RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C YBR201C-AQ2V2Q3 67 aa0.59□□□□□ -2.31
CUP9YPL177C FKS3Q04952 1785 aa0.59□□□□□ -2.32
CUP9YPL177C TY2B-LR1P0C2J3 1770 aa0.58□□□□□ -2.32
CUP9YPL177C TY2B-FP0CX63 1770 aa0.58□□□□□ -2.32
CUP9YPL177C TY2B-GR2P0CX64 1770 aa0.58□□□□□ -2.32
CUP9YPL177C TY2B-DR2Q03494 1770 aa0.58□□□□□ -2.32
CUP9YPL177C TY2B-OR1Q12113 1770 aa0.58□□□□□ -2.32
CUP9YPL177C TY2B-BQ12491 1770 aa0.58□□□□□ -2.32
CUP9YPL177C TY2B-OR2Q12501 1770 aa0.58□□□□□ -2.32
CUP9YPL177C FPR2P32472 135 aa0.58□□□□□ -2.32
CUP9YPL177C ATX1P38636 73 aa0.58□□□□□ -2.32
CUP9YPL177C RPS29BP41058 56 aaKnown RBP0.58□□□□□ -2.32
CUP9YPL177C ARO1P08566 1588 aaKnown RBP0.57□□□□□ -2.32
CUP9YPL177C TY1B-JR2P47100 1755 aaKnown RBP0.57□□□□□ -2.32
CUP9YPL177C TY1B-ER2Q03619 1755 aa0.57□□□□□ -2.32
CUP9YPL177C TY1B-MR1Q04214 1755 aa0.57□□□□□ -2.32
CUP9YPL177C TY1B-MR2Q04670 1755 aaKnown RBP0.57□□□□□ -2.32
CUP9YPL177C TY2B-DR3Q07791 1770 aaKnown RBP0.57□□□□□ -2.32
CUP9YPL177C TY1B-LR1Q12088 1755 aaKnown RBP0.57□□□□□ -2.32
CUP9YPL177C TY1B-NL1Q12112 1755 aa0.57□□□□□ -2.32
CUP9YPL177C TY1B-GR1Q12141 1755 aa0.57□□□□□ -2.32
CUP9YPL177C YOR032W-AQ8TGS1 66 aa0.57□□□□□ -2.32
CUP9YPL177C Q0032Q9ZZX7 96 aa0.57□□□□□ -2.32
CUP9YPL177C MYO4P32492 1471 aa0.56□□□□□ -2.32
CUP9YPL177C RPO21P04050 1733 aaKnown RBP0.56□□□□□ -2.32
CUP9YPL177C RRP5Q05022 1729 aaKnown RBP0.56□□□□□ -2.32
CUP9YPL177C RPC10P40422 70 aa0.56□□□□□ -2.32
CUP9YPL177C YNL190WP53872 204 aa0.56□□□□□ -2.32
CUP9YPL177C VMA9Q3E7B6 73 aa0.56□□□□□ -2.32
CUP9YPL177C SMC4Q12267 1418 aa0.55□□□□□ -2.32
CUP9YPL177C MDN1Q12019 4910 aaKnown RBP0.55□□□□□ -2.32
CUP9YPL177C YKL018C-AQ3E7A7 99 aa0.55□□□□□ -2.32
CUP9YPL177C MMS1Q06211 1407 aa0.55□□□□□ -2.32
CUP9YPL177C TY3B-GQ99315 1547 aa0.54□□□□□ -2.32
CUP9YPL177C COX7P10174 60 aa0.54□□□□□ -2.32
CUP9YPL177C ATP18P81450 59 aa0.54□□□□□ -2.32
CUP9YPL177C YIL102C-AQ2V2P5 75 aa0.54□□□□□ -2.32
CUP9YPL177C YCF1P39109 1515 aaKnown RBP0.54□□□□□ -2.32
CUP9YPL177C MON2P48563 1636 aaPredicted RBP0.53□□□□□ -2.32
CUP9YPL177C DNF2Q12675 1612 aa0.53□□□□□ -2.32
CUP9YPL177C ATP17Q06405 101 aa0.53□□□□□ -2.32
CUP9YPL177C YIL134C-AQ45U18 67 aa0.53□□□□□ -2.32
CUP9YPL177C YOL166W-AQ8TGJ1 51 aa0.53□□□□□ -2.32
CUP9YPL177C YJR107C-AP0CT86 78 aa0.52□□□□□ -2.33
CUP9YPL177C YSY6P38374 65 aa0.52□□□□□ -2.33
CUP9YPL177C PAU7P39545 55 aa0.52□□□□□ -2.33
CUP9YPL177C EDC1P53080 175 aaPredicted RBP0.52□□□□□ -2.33
CUP9YPL177C YDR182W-AQ3E796 67 aa0.52□□□□□ -2.33
CUP9YPL177C YOL097W-AQ3E7Y9 61 aa0.52□□□□□ -2.33
CUP9YPL177C IQG1Q12280 1495 aa0.52□□□□□ -2.33
CUP9YPL177C IML1P47170 1584 aa0.52□□□□□ -2.33
CUP9YPL177C SPT6P23615 1451 aaKnown RBP0.51□□□□□ -2.33
CUP9YPL177C YBR016WP38216 128 aa0.51□□□□□ -2.33
CUP9YPL177C RPL38P49167 78 aaKnown RBP0.51□□□□□ -2.33
CUP9YPL177C APC1P53886 1748 aa0.51□□□□□ -2.33
CUP9YPL177C BCK1Q01389 1478 aa0.51□□□□□ -2.33
CUP9YPL177C SDH6Q3E785 79 aa0.51□□□□□ -2.33
CUP9YPL177C VTH1P40438 1549 aa0.5□□□□□ -2.33
CUP9YPL177C VTH2P40890 1549 aa0.5□□□□□ -2.33
CUP9YPL177C SGF11Q03067 99 aa0.5□□□□□ -2.33
CUP9YPL177C SEN1Q00416 2231 aaKnown RBP0.5□□□□□ -2.33
CUP9YPL177C HAP1P0CE41 1502 aa0.49□□□□□ -2.33
CUP9YPL177C RPS30AP0CX33 63 aaKnown RBP0.49□□□□□ -2.33
CUP9YPL177C RPS30BP0CX34 63 aaKnown RBP0.49□□□□□ -2.33
CUP9YPL177C RPS27AP35997 82 aaKnown RBP0.49□□□□□ -2.33
CUP9YPL177C YBR200W-AQ3E755 54 aa0.49□□□□□ -2.33
CUP9YPL177C YPR108W-AQ3E7B3 70 aa0.49□□□□□ -2.33
CUP9YPL177C CDC25P04821 1589 aa0.49□□□□□ -2.33
CUP9YPL177C YBR032WP38223 100 aa0.48□□□□□ -2.33
CUP9YPL177C YKL023C-AQ2V2P3 75 aa0.48□□□□□ -2.33
CUP9YPL177C SNQ2P32568 1501 aaKnown RBP0.48□□□□□ -2.33
CUP9YPL177C PDR5P33302 1511 aaKnown RBP0.48□□□□□ -2.33
CUP9YPL177C HKR1P41809 1802 aa0.48□□□□□ -2.33
CUP9YPL177C YOR192C-CQ3E736 78 aa0.47□□□□□ -2.33
CUP9YPL177C YOR011W-AQ3E807 68 aa0.47□□□□□ -2.33
CUP9YPL177C YBT1P32386 1661 aa0.46□□□□□ -2.34
CUP9YPL177C VMR1P38735 1592 aa0.46□□□□□ -2.34
CUP9YPL177C SSK2P53599 1579 aa0.46□□□□□ -2.34
CUP9YPL177C IRC20Q06554 1556 aa0.46□□□□□ -2.34
CUP9YPL177C YFR009W-AP0C5M9 85 aa0.46□□□□□ -2.34
CUP9YPL177C TOR1P35169 2470 aa0.46□□□□□ -2.34
CUP9YPL177C PEP1P32319 1579 aa0.45□□□□□ -2.34
CUP9YPL177C YBL039W-BP0C268 59 aa0.45□□□□□ -2.34
CUP9YPL177C SPO14P36126 1683 aa0.44□□□□□ -2.34
CUP9YPL177C HUB1Q6Q546 73 aa0.44□□□□□ -2.34
CUP9YPL177C YOR394C-AQ8TGJ0 55 aa0.44□□□□□ -2.34
CUP9YPL177C PDR15Q04182 1529 aaKnown RBP0.43□□□□□ -2.34
CUP9YPL177C YOR093CQ12275 1648 aa0.43□□□□□ -2.34
CUP9YPL177C YBL044WP38194 122 aa0.43□□□□□ -2.34
CUP9YPL177C NUP188P52593 1655 aaKnown RBP0.43□□□□□ -2.34
CUP9YPL177C RPS27BP38711 82 aa0.42□□□□□ -2.34
CUP9YPL177C YMR001C-AQ8TGS9 76 aa0.42□□□□□ -2.34
CUP9YPL177C TAO3P40468 2376 aa0.42□□□□□ -2.34
CUP9YPL177C YGR025WP53216 100 aa0.41□□□□□ -2.34
CUP9YPL177C GCN1P33892 2672 aaKnown RBP0.41□□□□□ -2.34
CUP9YPL177C ULS1Q08562 1619 aa0.4□□□□□ -2.35
CUP9YPL177C YLR146W-AQ2V2P1 62 aa0.4□□□□□ -2.35
CUP9YPL177C YLR157W-DP0CE99 70 aa0.39□□□□□ -2.35
CUP9YPL177C KOG1P38873 1557 aa0.38□□□□□ -2.35
CUP9YPL177C STU1P38198 1513 aa0.38□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms