RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 GsdmaQ9EST1 446 aa12.58□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 Trim58Q5NCC9 485 aa12.58□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 Lemd3Q9WU40 921 aa12.58□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 P2rx7Q9Z1M0 595 aa12.58□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 Ksr2Q3UVC0 959 aa12.58□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 Stard8Q8K031 1019 aa12.57□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 Cluap1Q8R3P7 413 aa12.57□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 AatkQ80YE4 1365 aa12.56□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 U2af1Q9D883 239 aaKnown RBP12.56□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 Abca17E9PX95 1733 aa12.56□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 Nphp4P59240 1425 aa12.55□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 Ppp1r9bQ6R891 817 aaKnown RBP12.55□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 Zmym3Q9JLM4 1370 aa12.55□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 Myo5cE9Q1F5 1742 aa12.54□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 Chd1P40201 1711 aa12.54□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 Abca6Q8K441 1624 aa12.54□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 Pnmal2G3X9N3 661 aa12.54□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 Kiaa1210E9Q0C6 1637 aa12.54□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 Spryd3E9Q9B3 442 aa12.53□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 Ppp1r3fQ9JIG4 799 aa12.53□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 Map4k4P97820 1233 aaKnown RBP12.53□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 Zranb1Q7M760 708 aa12.53□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 Tsen2Q6P7W5 460 aa12.53□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 Cep152A2AUM9 1736 aaKnown RBP12.53□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 IbtkQ6ZPR6 1352 aaKnown RBP12.52□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 Znf521Q6KAS7 1311 aa12.52□□□□□ -0.4
Ccdc40-202ENSMUST00000053440 Myom1Q62234 1667 aaKnown RBP12.52□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Cald1E9QA15 768 aaKnown RBP12.52□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Stk26Q99JT2 416 aa12.51□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Gprasp1Q5U4C1 1347 aa12.51□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Znf330Q922H9 316 aa12.51□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Nos1Q9Z0J4 1429 aa12.51□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Iqgap3F8VQ29 1632 aa12.5□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Ppp2r3aB2RXC8 1150 aa12.5□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Tnpo1Q8BFY9 898 aaKnown RBP12.5□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Atp1b4Q99ME6 356 aa12.5□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Rims1Q99NE5 1463 aa12.5□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Scaf11E9PZM7 1456 aaKnown RBP12.5□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Cdk5rap2Q8K389 1822 aa12.5□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Exosc9Q9JHI7 438 aaKnown RBP12.49□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 IqubQ8CDK3 788 aa12.49□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Talpid3E9PV87 1520 aa12.49□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Myom2Q14BI5 1463 aa12.48□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Fndc1E9Q043 1732 aa12.48□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Mfap1aC0HKD8 439 aaKnown RBP12.48□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Mfap1bC0HKD9 439 aaKnown RBP12.48□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Zfyve16Q80U44 1528 aa12.47□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 AU022751B1B0V2 589 aa12.47□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Sptbn5F6UCX4 1208 aa12.47□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Dusp27Q148W8 1138 aa12.47□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Ccar1Q8CH18 1146 aaKnown RBP12.47□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Znf518aB2RRF6 1478 aaKnown RBP12.47□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Tmc1Q8R4P5 757 aa12.46□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Igf1rQ60751 1373 aa12.46□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Ythdc2B2RR83 1445 aaKnown RBP12.46□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Htatsf1Q8BGC0 757 aa12.46□□□□□ -0.41
Ccdc40-202ENSMUST00000053440 Senp3Q9EP97 568 aaKnown RBP12.46□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 Efcab6Q6P1E8 1516 aa12.46□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 Abca8aQ8K442 1620 aa12.46□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 Fam135bQ9DAI6 1403 aa12.45□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 Iqsec2Q5DU25 1478 aa12.45□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 Pdlim2Q8R1G6 349 aa12.45□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 Prex1Q69ZK0 1650 aa12.44□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 Tmem131lQ3U3D7 1597 aa12.44□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 Nutm1Q8BHP2 1126 aa12.44□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 Abca9Q8K449 1623 aa12.44□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 CenpjQ569L8 1344 aa12.44□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 Adgrb3Q80ZF8 1522 aa12.44□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 AU019823E9PUQ3 292 aa12.44□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 Rabep1O35551 862 aa12.43□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 Ccdc60Q8C4J0 545 aa12.43□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 Lrrc7Q80TE7 1490 aa12.43□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 PalldQ9ET54 1408 aa12.42□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 Uggt1Q6P5E4 1551 aa12.42□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 InsrP15208 1372 aa12.42□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 Tbc1d32Q3URV1 1296 aa12.41□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 DnmbpQ6TXD4 1580 aa12.41□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 Maco1Q7TQE6 664 aaKnown RBP12.41□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 Ehbp1l1Q99MS7 1716 aa12.4□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 Nectin2P32507 530 aa12.4□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 Atl3Q91YH5 541 aa12.4□□□□□ -0.42
Ccdc40-202ENSMUST00000053440 Ipo4Q8VI75 1082 aa12.4□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Skint5A7XUY5 1461 aa12.39□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Aplp1Q03157 653 aa12.39□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Tmco5bQ80X59 307 aa12.39□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Ptch1Q61115 1434 aa12.39□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Cfap65Q3V0B4 1847 aa12.39□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 PtprtQ99M80 1454 aa12.39□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Gli2Q0VGT2 1544 aa12.39□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 KdrP35918 1367 aa12.39□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Rbm25B2RY56 838 aaKnown RBP12.38□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Shq1Q7TMX5 569 aa12.38□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Catsper2A2ARP9 588 aa12.38□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 CastP51125 788 aa12.38□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Dnttip2Q8R2M2 758 aaKnown RBP12.38□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Phlpp2Q8BXA7 1320 aa12.38□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 OvosQ3UU35 1456 aa12.38□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Sipa1l1Q8C0T5 1782 aa12.37□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Cog6Q8R3I3 657 aa12.37□□□□□ -0.43
Ccdc40-202ENSMUST00000053440 Kif18aQ91WD7 886 aa12.37□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms