RNA–Protein interactions for RNA: YMR308C

PSE1, Transcript of Karyopherin/importin that interacts with the nuclear pore complex, yeastyeast

Gene PSE1, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSE1YMR308C YMR321CQ04898 105 aa3.52□□□□□ -1.85
PSE1YMR308C HUG1Q6Q5K6 68 aa3.52□□□□□ -1.85
PSE1YMR308C YHR032W-AP0C5N6 59 aa3.5□□□□□ -1.85
PSE1YMR308C RPL38P49167 78 aaKnown RBP3.5□□□□□ -1.85
PSE1YMR308C FLO1P32768 1537 aa3.5□□□□□ -1.85
PSE1YMR308C MRPS12P53732 153 aa3.49□□□□□ -1.85
PSE1YMR308C MGR2Q02889 113 aa3.48□□□□□ -1.85
PSE1YMR308C YDR461C-AQ2V2P7 80 aa3.48□□□□□ -1.85
PSE1YMR308C YJL027CP47063 138 aaPredicted RBP3.47□□□□□ -1.85
PSE1YMR308C YBR219CP38317 127 aa3.46□□□□□ -1.85
PSE1YMR308C YEL014CP39999 101 aa3.45□□□□□ -1.86
PSE1YMR308C YMR141CP40211 102 aa3.45□□□□□ -1.86
PSE1YMR308C YJR107C-AP0CT86 78 aa3.45□□□□□ -1.86
PSE1YMR308C YPR195CQ06594 109 aa3.45□□□□□ -1.86
PSE1YMR308C YIL102CP40488 101 aa3.44□□□□□ -1.86
PSE1YMR308C LCL2Q08045 131 aa3.43□□□□□ -1.86
PSE1YMR308C YPR108W-AQ3E7B3 70 aa3.43□□□□□ -1.86
PSE1YMR308C AQY2P0CD90 149 aa3.43□□□□□ -1.86
PSE1YMR308C DAD4P69851 72 aa3.43□□□□□ -1.86
PSE1YMR308C YDR115WQ04598 105 aa3.43□□□□□ -1.86
PSE1YMR308C BLM10P43583 2143 aa3.42□□□□□ -1.86
PSE1YMR308C YDR210WQ03482 75 aa3.42□□□□□ -1.86
PSE1YMR308C YSF3P0C074 85 aaPredicted RBP3.41□□□□□ -1.86
PSE1YMR308C TOS6P48560 102 aa3.41□□□□□ -1.86
PSE1YMR308C ATP17Q06405 101 aa3.41□□□□□ -1.86
PSE1YMR308C HUB1Q6Q546 73 aa3.41□□□□□ -1.86
PSE1YMR308C YOL085CQ99345 113 aa3.41□□□□□ -1.86
PSE1YMR308C ACC1Q00955 2233 aaKnown RBP3.41□□□□□ -1.86
PSE1YMR308C COX8P04039 78 aa3.41□□□□□ -1.86
PSE1YMR308C YCL048W-AQ2V2Q2 79 aa3.41□□□□□ -1.86
PSE1YMR308C YAL067W-AQ8TGK6 75 aa3.4□□□□□ -1.86
PSE1YMR308C YCR001WP25347 104 aa3.4□□□□□ -1.87
PSE1YMR308C YGL014C-AP0C5N1 53 aa3.39□□□□□ -1.87
PSE1YMR308C SEN1Q00416 2231 aaKnown RBP3.39□□□□□ -1.87
PSE1YMR308C YLR157W-DP0CE99 70 aa3.39□□□□□ -1.87
PSE1YMR308C YNL122CP53921 115 aaPredicted RBP3.38□□□□□ -1.87
PSE1YMR308C ATP18P81450 59 aa3.38□□□□□ -1.87
PSE1YMR308C SGF11Q03067 99 aa3.38□□□□□ -1.87
PSE1YMR308C YMR001C-AQ8TGS9 76 aa3.38□□□□□ -1.87
PSE1YMR308C YMR122W-AQ3E842 84 aa3.36□□□□□ -1.87
PSE1YMR308C YFR009W-AP0C5M9 85 aa3.36□□□□□ -1.87
PSE1YMR308C YOR008C-AQ3E7B9 74 aa3.36□□□□□ -1.87
PSE1YMR308C YPR010C-AA5Z2X5 72 aa3.35□□□□□ -1.87
PSE1YMR308C RPL33BP41056 107 aaKnown RBP3.34□□□□□ -1.87
PSE1YMR308C YJR146WP47174 117 aa3.34□□□□□ -1.88
PSE1YMR308C YMR254CQ04838 102 aa3.34□□□□□ -1.88
PSE1YMR308C YLR255CO13574 117 aa3.33□□□□□ -1.88
PSE1YMR308C SDH6Q3E785 79 aa3.33□□□□□ -1.88
PSE1YMR308C Q0032Q9ZZX7 96 aa3.32□□□□□ -1.88
PSE1YMR308C VAM10Q08474 114 aa3.31□□□□□ -1.88
PSE1YMR308C YBR201C-AQ2V2Q3 67 aa3.31□□□□□ -1.88
PSE1YMR308C YOL013W-AP0C272 63 aaPredicted RBP3.29□□□□□ -1.88
PSE1YMR308C BEM2P39960 2167 aaKnown RBP3.29□□□□□ -1.88
PSE1YMR308C MVB12P42939 101 aa3.29□□□□□ -1.88
PSE1YMR308C YER084WP40057 128 aa3.28□□□□□ -1.88
PSE1YMR308C YEL008WP40001 126 aa3.27□□□□□ -1.89
PSE1YMR308C YGL258W-AQ3E740 77 aa3.27□□□□□ -1.89
PSE1YMR308C YFL067WP43537 175 aa3.27□□□□□ -1.89
PSE1YMR308C YDR114CQ04597 100 aa3.27□□□□□ -1.89
PSE1YMR308C RPL33AP05744 107 aaKnown RBP3.26□□□□□ -1.89
PSE1YMR308C YBL039W-BP0C268 59 aa3.24□□□□□ -1.89
PSE1YMR308C YDL012CQ12489 107 aa3.24□□□□□ -1.89
PSE1YMR308C YGL041C-BQ3E750 60 aa3.24□□□□□ -1.89
PSE1YMR308C YLR342W-AQ3E810 57 aa3.24□□□□□ -1.89
PSE1YMR308C FAB1P34756 2278 aa3.24□□□□□ -1.89
PSE1YMR308C YCL042WP25572 119 aa3.24□□□□□ -1.89
PSE1YMR308C YOR072WQ08486 104 aa3.23□□□□□ -1.89
PSE1YMR308C YLR122CQ12312 125 aa3.22□□□□□ -1.89
PSE1YMR308C TAR1Q8TGM6 124 aa3.22□□□□□ -1.89
PSE1YMR308C SEC16P48415 2195 aaKnown RBP3.2□□□□□ -1.9
PSE1YMR308C YKR073CP36153 106 aa3.2□□□□□ -1.9
PSE1YMR308C YLL006W-AQ3E814 58 aa3.19□□□□□ -1.9
PSE1YMR308C AUA1P32450 94 aa3.19□□□□□ -1.9
PSE1YMR308C YJL144WP47009 104 aa3.19□□□□□ -1.9
PSE1YMR308C YGR240C-AQ3E786 66 aa3.18□□□□□ -1.9
PSE1YMR308C YHR213W-BQ8TGK1 99 aa3.18□□□□□ -1.9
PSE1YMR308C YBR200W-AQ3E755 54 aa3.17□□□□□ -1.9
PSE1YMR308C URA2P07259 2214 aaKnown RBP3.17□□□□□ -1.9
PSE1YMR308C RPL43AP0CX25 92 aaKnown RBP3.16□□□□□ -1.9
PSE1YMR308C RPL43BP0CX26 92 aa3.16□□□□□ -1.9
PSE1YMR308C YJL133C-AQ3E7A3 74 aa3.14□□□□□ -1.91
PSE1YMR308C YOL097W-AQ3E7Y9 61 aa3.14□□□□□ -1.91
PSE1YMR308C YJR128WP47162 119 aa3.14□□□□□ -1.91
PSE1YMR308C YGR025WP53216 100 aa3.13□□□□□ -1.91
PSE1YMR308C LCL1Q02786 101 aa3.13□□□□□ -1.91
PSE1YMR308C POL2P21951 2222 aaKnown RBP3.12□□□□□ -1.91
PSE1YMR308C YIL086CP40503 102 aa3.1□□□□□ -1.91
PSE1YMR308C SIP18P50263 79 aa3.09□□□□□ -1.91
PSE1YMR308C YHR007C-AQ07074 71 aa3.09□□□□□ -1.91
PSE1YMR308C YOR011W-AQ3E807 68 aa3.09□□□□□ -1.91
PSE1YMR308C NCE101Q02820 53 aa3.09□□□□□ -1.92
PSE1YMR308C YAR064WP39563 99 aa3.07□□□□□ -1.92
PSE1YMR308C GIS2P53849 153 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
PSE1YMR308C YOR394C-AQ8TGJ0 55 aa3.05□□□□□ -1.92
PSE1YMR308C COX7P10174 60 aa3.04□□□□□ -1.92
PSE1YMR308C RDS3Q06835 107 aaPredicted RBP3.01□□□□□ -1.93
PSE1YMR308C RPS27AP35997 82 aaKnown RBP3.01□□□□□ -1.93
PSE1YMR308C YNL162W-AQ3E7A8 72 aa3.01□□□□□ -1.93
PSE1YMR308C YJL127C-BQ3E828 52 aa2.99□□□□□ -1.93
PSE1YMR308C RPL29P05747 59 aaPredicted RBP2.99□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms