RNA–Protein interactions for RNA: ENSMUST00000067005.10

Syne3-201, Transcript of Nesprin-3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syne3, Length 5,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3-201ENSMUST00000067005 Q8C5K5 320 aa17.97■□□□□ 0.47
Syne3-201ENSMUST00000067005 Eif2s2Q99L45 331 aaKnown RBP17.97■□□□□ 0.47
Syne3-201ENSMUST00000067005 Cfdp1O88271 295 aaKnown RBP17.97■□□□□ 0.47
Syne3-201ENSMUST00000067005 Becn1O88597 448 aa17.97■□□□□ 0.47
Syne3-201ENSMUST00000067005 Ccdc183A2AJB1 534 aa17.96■□□□□ 0.47
Syne3-201ENSMUST00000067005 Fchsd2Q3USJ8 740 aa17.96■□□□□ 0.47
Syne3-201ENSMUST00000067005 Afap1Q80YS6 731 aa17.96■□□□□ 0.47
Syne3-201ENSMUST00000067005 Gimap6Q8K349 305 aa17.95■□□□□ 0.46
Syne3-201ENSMUST00000067005 Sirt1Q923E4 737 aa17.95■□□□□ 0.46
Syne3-201ENSMUST00000067005 Sh3bgrQ9WUZ7 214 aa17.95■□□□□ 0.46
Syne3-201ENSMUST00000067005 Neo1P97798 1493 aa17.95■□□□□ 0.46
Syne3-201ENSMUST00000067005 Cdk19Q8BWD8 501 aa17.95■□□□□ 0.46
Syne3-201ENSMUST00000067005 IbtkQ6ZPR6 1352 aaKnown RBP17.94■□□□□ 0.46
Syne3-201ENSMUST00000067005 Cchcr1Q8K2I2 770 aa17.94■□□□□ 0.46
Syne3-201ENSMUST00000067005 Ttll13A4Q9F6 804 aa17.94■□□□□ 0.46
Syne3-201ENSMUST00000067005 PsapQ61207 557 aaKnown RBP17.93■□□□□ 0.46
Syne3-201ENSMUST00000067005 Nectin2P32507 530 aa17.93■□□□□ 0.46
Syne3-201ENSMUST00000067005 Rfx1P48377 963 aa17.93■□□□□ 0.46
Syne3-201ENSMUST00000067005 VgfQ0VGU4 617 aa17.93■□□□□ 0.46
Syne3-201ENSMUST00000067005 Cyp46a1Q9WVK8 500 aa17.93■□□□□ 0.46
Syne3-201ENSMUST00000067005 Fmnl2A2APV2 1086 aa17.93■□□□□ 0.46
Syne3-201ENSMUST00000067005 KarsQ99MN1 595 aaKnown RBP17.93■□□□□ 0.46
Syne3-201ENSMUST00000067005 Ppp2r3aB2RXC8 1150 aa17.92■□□□□ 0.46
Syne3-201ENSMUST00000067005 Gm21969J3QJZ1 289 aa17.92■□□□□ 0.46
Syne3-201ENSMUST00000067005 Zpr1Q62384 459 aa17.92■□□□□ 0.46
Syne3-201ENSMUST00000067005 Gm10471E9Q1C7 252 aa17.92■□□□□ 0.46
Syne3-201ENSMUST00000067005 Ttc21bQ0HA38 1315 aa17.91■□□□□ 0.46
Syne3-201ENSMUST00000067005 Zkscan2G3X952 960 aa17.91■□□□□ 0.46
Syne3-201ENSMUST00000067005 A0A1L1SQF0 893 aa17.91■□□□□ 0.46
Syne3-201ENSMUST00000067005 Apaf1O88879 1249 aa17.91■□□□□ 0.46
Syne3-201ENSMUST00000067005 Polr3aB2RXC6 1390 aa17.9■□□□□ 0.46
Syne3-201ENSMUST00000067005 PrxO55103 1391 aa17.9■□□□□ 0.46
Syne3-201ENSMUST00000067005 Smc3Q9CW03 1217 aaKnown RBP17.9■□□□□ 0.46
Syne3-201ENSMUST00000067005 Ush1cQ9ES64 910 aa17.89■□□□□ 0.45
Syne3-201ENSMUST00000067005 Phactr2B1AVP0 632 aa17.89■□□□□ 0.45
Syne3-201ENSMUST00000067005 Gcc1Q9D4H2 778 aa17.89■□□□□ 0.45
Syne3-201ENSMUST00000067005 Tpm3P21107 285 aaKnown RBP17.88■□□□□ 0.45
Syne3-201ENSMUST00000067005 Nek4Q9Z1J2 792 aa17.88■□□□□ 0.45
Syne3-201ENSMUST00000067005 Hmox1P14901 289 aa17.88■□□□□ 0.45
Syne3-201ENSMUST00000067005 Neurod6P48986 337 aa17.88■□□□□ 0.45
Syne3-201ENSMUST00000067005 Dusp27Q148W8 1138 aa17.88■□□□□ 0.45
Syne3-201ENSMUST00000067005 1700010I14RikQ7TPG0 532 aa17.88■□□□□ 0.45
Syne3-201ENSMUST00000067005 Hap1O35668 628 aa17.87■□□□□ 0.45
Syne3-201ENSMUST00000067005 TefQ9JLC6 301 aa17.87■□□□□ 0.45
Syne3-201ENSMUST00000067005 Kif4P33174 1231 aa17.87■□□□□ 0.45
Syne3-201ENSMUST00000067005 Washc2Q6PGL7 1334 aa17.87■□□□□ 0.45
Syne3-201ENSMUST00000067005 Kif3aP28741 701 aa17.87■□□□□ 0.45
Syne3-201ENSMUST00000067005 Trim30aP15533 496 aa17.86■□□□□ 0.45
Syne3-201ENSMUST00000067005 Mphosph10Q810V0 681 aaKnown RBP17.86■□□□□ 0.45
Syne3-201ENSMUST00000067005 Tnnt2P50752 301 aa17.86■□□□□ 0.45
Syne3-201ENSMUST00000067005 Dennd6aQ8BH65 605 aa17.86■□□□□ 0.45
Syne3-201ENSMUST00000067005 Nutm1Q8BHP2 1126 aa17.86■□□□□ 0.45
Syne3-201ENSMUST00000067005 Gripap1Q8VD04 806 aa17.86■□□□□ 0.45
Syne3-201ENSMUST00000067005 Psma5Q9Z2U1 241 aaKnown RBP17.86■□□□□ 0.45
Syne3-201ENSMUST00000067005 Gnai2P08752 355 aaKnown RBP17.86■□□□□ 0.45
Syne3-201ENSMUST00000067005 CrcpO35427 148 aa17.85■□□□□ 0.45
Syne3-201ENSMUST00000067005 Cplx1P63040 134 aa17.85■□□□□ 0.45
Syne3-201ENSMUST00000067005 MpripP97434 1024 aa17.85■□□□□ 0.45
Syne3-201ENSMUST00000067005 Ints3Q7TPD0 1041 aaKnown RBP17.85■□□□□ 0.45
Syne3-201ENSMUST00000067005 Kiaa0754Q69ZZ9 979 aa17.85■□□□□ 0.45
Syne3-201ENSMUST00000067005 Zranb3Q6NZP1 1069 aa17.85■□□□□ 0.45
Syne3-201ENSMUST00000067005 Gm1043A0A140LJC2 1431 aa17.84■□□□□ 0.45
Syne3-201ENSMUST00000067005 Tpm1P58771 284 aa17.84■□□□□ 0.45
Syne3-201ENSMUST00000067005 TkfcQ8VC30 578 aa17.83■□□□□ 0.45
Syne3-201ENSMUST00000067005 Eif3aP23116 1344 aaKnown RBP17.83■□□□□ 0.44
Syne3-201ENSMUST00000067005 Ankrd26Q811D2 1581 aa17.83■□□□□ 0.44
