RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Sall3Q62255 1320 aa22.44■■□□□ 1.18
Scaf11-201ENSMUST00000047835 Zfp444Q3TDV8 331 aaKnown RBP22.43■■□□□ 1.18
Scaf11-201ENSMUST00000047835 TefQ9JLC6 301 aa22.43■■□□□ 1.18
Scaf11-201ENSMUST00000047835 Sytl4Q9R0Q1 673 aa22.43■■□□□ 1.18
Scaf11-201ENSMUST00000047835 Plekhh1Q80TI1 1356 aa22.43■■□□□ 1.18
Scaf11-201ENSMUST00000047835 Lamc3Q9R0B6 1581 aa22.42■■□□□ 1.18
Scaf11-201ENSMUST00000047835 CrcpO35427 148 aa22.42■■□□□ 1.18
Scaf11-201ENSMUST00000047835 AU015836B2RUM3 263 aa22.42■■□□□ 1.18
Scaf11-201ENSMUST00000047835 KarsQ99MN1 595 aaKnown RBP22.42■■□□□ 1.18
Scaf11-201ENSMUST00000047835 Casq1O09165 405 aa22.41■■□□□ 1.18
Scaf11-201ENSMUST00000047835 Isy1Q69ZQ2 285 aaKnown RBP22.41■■□□□ 1.18
Scaf11-201ENSMUST00000047835 BccipQ9CWI3 316 aa22.41■■□□□ 1.18
Scaf11-201ENSMUST00000047835 Stk3Q9JI10 497 aa22.41■■□□□ 1.18
Scaf11-201ENSMUST00000047835 Ttc21bQ0HA38 1315 aa22.41■■□□□ 1.18
Scaf11-201ENSMUST00000047835 Sf3a1Q8K4Z5 791 aaKnown RBP22.4■■□□□ 1.18
Scaf11-201ENSMUST00000047835 Gm21969J3QJZ1 289 aa22.4■■□□□ 1.18
Scaf11-201ENSMUST00000047835 FosbP13346 338 aa22.4■■□□□ 1.18
Scaf11-201ENSMUST00000047835 Nap1l3Q794H2 544 aa22.4■■□□□ 1.18
Scaf11-201ENSMUST00000047835 GphnQ8BUV3 769 aaKnown RBP22.39■■□□□ 1.18
Scaf11-201ENSMUST00000047835 Gimap6Q8K349 305 aa22.39■■□□□ 1.18
Scaf11-201ENSMUST00000047835 Erc2Q6PH08 957 aa22.39■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Speer4bQ9D9F7 267 aa22.39■■□□□ 1.17
Scaf11-201ENSMUST00000047835 AqrQ8CFQ3 1481 aaKnown RBP22.39■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Cyp46a1Q9WVK8 500 aa22.39■■□□□ 1.17
Scaf11-201ENSMUST00000047835 PalmQ9Z0P4 383 aa22.38■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Abcc5Q9R1X5 1436 aa22.38■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Cyb5rlB1AS42 316 aa22.38■■□□□ 1.17
Scaf11-201ENSMUST00000047835 KinQ8K339 391 aa22.38■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Ccdc171E9Q1U1 1324 aa22.38■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Ccp110Q7TSH4 1004 aa22.37■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Gnl3lQ6PGG6 577 aaKnown RBP22.37■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Nek4Q9Z1J2 792 aa22.37■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Naip2Q9QUK4 1447 aa22.37■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Krt82Q99M74 516 aa22.37■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Rnf20Q5DTM8 973 aa22.36■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Rbm5Q91YE7 815 aaKnown RBP22.36■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Dusp27Q148W8 1138 aa22.36■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Cplx2P84086 134 aa22.35■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Kri1Q8VDQ9 704 aaKnown RBP22.35■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Ggnbp2Q5SV77 696 aa22.35■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Noc3lQ8VI84 807 aaKnown RBP22.35■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Gpatch11Q3UFS4 262 aa22.35■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Gm21680A0A0G2JGR8 267 aa22.34■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Gm21663A0A0G2JE01 267 aa22.34■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Gm7361D3Z6R1 267 aa22.34■■□□□ 1.17
Scaf11-201ENSMUST00000047835 5031410I06RikE9Q4E0 267 aa22.34■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Gm1979E9QAN3 267 aa22.34■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Gm5862K7N5V5 267 aa22.34■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Gm10220K7N660 267 aa22.34■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Atl3Q91YH5 541 aa22.34■■□□□ 1.17
Scaf11-201ENSMUST00000047835 AampJ3QN89 436 aa22.33■■□□□ 1.17
Scaf11-201ENSMUST00000047835 PhaxQ9JJT9 385 aaKnown RBP22.33■■□□□ 1.17
Scaf11-201ENSMUST00000047835 Slc52a2Q9D8F3 450 aa22.32■■□□□ 1.16
Scaf11-201ENSMUST00000047835 Znf710Q3U288 666 aa22.32■■□□□ 1.16
Scaf11-201ENSMUST00000047835 Prkrip1Q9CWV6 186 aaKnown RBP22.32■■□□□ 1.16
Scaf11-201ENSMUST00000047835 Plekhg5Q66T02 1073 aa22.31■■□□□ 1.16
Scaf11-201ENSMUST00000047835 Polr3gQ6NXY9 223 aa22.3■■□□□ 1.16
Scaf11-201ENSMUST00000047835 RdxP26043 583 aaKnown RBP22.3■■□□□ 1.16
Scaf11-201ENSMUST00000047835 Cetn4Q8K4K1 168 aa22.3■■□□□ 1.16
Scaf11-201ENSMUST00000047835 PrxO55103 1391 aa22.29■■□□□ 1.16
Scaf11-201ENSMUST00000047835 Cplx1P63040 134 aa22.29■■□□□ 1.16
Scaf11-201ENSMUST00000047835 Sh3bgrQ9WUZ7 214 aa22.29■■□□□ 1.16
Scaf11-201ENSMUST00000047835 Rabep1O35551 862 aa22.29■■□□□ 1.16
Scaf11-201ENSMUST00000047835 TkfcQ8VC30 578 aa22.29■■□□□ 1.16
Scaf11-201ENSMUST00000047835 Klf15Q9EPW2 415 aa22.28■■□□□ 1.16
Scaf11-201ENSMUST00000047835 Abl1P00520 1123 aa22.28■■□□□ 1.16
Scaf11-201ENSMUST00000047835 MsnP26041 577 aaKnown RBP22.28■■□□□ 1.16
Scaf11-201ENSMUST00000047835 Q3UJC8 639 aa22.28■■□□□ 1.16
Scaf11-201ENSMUST00000047835 Srek1Q8BZX4 494 aaKnown RBP22.28■■□□□ 1.16
Scaf11-201ENSMUST00000047835 Smc3Q9CW03 1217 aaKnown RBP22.28■■□□□ 1.16
Scaf11-201ENSMUST00000047835 Sugp2Q8CH09 1067 aa22.28■■□□□ 1.16
Scaf11-201ENSMUST00000047835 Atp10dQ8K2X1 1416 aa22.27■■□□□ 1.16
Scaf11-201ENSMUST00000047835 Plekhd1B2RPU2 505 aa22.27■■□□□ 1.16
Scaf11-201ENSMUST00000047835 Cdc37l1Q9CZP7 335 aa22.27■■□□□ 1.16
Scaf11-201ENSMUST00000047835 SkilQ60665 675 aa22.27■■□□□ 1.16
Scaf11-201ENSMUST00000047835 Stk11ipQ3TAA7 1072 aa22.27■■□□□ 1.15
Scaf11-201ENSMUST00000047835 Evc2Q8K1G2 1220 aa22.27■■□□□ 1.15
Scaf11-201ENSMUST00000047835 Gprasp1Q5U4C1 1347 aa22.26■■□□□ 1.15
Scaf11-201ENSMUST00000047835 Gnai2P08752 355 aaKnown RBP22.26■■□□□ 1.15
Scaf11-201ENSMUST00000047835 Nol12Q8BG17 217 aa22.25■■□□□ 1.15
Scaf11-201ENSMUST00000047835 Mre11Q61216 706 aa22.25■■□□□ 1.15
Scaf11-201ENSMUST00000047835 OvosQ3UU35 1456 aa22.25■■□□□ 1.15
Scaf11-201ENSMUST00000047835 PsapQ61207 557 aaKnown RBP22.25■■□□□ 1.15
Scaf11-201ENSMUST00000047835 Ccdc183A2AJB1 534 aa22.25■■□□□ 1.15
Scaf11-201ENSMUST00000047835 Fam50bQ9WTJ8 334 aa22.25■■□□□ 1.15
Scaf11-201ENSMUST00000047835 Ttll13A4Q9F6 804 aa22.24■■□□□ 1.15
Scaf11-201ENSMUST00000047835 Bicd2Q921C5 820 aa22.24■■□□□ 1.15
Scaf11-201ENSMUST00000047835 Exoc6bA6H5Z3 810 aa22.24■■□□□ 1.15
Scaf11-201ENSMUST00000047835 Map3k13Q1HKZ5 959 aa22.23■■□□□ 1.15
Scaf11-201ENSMUST00000047835 Stard3nlQ9DCI3 235 aa22.23■■□□□ 1.15
Scaf11-201ENSMUST00000047835 Gm10563F6WIE4 79 aa22.23■■□□□ 1.15
Scaf11-201ENSMUST00000047835 IbtkQ6ZPR6 1352 aaKnown RBP22.23■■□□□ 1.15
Scaf11-201ENSMUST00000047835 Mad1l1Q9WTX8 717 aaKnown RBP22.22■■□□□ 1.15
Scaf11-201ENSMUST00000047835 Washc2Q6PGL7 1334 aa22.22■■□□□ 1.15
Scaf11-201ENSMUST00000047835 GnpatP98192 678 aa22.22■■□□□ 1.15
Scaf11-201ENSMUST00000047835 Btbd11Q6GQW0 1109 aa22.22■■□□□ 1.15
Scaf11-201ENSMUST00000047835 Caskin1Q6P9K8 1431 aa22.22■■□□□ 1.15
Scaf11-201ENSMUST00000047835 Utp3Q9JI13 469 aaKnown RBP22.21■■□□□ 1.15
Scaf11-201ENSMUST00000047835 Nphp1Q9QY53 687 aa22.21■■□□□ 1.15
Scaf11-201ENSMUST00000047835 PogkQ80TC5 607 aa22.21■■□□□ 1.15
Retrieved 100 of 22,080 RNA–protein pairs in 43.8 ms