RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Tmc1Q8R4P5 757 aa19.39■□□□□ 0.69
Nup54-201ENSMUST00000038514 Znf518aB2RRF6 1478 aaKnown RBP19.38■□□□□ 0.69
Nup54-201ENSMUST00000038514 Prex1Q69ZK0 1650 aa19.38■□□□□ 0.69
Nup54-201ENSMUST00000038514 Fan1Q69ZT1 1020 aa19.37■□□□□ 0.69
Nup54-201ENSMUST00000038514 Ipo8Q7TMY7 1010 aa19.37■□□□□ 0.69
Nup54-201ENSMUST00000038514 Ak7Q9D2H2 614 aa19.37■□□□□ 0.69
Nup54-201ENSMUST00000038514 Uggt1Q6P5E4 1551 aa19.37■□□□□ 0.69
Nup54-201ENSMUST00000038514 Efcab6Q6P1E8 1516 aa19.37■□□□□ 0.69
Nup54-201ENSMUST00000038514 Srpk2O54781 681 aaKnown RBP19.37■□□□□ 0.69
Nup54-201ENSMUST00000038514 KdrP35918 1367 aa19.36■□□□□ 0.69
Nup54-201ENSMUST00000038514 AatkQ80YE4 1365 aa19.36■□□□□ 0.69
Nup54-201ENSMUST00000038514 Pdlim2Q8R1G6 349 aa19.36■□□□□ 0.69
Nup54-201ENSMUST00000038514 Map4k4P97820 1233 aaKnown RBP19.35■□□□□ 0.69
Nup54-201ENSMUST00000038514 Pank1Q8K4K6 548 aa19.35■□□□□ 0.69
Nup54-201ENSMUST00000038514 Stk24Q99KH8 431 aa19.35■□□□□ 0.69
Nup54-201ENSMUST00000038514 Eif2s2Q99L45 331 aaKnown RBP19.35■□□□□ 0.69
Nup54-201ENSMUST00000038514 Trim30dE9PWL0 497 aa19.34■□□□□ 0.69
Nup54-201ENSMUST00000038514 Ccdc183A2AJB1 534 aa19.34■□□□□ 0.69
Nup54-201ENSMUST00000038514 Topbp1Q6ZQF0 1515 aa19.33■□□□□ 0.68
Nup54-201ENSMUST00000038514 IbtkQ6ZPR6 1352 aaKnown RBP19.32■□□□□ 0.68
Nup54-201ENSMUST00000038514 Trim58Q5NCC9 485 aa19.32■□□□□ 0.68
Nup54-201ENSMUST00000038514 Fam135bQ9DAI6 1403 aa19.31■□□□□ 0.68
Nup54-201ENSMUST00000038514 Scaf11E9PZM7 1456 aaKnown RBP19.31■□□□□ 0.68
Nup54-201ENSMUST00000038514 Hsp90ab1P11499 724 aaKnown RBP19.31■□□□□ 0.68
Nup54-201ENSMUST00000038514 Ppp1r9bQ6R891 817 aaKnown RBP19.31■□□□□ 0.68
Nup54-201ENSMUST00000038514 Rlbp1Q9Z275 317 aa19.31■□□□□ 0.68
Nup54-201ENSMUST00000038514 Duxf3A0A0N4SV92 674 aa19.3■□□□□ 0.68
Nup54-201ENSMUST00000038514 Igf1rQ60751 1373 aa19.3■□□□□ 0.68
Nup54-201ENSMUST00000038514 Ino80Q6ZPV2 1559 aa19.3■□□□□ 0.68
Nup54-201ENSMUST00000038514 Ift172Q6VH22 1749 aa19.3■□□□□ 0.68
Nup54-201ENSMUST00000038514 4930567H17RikQ3V0K5 233 aa19.3■□□□□ 0.68
Nup54-201ENSMUST00000038514 P2rx7Q9Z1M0 595 aa19.29■□□□□ 0.68
Nup54-201ENSMUST00000038514 MaddQ80U28 1577 aa19.29■□□□□ 0.68
