUST00000087258 Rbm10Q99KG3 930 aaKnown RBP13.11□□□□□ -0.31
Tro-202ENSMUST00000087258 Tax1bp1Q3UKC1 814 aaKnown RBP13.11□□□□□ -0.31
Tro-202ENSMUST00000087258 Ccdc181Q80ZU5 509 aa13.11□□□□□ -0.31
Tro-202ENSMUST00000087258 Stk38Q91VJ4 465 aa13.11□□□□□ -0.31
Tro-202ENSMUST00000087258 Cwc15Q9JHS9 229 aaKnown RBP13.11□□□□□ -0.31
Tro-202ENSMUST00000087258 Mre11Q61216 706 aa13.1□□□□□ -0.31
Tro-202ENSMUST00000087258 GlmnQ8BZM1 596 aa13.1□□□□□ -0.31
Tro-202ENSMUST00000087258 KarsQ99MN1 595 aaKnown RBP13.1□□□□□ -0.31
Tro-202ENSMUST00000087258 Mipol1Q9D9F8 279 aa13.1□□□□□ -0.31
Tro-202ENSMUST00000087258 Gnl3lQ6PGG6 577 aaKnown RBP13.1□□□□□ -0.31
Tro-202ENSMUST00000087258 Nup133Q8R0G9 1155 aa13.1□□□□□ -0.31
Tro-202ENSMUST00000087258 Tmco3Q8BH01 678 aa13.09□□□□□ -0.31
Tro-202ENSMUST00000087258 Skida1Q80YR3 822 aa13.09□□□□□ -0.31
Tro-202ENSMUST00000087258 Ttc19Q8CC21 365 aa13.09□□□□□ -0.31
Tro-202ENSMUST00000087258 4933402E13RikQ9D4D2 429 aa13.09□□□□□ -0.31
Tro-202ENSMUST00000087258 Baz1bQ9Z277 1479 aa13.09□□□□□ -0.31
Tro-202ENSMUST00000087258 Rabep1O35551 862 aa13.08□□□□□ -0.31
Tro-202ENSMUST00000087258 Strn4P58404 760 aa13.08□□□□□ -0.31
Tro-202ENSMUST00000087258 Speer4bQ9D9F7 267 aa13.08□□□□□ -0.31
Tro-202ENSMUST00000087258 Stard8Q8K031 1019 aa13.08□□□□□ -0.32
Tro-202ENSMUST00000087258 Gm21698A0A087WQP8 267 aa13.08□□□□□ -0.32
Tro-202ENSMUST00000087258 Gm21671G3UY31 267 aa13.08□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 45.5 ms