Syne3-201ENSMUST00000067005 UvssaQ9D479 717 aa17.83■□□□□ 0.44
Syne3-201ENSMUST00000067005 Sos1Q62245 1319 aa17.82■□□□□ 0.44
Syne3-201ENSMUST00000067005 GphnQ8BUV3 769 aaKnown RBP17.82■□□□□ 0.44
Syne3-201ENSMUST00000067005 Dhx16G3X8X0 1044 aaKnown RBP17.82■□□□□ 0.44
Syne3-201ENSMUST00000067005 Rprd2Q6NXI6 1469 aaKnown RBP17.82■□□□□ 0.44
Syne3-201ENSMUST00000067005 Tpm2P58774 284 aa17.81■□□□□ 0.44
Syne3-201ENSMUST00000067005 Map4k4P97820 1233 aaKnown RBP17.81■□□□□ 0.44
Syne3-201ENSMUST00000067005 OptnQ8K3K8 584 aa17.81■□□□□ 0.44
Syne3-201ENSMUST00000067005 Bicd2Q921C5 820 aa17.81■□□□□ 0.44
Syne3-201ENSMUST00000067005 Nphp1Q9QY53 687 aa17.81■□□□□ 0.44
Syne3-201ENSMUST00000067005 AnlnQ8K298 1121 aaKnown RBP17.8■□□□□ 0.44
Syne3-201ENSMUST00000067005 Plekhd1B2RPU2 505 aa17.8■□□□□ 0.44
Syne3-201ENSMUST00000067005 OvosQ3UU35 1456 aa17.8■□□□□ 0.44
Syne3-201ENSMUST00000067005 Cabp2Q9JLK4 216 aa17.79■□□□□ 0.44
Syne3-201ENSMUST00000067005 Fam135aQ6NS59 1506 aa17.79■□□□□ 0.44
Syne3-201ENSMUST00000067005 Hook1Q8BIL5 728 aa17.79■□□□□ 0.44
Syne3-201ENSMUST00000067005 Rec8Q8C5S7 591 aa17.79■□□□□ 0.44
Syne3-201ENSMUST00000067005 Utp3Q9JI13 469 aaKnown RBP17.79■□□□□ 0.44
Syne3-201ENSMUST00000067005 Ipo7Q9EPL8 1038 aaKnown RBP17.79■□□□□ 0.44
Syne3-201ENSMUST00000067005 Krt82Q99M74 516 aa17.78■□□□□ 0.44
Syne3-201ENSMUST00000067005 Tpm4Q6IRU2 248 aa17.78■□□□□ 0.44
Syne3-201ENSMUST00000067005 Stard3nlQ9DCI3 235 aa17.78■□□□□ 0.44
Syne3-201ENSMUST00000067005 Bcl2l13P59017 434 aa17.78■□□□□ 0.44
Syne3-201ENSMUST00000067005 Hmgn5Q9JL35 406 aa17.78■□□□□ 0.44
Syne3-201ENSMUST00000067005 Smg7Q5RJH6 1138 aaKnown RBP17.78■□□□□ 0.44
Syne3-201ENSMUST00000067005 Cdc37l1Q9CZP7 335 aa17.77■□□□□ 0.44
Syne3-201ENSMUST00000067005 Atp10dQ8K2X1 1416 aa17.77■□□□□ 0.44
Syne3-201ENSMUST00000067005 Cnnm1Q0GA42 951 aa17.77■□□□□ 0.44
Syne3-201ENSMUST00000067005 HnrnpmQ9D0E1 729 aaKnown RBP17.77■□□□□ 0.44
Syne3-201ENSMUST00000067005 Pik3c2gO70167 1506 aa17.77■□□□□ 0.44
Syne3-201ENSMUST00000067005 Ccdc173A0JLY1 547 aa17.77■□□□□ 0.44
Syne3-201ENSMUST00000067005 Ncoa1P70365 1447 aa17.77■□□□□ 0.44
Syne3-201ENSMUST00000067005 PalmQ9Z0P4 383 aa17.77■□□□□ 0.43
Syne3-201ENSMUST00000067005 Fancd2Q80V62 1450 aa17.77■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms