RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Pank1Q8K4K6 548 aa20.25■□□□□ 0.83
Col17a1-201ENSMUST00000026045 Ccer1Q9CQL2 403 aa20.24■□□□□ 0.83
Col17a1-201ENSMUST00000026045 NaspQ99MD9 773 aaKnown RBP20.24■□□□□ 0.83
Col17a1-201ENSMUST00000026045 Ppp2r1aQ76MZ3 589 aa20.23■□□□□ 0.83
Col17a1-201ENSMUST00000026045 Naip2Q9QUK4 1447 aa20.23■□□□□ 0.83
Col17a1-201ENSMUST00000026045 Cabp4Q8VHC5 271 aa20.23■□□□□ 0.83
Col17a1-201ENSMUST00000026045 Eif4g2Q62448 906 aaKnown RBP20.23■□□□□ 0.83
Col17a1-201ENSMUST00000026045 MecomP14404 1042 aa20.22■□□□□ 0.83
Col17a1-201ENSMUST00000026045 Kcnj4P52189 445 aa20.22■□□□□ 0.83
Col17a1-201ENSMUST00000026045 PogkQ80TC5 607 aa20.22■□□□□ 0.83
Col17a1-201ENSMUST00000026045 Brpf1B2RRD7 1212 aa20.21■□□□□ 0.83
Col17a1-201ENSMUST00000026045 Ap3b2Q9JME5 1082 aa20.21■□□□□ 0.83
Col17a1-201ENSMUST00000026045 Anapc15-psA0A140T8L6 141 aa20.21■□□□□ 0.83
Col17a1-201ENSMUST00000026045 Wdr62Q3U3T8 1523 aa20.2■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Il16O54824 1322 aa20.2■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Plekhg5Q66T02 1073 aa20.19■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Pabpn1Q8CCS6 302 aaKnown RBP20.19■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Tex2Q6ZPJ0 1128 aaKnown RBP20.19■□□□□ 0.82
Col17a1-201ENSMUST00000026045 CastP51125 788 aa20.19■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Cc2d1aQ8K1A6 943 aa20.19■□□□□ 0.82
Col17a1-201ENSMUST00000026045 AqrQ8CFQ3 1481 aaKnown RBP20.18■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Mical1Q8VDP3 1048 aa20.18■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Plekhh1Q80TI1 1356 aa20.17■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Ccdc141E9Q8Q6 1531 aa20.17■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Mrc2Q64449 1479 aa20.17■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Atl3Q91YH5 541 aa20.17■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Rufy1Q8BIJ7 712 aa20.17■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Olfml1Q8BSH2 233 aa20.17■□□□□ 0.82
Col17a1-201ENSMUST00000026045 NexmifQ5DTT1 1515 aa20.16■□□□□ 0.82
Col17a1-201ENSMUST00000026045 A2mQ6GQT1 1474 aa20.16■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Gsto1O09131 240 aa20.16■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Kcnh8P59111 1102 aa20.16■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Fam163aQ8CAA5 168 aa20.16■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Plb1Q3TTY0 1478 aa20.16■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Slc4a10Q5DTL9 1118 aa20.15■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Rab3gap2Q8BMG7 1366 aa20.15■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Mcm4P49717 862 aa20.15■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Sptbn5F6UCX4 1208 aa20.14■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Lamc3Q9R0B6 1581 aa20.14■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Nop14Q8R3N1 860 aaKnown RBP20.14■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Chaf1aQ9QWF0 911 aa20.14■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Mex3cQ05A36 652 aaKnown RBP20.14■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Tpm1P58771 284 aa20.14■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Bicd2Q921C5 820 aa20.14■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Nectin2P32507 530 aa20.13■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Arglu1Q3UL36 271 aaKnown RBP20.13■□□□□ 0.81
Col17a1-201ENSMUST00000026045 MlecQ6ZQI3 291 aaKnown RBP20.13■□□□□ 0.81
Col17a1-201ENSMUST00000026045 KinQ8K339 391 aa20.13■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Triml2E9PW10 424 aa20.13■□□□□ 0.81
Col17a1-201ENSMUST00000026045 TchhA0A0B4J1F9 1599 aa20.12■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Ppp2r3aB2RXC8 1150 aa20.12■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Fez2Q6TYB5 348 aa20.12■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Nutm1Q8BHP2 1126 aa20.12■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Q9D9H8 365 aa20.12■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Pdcl2Q78Y63 240 aa20.12■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Usp16Q99LG0 825 aa20.11■□□□□ 0.81
Col17a1-201ENSMUST00000026045 SynmQ70IV5 1561 aa20.11■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Nol10Q5RJG1 687 aaKnown RBP20.11■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Rbm25B2RY56 838 aaKnown RBP20.11■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Ccdc83Q9D4V3 305 aa20.11■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Mug1P28665 1476 aa20.11■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Frmd3Q8BHD4 595 aa20.1■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Atp2b2Q9R0K7 1198 aa20.1■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Gabpb2P81069 414 aa20.09■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Rsph6aQ8CDR2 708 aa20.09■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Fgd6Q69ZL1 1399 aa20.09■□□□□ 0.81
Col17a1-201ENSMUST00000026045 A0A0U1RNP2 1173 aa20.09■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Chmp3Q9CQ10 224 aa20.09■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Sparcl1P70663 650 aa20.08■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Tmco3Q8BH01 678 aa20.08■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Abcc5Q9R1X5 1436 aa20.08■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Gm21190A0A0G2JGJ6 266 aa20.08■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Apaf1O88879 1249 aa20.08■□□□□ 0.8
Col17a1-201ENSMUST00000026045 OptnQ8K3K8 584 aa20.08■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Swt1Q9DBQ9 907 aa20.08■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Phactr2B1AVP0 632 aa20.08■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Fam193aQ8CGI1 1231 aaKnown RBP20.07■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Ric3Q8BPM6 367 aa20.07■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Ift57Q8BXG3 429 aa20.06■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Crocc2F6XLV1 1638 aa20.06■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Slx4Q6P1D7 1565 aa20.06■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Zkscan1Q8BGS3 561 aaKnown RBP20.06■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Ciz1Q8VEH2 845 aa20.06■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Gcom1E9PZ54 550 aa20.05■□□□□ 0.8
Col17a1-201ENSMUST00000026045 MyzapQ3UIJ9 466 aa20.05■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Gnai1B2RSH2 354 aa20.05■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Gnai3Q9DC51 354 aa20.05■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Ankrd26Q811D2 1581 aa20.05■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Tpm4Q6IRU2 248 aa20.05■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Otud6bQ8K2H2 294 aa20.05■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Dctn1O08788 1281 aa20.04■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Fmnl2A2APV2 1086 aa20.04■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Spag5Q7TME2 1165 aa20.04■□□□□ 0.8
Col17a1-201ENSMUST00000026045 1700010I14RikQ7TPG0 532 aa20.04■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Nol12Q8BG17 217 aa20.03■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Smc3Q9CW03 1217 aaKnown RBP20.03■□□□□ 0.8
Col17a1-201ENSMUST00000026045 PdcQ9QW08 244 aa20.02■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Liat1Q810M6 228 aa20.02■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Ipo7Q9EPL8 1038 aaKnown RBP20.02■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Gm14025A2AP89 1413 aa20.02■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 73.4 ms