Nup54-201ENSMUST00000038514 Adgrl3Q80TS3 1537 aa19.28■□□□□ 0.68
Nup54-201ENSMUST00000038514 AampJ3QN89 436 aa19.28■□□□□ 0.68
Nup54-201ENSMUST00000038514 Puf60Q3UEB3 564 aaKnown RBP19.28■□□□□ 0.68
Nup54-201ENSMUST00000038514 Adgrl1Q80TR1 1466 aa19.28■□□□□ 0.68
Nup54-201ENSMUST00000038514 Cnga1P29974 684 aa19.27■□□□□ 0.68
Nup54-201ENSMUST00000038514 Hfm1D3Z4R1 1434 aa19.27■□□□□ 0.68
Nup54-201ENSMUST00000038514 Eif2ak4Q9QZ05 1648 aa19.27■□□□□ 0.68
Nup54-201ENSMUST00000038514 Atxn3Q9CVD2 355 aa19.27■□□□□ 0.67
Nup54-201ENSMUST00000038514 Ttc37F8VPK0 1563 aa19.26■□□□□ 0.67
Nup54-201ENSMUST00000038514 Depdc5P61460 1591 aa19.26■□□□□ 0.67
Nup54-201ENSMUST00000038514 Prdm10Q3UTQ7 1184 aa19.26■□□□□ 0.67
Nup54-201ENSMUST00000038514 Akap12Q9WTQ5 1684 aa19.26■□□□□ 0.67
Nup54-201ENSMUST00000038514 GsdmaQ9EST1 446 aa19.25■□□□□ 0.67
Nup54-201ENSMUST00000038514 Plcd4Q8K3R3 807 aa19.25■□□□□ 0.67
Nup54-201ENSMUST00000038514 Skint5A7XUY5 1461 aa19.24■□□□□ 0.67
Nup54-201ENSMUST00000038514 Plxnc1Q9QZC2 1574 aa19.23■□□□□ 0.67
Nup54-201ENSMUST00000038514 InsrP15208 1372 aa19.23■□□□□ 0.67
Nup54-201ENSMUST00000038514 Tecpr2Q3UH45 1423 aa19.23■□□□□ 0.67
Nup54-201ENSMUST00000038514 PalldQ9ET54 1408 aa19.23■□□□□ 0.67
Nup54-201ENSMUST00000038514 Hecw2Q6I6G8 1578 aa19.22■□□□□ 0.67
Nup54-201ENSMUST00000038514 Lemd3Q9WU40 921 aa19.22■□□□□ 0.67
Nup54-201ENSMUST00000038514 Lrrc7Q80TE7 1490 aa19.21■□□□□ 0.67
Nup54-201ENSMUST00000038514 Ppp2r3aB2RXC8 1150 aa19.2■□□□□ 0.66
Nup54-201ENSMUST00000038514 Cald1E9QA15 768 aaKnown RBP19.2■□□□□ 0.66
Nup54-201ENSMUST00000038514 Kiaa0556Q8C753 1610 aa19.19■□□□□ 0.66
Nup54-201ENSMUST00000038514 Med14A2ABV5 1459 aaKnown RBP19.19■□□□□ 0.66
Nup54-201ENSMUST00000038514 Cfap65Q3V0B4 1847 aa19.17■□□□□ 0.66
Nup54-201ENSMUST00000038514 Armcx1Q9CX83 456 aa19.17■□□□□ 0.66
Nup54-201ENSMUST00000038514 AU022751B1B0V2 589 aa19.16■□□□□ 0.66
Nup54-201ENSMUST00000038514 Sptbn5F6UCX4 1208 aa19.16■□□□□ 0.66
Nup54-201ENSMUST00000038514 Nrxn1Q9CS84 1514 aa19.16■□□□□ 0.66
Nup54-201ENSMUST00000038514 Stag3O70576 1240 aa19.15■□□□□ 0.66
Nup54-201ENSMUST00000038514 Ncbp3Q8BZR9 615 aaKnown RBP19.15■□□□□ 0.66
Nup54-201ENSMUST00000038514 KarsQ99MN1 595 aaKnown RBP19.15■□□□□ 0.66
Nup54-201ENSMUST00000038514 Gli2Q0VGT2 1544 aa19.15■□□□□ 0.66
Nup54-201ENSMUST00000038514 Ythdc2B2RR83 1445 aaKnown RBP19.15■□□□□ 0.66
Nup54-201ENSMUST00000038514 Gm6268A2A3U9 297 aa19.14■□□□□ 0.66
Nup54-201ENSMUST00000038514 Polr3glQ8R0C0 218 aa19.14■□□□□ 0.66
Nup54-201ENSMUST00000038514 Cdc42bpgQ80UW5 1551 aa19.14■□□□□ 0.66
Nup54-201ENSMUST00000038514 Ksr2Q3UVC0 959 aa19.14■□□□□ 0.65
Nup54-201ENSMUST00000038514 Htatsf1Q8BGC0 757 aa19.14■□□□□ 0.65
Nup54-201ENSMUST00000038514 Apaf1O88879 1249 aa19.13■□□□□ 0.65
Nup54-201ENSMUST00000038514 Tbc1d32Q3URV1 1296 aa19.13■□□□□ 0.65
Nup54-201ENSMUST00000038514 Ccar1Q8CH18 1146 aaKnown RBP19.12■□□□□ 0.65
Nup54-201ENSMUST00000038514 Mroh1E0CZ22 1640 aa19.12■□□□□ 0.65
Nup54-201ENSMUST00000038514 OvosQ3UU35 1456 aa19.11■□□□□ 0.65
Nup54-201ENSMUST00000038514 PtprtQ99M80 1454 aa19.11■□□□□ 0.65
Nup54-201ENSMUST00000038514 Atl3Q91YH5 541 aa19.11■□□□□ 0.65
Nup54-201ENSMUST00000038514 Ipo4Q8VI75 1082 aa19.11■□□□□ 0.65
Nup54-201ENSMUST00000038514 Rabep1O35551 862 aa19.1■□□□□ 0.65
Nup54-201ENSMUST00000038514 Pnmal2G3X9N3 661 aa19.1■□□□□ 0.65
Nup54-201ENSMUST00000038514 ArxO35085 564 aa19.1■□□□□ 0.65
Nup54-201ENSMUST00000038514 U2af1Q9D883 239 aaKnown RBP19.1■□□□□ 0.65
Nup54-201ENSMUST00000038514 Atp10aO54827 1508 aa19.09■□□□□ 0.65
Nup54-201ENSMUST00000038514 CenpjQ569L8 1344 aa19.09■□□□□ 0.65
Nup54-201ENSMUST00000038514 Tsen2Q6P7W5 460 aa19.09■□□□□ 0.65
Nup54-201ENSMUST00000038514 Tnpo1Q8BFY9 898 aaKnown RBP19.09■□□□□ 0.65
Nup54-201ENSMUST00000038514 Trim26Q99PN3 545 aa19.08■□□□□ 0.65
Nup54-201ENSMUST00000038514 Phlpp2Q8BXA7 1320 aa19.08■□□□□ 0.65
Nup54-201ENSMUST00000038514 Ppp1r3fQ9JIG4 799 aa19.07■□□□□ 0.64
Nup54-201ENSMUST00000038514 Arid3cA6PWV5 409 aa19.07■□□□□ 0.64
Nup54-201ENSMUST00000038514 IqubQ8CDK3 788 aa19.07■□□□□ 0.64
Nup54-201ENSMUST00000038514 AdgbG3UZ78 1657 aa19.07■□□□□ 0.64
Nup54-201ENSMUST00000038514 Fgd1P52734 960 aa19.05■□□□□ 0.64
Nup54-201ENSMUST00000038514 Dusp27Q148W8 1138 aa19.05■□□□□ 0.64
Nup54-201ENSMUST00000038514 Slc52a2Q9D8F3 450 aa19.05■□□□□ 0.64
Nup54-201ENSMUST00000038514 AglF8VPN4 1532 aa19.04■□□□□ 0.64
Retrieved 100 of 22,080 RNA–protein pairs in 51.8 ms