RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Pank1Q8K4K6 548 aa20.25■□□□□ 0.83
Col17a1-201ENSMUST00000026045 Ccer1Q9CQL2 403 aa20.24■□□□□ 0.83
Col17a1-201ENSMUST00000026045 NaspQ99MD9 773 aaKnown RBP20.24■□□□□ 0.83
Col17a1-201ENSMUST00000026045 Ppp2r1aQ76MZ3 589 aa20.23■□□□□ 0.83
Col17a1-201ENSMUST00000026045 Naip2Q9QUK4 1447 aa20.23■□□□□ 0.83
Col17a1-201ENSMUST00000026045 Cabp4Q8VHC5 271 aa20.23■□□□□ 0.83
Col17a1-201ENSMUST00000026045 Eif4g2Q62448 906 aaKnown RBP20.23■□□□□ 0.83
Col17a1-201ENSMUST00000026045 MecomP14404 1042 aa20.22■□□□□ 0.83
Col17a1-201ENSMUST00000026045 Kcnj4P52189 445 aa20.22■□□□□ 0.83
Col17a1-201ENSMUST00000026045 PogkQ80TC5 607 aa20.22■□□□□ 0.83
Col17a1-201ENSMUST00000026045 Brpf1B2RRD7 1212 aa20.21■□□□□ 0.83
Col17a1-201ENSMUST00000026045 Ap3b2Q9JME5 1082 aa20.21■□□□□ 0.83
Col17a1-201ENSMUST00000026045 Anapc15-psA0A140T8L6 141 aa20.21■□□□□ 0.83
Col17a1-201ENSMUST00000026045 Wdr62Q3U3T8 1523 aa20.2■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Il16O54824 1322 aa20.2■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Plekhg5Q66T02 1073 aa20.19■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Pabpn1Q8CCS6 302 aaKnown RBP20.19■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Tex2Q6ZPJ0 1128 aaKnown RBP20.19■□□□□ 0.82
Col17a1-201ENSMUST00000026045 CastP51125 788 aa20.19■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Cc2d1aQ8K1A6 943 aa20.19■□□□□ 0.82
Col17a1-201ENSMUST00000026045 AqrQ8CFQ3 1481 aaKnown RBP20.18■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Mical1Q8VDP3 1048 aa20.18■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Plekhh1Q80TI1 1356 aa20.17■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Ccdc141E9Q8Q6 1531 aa20.17■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Mrc2Q64449 1479 aa20.17■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Atl3Q91YH5 541 aa20.17■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Rufy1Q8BIJ7 712 aa20.17■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Olfml1Q8BSH2 233 aa20.17■□□□□ 0.82
Col17a1-201ENSMUST00000026045 NexmifQ5DTT1 1515 aa20.16■□□□□ 0.82
Col17a1-201ENSMUST00000026045 A2mQ6GQT1 1474 aa20.16■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Gsto1O09131 240 aa20.16■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Kcnh8P59111 1102 aa20.16■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Fam163aQ8CAA5 168 aa20.16■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Plb1Q3TTY0 1478 aa20.16■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Slc4a10Q5DTL9 1118 aa20.15■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Rab3gap2Q8BMG7 1366 aa20.15■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Mcm4P49717 862 aa20.15■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Sptbn5F6UCX4 1208 aa20.14■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Lamc3Q9R0B6 1581 aa20.14■□□□□ 0.82
Col17a1-201ENSMUST00000026045 Nop14Q8R3N1 860 aaKnown RBP20.14■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Chaf1aQ9QWF0 911 aa20.14■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Mex3cQ05A36 652 aaKnown RBP20.14■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Tpm1P58771 284 aa20.14■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Bicd2Q921C5 820 aa20.14■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Nectin2P32507 530 aa20.13■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Arglu1Q3UL36 271 aaKnown RBP20.13■□□□□ 0.81
Col17a1-201ENSMUST00000026045 MlecQ6ZQI3 291 aaKnown RBP20.13■□□□□ 0.81
Col17a1-201ENSMUST00000026045 KinQ8K339 391 aa20.13■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Triml2E9PW10 424 aa20.13■□□□□ 0.81
Col17a1-201ENSMUST00000026045 TchhA0A0B4J1F9 1599 aa20.12■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Ppp2r3aB2RXC8 1150 aa20.12■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Fez2Q6TYB5 348 aa20.12■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Nutm1Q8BHP2 1126 aa20.12■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Q9D9H8 365 aa20.12■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Pdcl2Q78Y63 240 aa20.12■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Usp16Q99LG0 825 aa20.11■□□□□ 0.81
Col17a1-201ENSMUST00000026045 SynmQ70IV5 1561 aa20.11■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Nol10Q5RJG1 687 aaKnown RBP20.11■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Rbm25B2RY56 838 aaKnown RBP20.11■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Ccdc83Q9D4V3 305 aa20.11■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Mug1P28665 1476 aa20.11■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Frmd3Q8BHD4 595 aa20.1■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Atp2b2Q9R0K7 1198 aa20.1■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Gabpb2P81069 414 aa20.09■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Rsph6aQ8CDR2 708 aa20.09■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Fgd6Q69ZL1 1399 aa20.09■□□□□ 0.81
Col17a1-201ENSMUST00000026045 A0A0U1RNP2 1173 aa20.09■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Chmp3Q9CQ10 224 aa20.09■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Sparcl1P70663 650 aa20.08■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Tmco3Q8BH01 678 aa20.08■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Abcc5Q9R1X5 1436 aa20.08■□□□□ 0.81
Col17a1-201ENSMUST00000026045 Gm21190A0A0G2JGJ6 266 aa20.08■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Apaf1O88879 1249 aa20.08■□□□□ 0.8
Col17a1-201ENSMUST00000026045 OptnQ8K3K8 584 aa20.08■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Swt1Q9DBQ9 907 aa20.08■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Phactr2B1AVP0 632 aa20.08■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Fam193aQ8CGI1 1231 aaKnown RBP20.07■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Ric3Q8BPM6 367 aa20.07■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Ift57Q8BXG3 429 aa20.06■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Crocc2F6XLV1 1638 aa20.06■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Slx4Q6P1D7 1565 aa20.06■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Zkscan1Q8BGS3 561 aaKnown RBP20.06■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Ciz1Q8VEH2 845 aa20.06■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Gcom1E9PZ54 550 aa20.05■□□□□ 0.8
Col17a1-201ENSMUST00000026045 MyzapQ3UIJ9 466 aa20.05■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Gnai1B2RSH2 354 aa20.05■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Gnai3Q9DC51 354 aa20.05■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Ankrd26Q811D2 1581 aa20.05■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Tpm4Q6IRU2 248 aa20.05■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Otud6bQ8K2H2 294 aa20.05■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Dctn1O08788 1281 aa20.04■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Fmnl2A2APV2 1086 aa20.04■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Spag5Q7TME2 1165 aa20.04■□□□□ 0.8
Col17a1-201ENSMUST00000026045 1700010I14RikQ7TPG0 532 aa20.04■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Nol12Q8BG17 217 aa20.03■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Smc3Q9CW03 1217 aaKnown RBP20.03■□□□□ 0.8
Col17a1-201ENSMUST00000026045 PdcQ9QW08 244 aa20.02■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Liat1Q810M6 228 aa20.02■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Ipo7Q9EPL8 1038 aaKnown RBP20.02■□□□□ 0.8
Col17a1-201ENSMUST00000026045 Gm14025A2AP89 1413 aa20.02■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms