RNA–Protein interactions for RNA: ENSMUST00000056781.4

Ccdc57-201, Transcript of Coiled-coil domain-containing protein 57, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc57, Length 3,403 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc57-201ENSMUST00000056781 NexmifQ5DTT1 1515 aa13.48□□□□□ -0.25
Ccdc57-201ENSMUST00000056781 Atad2bE9Q166 1460 aaKnown RBP13.48□□□□□ -0.25
Ccdc57-201ENSMUST00000056781 Atxn3Q9CVD2 355 aa13.48□□□□□ -0.25
Ccdc57-201ENSMUST00000056781 Lmtk2Q3TYD6 1471 aa13.47□□□□□ -0.25
Ccdc57-201ENSMUST00000056781 Gm14025A2AP89 1413 aa13.47□□□□□ -0.25
Ccdc57-201ENSMUST00000056781 Setd1bQ8CFT2 1985 aa13.47□□□□□ -0.25
Ccdc57-201ENSMUST00000056781 Rbm25B2RY56 838 aaKnown RBP13.47□□□□□ -0.25
Ccdc57-201ENSMUST00000056781 Rbm42Q91V81 474 aaKnown RBP13.47□□□□□ -0.25
Ccdc57-201ENSMUST00000056781 Chd1lQ9CXF7 900 aa13.46□□□□□ -0.25
Ccdc57-201ENSMUST00000056781 Samd1D3YXK1 519 aa13.46□□□□□ -0.25
Ccdc57-201ENSMUST00000056781 Ifit1bl1D3Z6F0 470 aa13.46□□□□□ -0.25
Ccdc57-201ENSMUST00000056781 Aplp1Q03157 653 aa13.46□□□□□ -0.25
Ccdc57-201ENSMUST00000056781 AU019823E9PUQ3 292 aa13.46□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Sass6Q80UK7 654 aa13.46□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Olfml1Q8BSH2 233 aa13.46□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Plch2A2AP18 1501 aa13.45□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Map7d2A2AG50 781 aa13.45□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Gm9992B2RWK3 458 aa13.45□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Unc93aQ710D3 458 aa13.45□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Ccdc146E9Q9F7 977 aa13.45□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Kif4P33174 1231 aa13.45□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Ncbp1Q3UYV9 790 aaKnown RBP13.45□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Anp32cQ64G17 123 aa13.44□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Asxl1P59598 1514 aa13.44□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Wdr7Q920I9 1489 aa13.44□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Zkscan1Q8BGS3 561 aaKnown RBP13.44□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Kif7B7ZNG0 1348 aa13.43□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Map4P27546 1125 aaKnown RBP13.43□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 BbxQ8VBW5 907 aa13.43□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Usp19Q3UJD6 1360 aa13.43□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Fam184bQ0KK56 942 aa13.43□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Polr3aB2RXC6 1390 aa13.42□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Nup155Q99P88 1391 aaKnown RBP13.42□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Ppp1r3fQ9JIG4 799 aa13.42□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Q4VA45 678 aa13.42□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 SkilQ60665 675 aa13.42□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Mkrn3Q60764 544 aa13.42□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Os9Q8K2C7 672 aa13.42□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Nek4Q9Z1J2 792 aa13.42□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Npm1Q61937 292 aaKnown RBP13.42□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 SphkapQ6NSW3 1687 aa13.41□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Map3k4O08648 1597 aa13.41□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Pds5bQ4VA53 1446 aaKnown RBP13.41□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Gm45140A0A0N4SUM8 220 aa13.41□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Prdm4Q80V63 803 aa13.41□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Kdm4aQ8BW72 1064 aa13.41□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Adam1bQ8R534 806 aa13.41□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Ccdc173A0JLY1 547 aa13.41□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Zmynd15Q8C0R7 736 aa13.41□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Clasp1Q80TV8 1535 aaKnown RBP13.4□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Atf7ipQ7TT18 1306 aa13.4□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Casc1Q6TDU8 730 aa13.4□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Safb2Q80YR5 991 aaKnown RBP13.4□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Atp2b2Q9R0K7 1198 aa13.4□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Gm973E9Q295 1059 aa13.4□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Glipr1l2Q9CQ35 332 aa13.4□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Cpsf1Q9EPU4 1441 aaKnown RBP13.4□□□□□ -0.26
Ccdc57-201ENSMUST00000056781 Dync1i1O88485 628 aa13.39□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Gadd45bP22339 160 aa13.39□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Kdm4cQ8VCD7 1054 aa13.39□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Igf1rQ60751 1373 aa13.39□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Hvcn1Q3U2S8 269 aa13.39□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Nxf2Q4ZGD8 691 aa13.39□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Irx4Q9QY61 515 aa13.39□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Kdm5cP41230 1554 aa13.39□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Anapc15-psA0A140T8L6 141 aa13.39□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Bach2P97303 839 aa13.39□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 KdrP35918 1367 aa13.38□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 1700010I14RikQ7TPG0 532 aa13.38□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Uspl1Q3ULM6 1089 aa13.38□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Tbc1d9Q3UYK3 1264 aa13.38□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Unc13aQ4KUS2 1712 aa13.38□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Fam135bQ9DAI6 1403 aa13.37□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Pcmtd1P59913 357 aa13.37□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Lamc3Q9R0B6 1581 aa13.37□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 BC005561E9Q5E2 1589 aa13.37□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Kdm2aP59997 1161 aa13.37□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Ccar1Q8CH18 1146 aaKnown RBP13.37□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Arid4aF8VPQ2 1261 aaKnown RBP13.36□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Nutm1Q8BHP2 1126 aa13.36□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Ncapd2Q8K2Z4 1392 aa13.36□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Tpd52l1O54818 204 aa13.36□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Taf3Q5HZG4 932 aa13.36□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Tbc1d31Q6NXY1 996 aa13.36□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 PtmsQ9D0J8 101 aaKnown RBP13.36□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Phldb1Q6PDH0 1371 aaKnown RBP13.36□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Adgrb2Q8CGM1 1561 aa13.35□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 AlkP97793 1621 aa13.35□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Adcy5P84309 1262 aa13.35□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Inpp5bQ8K337 993 aa13.35□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Frmd3Q8BHD4 595 aa13.35□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Srcin1Q9QWI6 1250 aa13.35□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Plin1Q8CGN5 517 aa13.34□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Brd1E9PZ26 1189 aaKnown RBP13.34□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Fez2Q6TYB5 348 aa13.34□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Gdpd2Q9ESM6 539 aa13.34□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Lamc1P02468 1607 aaKnown RBP13.34□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Nfatc2ipO09130 412 aa13.33□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 Irx2P81066 474 aa13.33□□□□□ -0.27
Ccdc57-201ENSMUST00000056781 IqubQ8CDK3 788 aa13.33□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms