RNA–Protein interactions for RNA: ENSMUST00000023452.13

Ccdc116-201, Transcript of Coiled-coil domain-containing protein 116, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc116, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116-201ENSMUST00000023452 Znf608Q56A10 1511 aa11.36□□□□□ -0.59
Ccdc116-201ENSMUST00000023452 Abcc2Q8VI47 1543 aa11.36□□□□□ -0.59
Ccdc116-201ENSMUST00000023452 HnrnpmQ9D0E1 729 aaKnown RBP11.36□□□□□ -0.59
Ccdc116-201ENSMUST00000023452 Cavin4A2AMM0 362 aa11.35□□□□□ -0.59
Ccdc116-201ENSMUST00000023452 Maco1Q7TQE6 664 aaKnown RBP11.35□□□□□ -0.59
Ccdc116-201ENSMUST00000023452 Ric3Q8BPM6 367 aa11.35□□□□□ -0.59
Ccdc116-201ENSMUST00000023452 Asxl2Q8BZ32 1370 aa11.35□□□□□ -0.59
Ccdc116-201ENSMUST00000023452 PtmaP26350 111 aa11.35□□□□□ -0.59
Ccdc116-201ENSMUST00000023452 Pprc1Q6NZN1 1644 aa11.35□□□□□ -0.59
Ccdc116-201ENSMUST00000023452 Slc12a5Q91V14 1138 aa11.35□□□□□ -0.59
Ccdc116-201ENSMUST00000023452 Abcc1O35379 1528 aa11.35□□□□□ -0.59
Ccdc116-201ENSMUST00000023452 Uspl1Q3ULM6 1089 aa11.34□□□□□ -0.59
Ccdc116-201ENSMUST00000023452 Mre11Q61216 706 aa11.34□□□□□ -0.59
Ccdc116-201ENSMUST00000023452 MlecQ6ZQI3 291 aaKnown RBP11.34□□□□□ -0.59
Ccdc116-201ENSMUST00000023452 Smc5Q8CG46 1101 aaKnown RBP11.34□□□□□ -0.59
Ccdc116-201ENSMUST00000023452 Trim44Q9QXA7 346 aa11.34□□□□□ -0.59
Ccdc116-201ENSMUST00000023452 DroshaQ5HZJ0 1373 aaKnown RBP11.34□□□□□ -0.59
Ccdc116-201ENSMUST00000023452 Supt6hQ62383 1726 aaKnown RBP11.34□□□□□ -0.59
Ccdc116-201ENSMUST00000023452 Cog6Q8R3I3 657 aa11.34□□□□□ -0.59
Ccdc116-201ENSMUST00000023452 Ggnbp2Q5SV77 696 aa11.33□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Ppp2r3aB2RXC8 1150 aa11.33□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Kiaa1551Q5DTW7 1521 aa11.33□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 HnrnpuQ8VEK3 800 aaKnown RBP11.33□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Q4VA45 678 aa11.32□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Nek4Q9Z1J2 792 aa11.32□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Lrriq1Q0P5X1 1673 aa11.32□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.32□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Ppp1r3fQ9JIG4 799 aa11.32□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Chmp4bQ9D8B3 224 aaKnown RBP11.32□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Bcl2l13P59017 434 aa11.31□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Abcc6Q9R1S7 1498 aa11.31□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Duxf3A0A0N4SV92 674 aa11.31□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 SlkO54988 1233 aa11.31□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Edc4Q3UJB9 1406 aaKnown RBP11.31□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Ap3b2Q9JME5 1082 aa11.31□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Mroh2aD3Z750 1679 aa11.31□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Gtf3c3Q3TMP1 882 aa11.3□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Gm156Q58A37 223 aa11.3□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Tarbp1E9Q368 1579 aa11.3□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Klhdc4Q921I2 584 aa11.3□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 OvosQ3UU35 1456 aa11.3□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Adgrl2Q8JZZ7 1487 aa11.3□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Cul7Q8VE73 1689 aa11.3□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Map3k4O08648 1597 aa11.3□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Eif4g2Q62448 906 aaKnown RBP11.3□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Gnai1B2RSH2 354 aa11.29□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Slc4a10Q5DTL9 1118 aa11.29□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Cdc37l1Q9CZP7 335 aa11.29□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Gnai3Q9DC51 354 aa11.29□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Slc52a2Q9D8F3 450 aa11.29□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Rusc2Q80U22 1514 aa11.29□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Kif18aQ91WD7 886 aa11.28□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 FanciQ8K368 1330 aa11.28□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Rabep1O35551 862 aa11.28□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 AatkQ80YE4 1365 aa11.28□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 Map4k4P97820 1233 aaKnown RBP11.28□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 SkilQ60665 675 aa11.27□□□□□ -0.6
Ccdc116-201ENSMUST00000023452 NinlQ6ZQ12 1394 aa11.27□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Q9D2X8 372 aa11.27□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Pnmal2G3X9N3 661 aa11.27□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Brpf1B2RRD7 1212 aa11.26□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Atl3Q91YH5 541 aa11.26□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Rlbp1Q9Z275 317 aa11.26□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Ptch1Q61115 1434 aa11.26□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Tfip11Q9ERA6 838 aaKnown RBP11.26□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Fmn2Q9JL04 1578 aa11.25□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Plekhm2Q80TQ5 1018 aa11.25□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Fam208aQ69ZR9 1610 aaKnown RBP11.25□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Cdc42bpaQ3UU96 1719 aa11.25□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Dot1lQ6XZL8 1540 aa11.25□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Plcd4Q8K3R3 807 aa11.25□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Smarca5Q91ZW3 1051 aaKnown RBP11.25□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Erich6bQ9D4S6 220 aa11.24□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Q3UPC7 1272 aa11.24□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Nol12Q8BG17 217 aa11.24□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Gm16486A0A1D5RMD1 1434 aa11.24□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Gapvd1Q6PAR5 1458 aa11.24□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 CastP51125 788 aa11.24□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Mbd5B1AYB6 1498 aa11.23□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Phactr2B1AVP0 632 aa11.23□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Fhod3Q76LL6 1578 aa11.23□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 AU022751B1B0V2 589 aa11.23□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Sv2bQ8BG39 683 aa11.23□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 AU019823E9PUQ3 292 aa11.22□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Pcmtd1P59913 357 aa11.22□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Sptbn5F6UCX4 1208 aa11.22□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Hmox1P14901 289 aa11.21□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Lmod3E9QA62 571 aa11.21□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 Rsph4aQ8BYM7 716 aa11.21□□□□□ -0.61
Ccdc116-201ENSMUST00000023452 TnikP83510 1323 aa11.21□□□□□ -0.62
Ccdc116-201ENSMUST00000023452 TmpoQ61033 693 aaKnown RBP11.21□□□□□ -0.62
Ccdc116-201ENSMUST00000023452 Ccdc171E9Q1U1 1324 aa11.21□□□□□ -0.62
Ccdc116-201ENSMUST00000023452 P2rx7Q9Z1M0 595 aa11.2□□□□□ -0.62
Ccdc116-201ENSMUST00000023452 Setbp1Q9Z180 1582 aa11.2□□□□□ -0.62
Ccdc116-201ENSMUST00000023452 Atf7ipQ7TT18 1306 aa11.2□□□□□ -0.62
Ccdc116-201ENSMUST00000023452 Mast1Q9R1L5 1570 aa11.2□□□□□ -0.62
Ccdc116-201ENSMUST00000023452 Kdm2bQ6P1G2 1309 aa11.2□□□□□ -0.62
Ccdc116-201ENSMUST00000023452 Fkbp4P30416 458 aa11.19□□□□□ -0.62
Ccdc116-201ENSMUST00000023452 Nkx1-2P42580 305 aa11.19□□□□□ -0.62
Ccdc116-201ENSMUST00000023452 Ciz1Q8VEH2 845 aa11.19□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms