RNA–Protein interactions for RNA: YKL062W

MSN4, Transcript of Stress-responsive transcriptional activator, yeastyeast

Gene MSN4, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN4YKL062W YIL086CP40503 102 aa2.28□□□□□ -2.04
MSN4YKL062W URB1P34241 1764 aaKnown RBP2.27□□□□□ -2.05
MSN4YKL062W SHU1P38751 150 aa2.27□□□□□ -2.05
MSN4YKL062W PAU7P39545 55 aa2.27□□□□□ -2.05
MSN4YKL062W BCK1Q01389 1478 aa2.27□□□□□ -2.05
MSN4YKL062W APC1P53886 1748 aa2.27□□□□□ -2.05
MSN4YKL062W HFA1P32874 2273 aa2.26□□□□□ -2.05
MSN4YKL062W YBR201C-AQ2V2Q3 67 aa2.26□□□□□ -2.05
MSN4YKL062W TY3B-GQ99315 1547 aa2.26□□□□□ -2.05
MSN4YKL062W IML1P47170 1584 aa2.25□□□□□ -2.05
MSN4YKL062W IRC20Q06554 1556 aa2.25□□□□□ -2.05
MSN4YKL062W YOL013W-AP0C272 63 aaPredicted RBP2.24□□□□□ -2.05
MSN4YKL062W YCR001WP25347 104 aa2.24□□□□□ -2.05
MSN4YKL062W YMR007WQ03675 126 aa2.24□□□□□ -2.05
MSN4YKL062W YOR034C-AQ3E735 80 aa2.24□□□□□ -2.05
MSN4YKL062W HUG1Q6Q5K6 68 aa2.24□□□□□ -2.05
MSN4YKL062W SEC16P48415 2195 aaKnown RBP2.24□□□□□ -2.05
MSN4YKL062W YNL190WP53872 204 aa2.23□□□□□ -2.05
MSN4YKL062W Q0032Q9ZZX7 96 aa2.23□□□□□ -2.05
MSN4YKL062W DNF2Q12675 1612 aa2.23□□□□□ -2.05
MSN4YKL062W PEP1P32319 1579 aa2.23□□□□□ -2.05
MSN4YKL062W POL2P21951 2222 aaKnown RBP2.22□□□□□ -2.05
MSN4YKL062W MVB12P42939 101 aa2.22□□□□□ -2.05
MSN4YKL062W RIM15P43565 1770 aa2.22□□□□□ -2.05
MSN4YKL062W ULS1Q08562 1619 aa2.22□□□□□ -2.05
MSN4YKL062W YAR064WP39563 99 aa2.22□□□□□ -2.05
MSN4YKL062W SGF11Q03067 99 aa2.22□□□□□ -2.05
MSN4YKL062W YKL023C-AQ2V2P3 75 aa2.22□□□□□ -2.05
MSN4YKL062W SPO14P36126 1683 aa2.22□□□□□ -2.05
MSN4YKL062W BLM10P43583 2143 aa2.21□□□□□ -2.06
MSN4YKL062W YOR072WQ08486 104 aa2.21□□□□□ -2.06
MSN4YKL062W BEM2P39960 2167 aaKnown RBP2.2□□□□□ -2.06
MSN4YKL062W EDC1P53080 175 aaPredicted RBP2.2□□□□□ -2.06
MSN4YKL062W ATP17Q06405 101 aa2.2□□□□□ -2.06
MSN4YKL062W ARO1P08566 1588 aaKnown RBP2.19□□□□□ -2.06
MSN4YKL062W ATP18P81450 59 aa2.19□□□□□ -2.06
MSN4YKL062W RPS30AP0CX33 63 aaKnown RBP2.18□□□□□ -2.06
MSN4YKL062W RPS30BP0CX34 63 aaKnown RBP2.18□□□□□ -2.06
MSN4YKL062W YJR128WP47162 119 aa2.18□□□□□ -2.06
MSN4YKL062W YDR182W-AQ3E796 67 aa2.18□□□□□ -2.06
MSN4YKL062W DNF3Q12674 1656 aa2.17□□□□□ -2.06
MSN4YKL062W YBT1P32386 1661 aa2.16□□□□□ -2.06
MSN4YKL062W YOR192C-CQ3E736 78 aa2.15□□□□□ -2.07
MSN4YKL062W SDH6Q3E785 79 aa2.14□□□□□ -2.07
MSN4YKL062W YOL166W-AQ8TGJ1 51 aa2.14□□□□□ -2.07
MSN4YKL062W YOR093CQ12275 1648 aa2.13□□□□□ -2.07
MSN4YKL062W COX7P10174 60 aa2.12□□□□□ -2.07
MSN4YKL062W YOL097W-AQ3E7Y9 61 aa2.12□□□□□ -2.07
MSN4YKL062W STU1P38198 1513 aa2.11□□□□□ -2.07
MSN4YKL062W HHY1P39982 102 aa2.11□□□□□ -2.07
MSN4YKL062W HUB1Q6Q546 73 aa2.11□□□□□ -2.07
MSN4YKL062W NUP170P38181 1502 aa2.1□□□□□ -2.07
MSN4YKL062W URA2P07259 2214 aaKnown RBP2.1□□□□□ -2.07
MSN4YKL062W USO1P25386 1790 aa2.1□□□□□ -2.07
MSN4YKL062W NUP188P52593 1655 aaKnown RBP2.09□□□□□ -2.07
MSN4YKL062W YIL102CP40488 101 aa2.09□□□□□ -2.08
MSN4YKL062W RPC10P40422 70 aa2.07□□□□□ -2.08
MSN4YKL062W YPR108W-AQ3E7B3 70 aa2.07□□□□□ -2.08
MSN4YKL062W YMR141CP40211 102 aa2.06□□□□□ -2.08
MSN4YKL062W VMR1P38735 1592 aa2.05□□□□□ -2.08
MSN4YKL062W AUA1P32450 94 aa2.05□□□□□ -2.08
MSN4YKL062W YLR146W-AQ2V2P1 62 aa2.04□□□□□ -2.08
MSN4YKL062W RPL38P49167 78 aaKnown RBP2.03□□□□□ -2.09
MSN4YKL062W THO2P53552 1597 aaKnown RBP2.02□□□□□ -2.09
MSN4YKL062W YJR107C-AP0CT86 78 aa2.02□□□□□ -2.09
MSN4YKL062W SMX2P40204 77 aaKnown RBP2.02□□□□□ -2.09
MSN4YKL062W HUA1P40325 198 aa2.02□□□□□ -2.09
MSN4YKL062W YBR072C-AQ3E794 53 aa2.02□□□□□ -2.09
MSN4YKL062W YBL039W-BP0C268 59 aa2.01□□□□□ -2.09
MSN4YKL062W YHR213W-BQ8TGK1 99 aa2.01□□□□□ -2.09
MSN4YKL062W PDR15Q04182 1529 aaKnown RBP2.01□□□□□ -2.09
MSN4YKL062W YBR200W-AQ3E755 54 aa2□□□□□ -2.09
MSN4YKL062W YMR001C-AQ8TGS9 76 aa2□□□□□ -2.09
MSN4YKL062W YBR032WP38223 100 aa1.99□□□□□ -2.09
MSN4YKL062W KOG1P38873 1557 aa1.99□□□□□ -2.09
MSN4YKL062W YLR157W-DP0CE99 70 aa1.98□□□□□ -2.09
MSN4YKL062W SNF2P22082 1703 aa1.97□□□□□ -2.09
MSN4YKL062W MLP2P40457 1679 aa1.96□□□□□ -2.1
MSN4YKL062W YOR011W-AQ3E807 68 aa1.95□□□□□ -2.1
MSN4YKL062W CHC1P22137 1653 aaKnown RBP1.95□□□□□ -2.1
MSN4YKL062W RKR1Q04781 1562 aa1.94□□□□□ -2.1
MSN4YKL062W NUP192P47054 1683 aa1.92□□□□□ -2.1
MSN4YKL062W YOR394C-AQ8TGJ0 55 aa1.91□□□□□ -2.1
MSN4YKL062W RPS27AP35997 82 aaKnown RBP1.9□□□□□ -2.1
MSN4YKL062W RPL43AP0CX25 92 aaKnown RBP1.88□□□□□ -2.11
MSN4YKL062W RPL43BP0CX26 92 aa1.88□□□□□ -2.11
MSN4YKL062W HKR1P41809 1802 aa1.88□□□□□ -2.11
MSN4YKL062W YLR157W-EP0CF00 54 aa1.83□□□□□ -2.12
MSN4YKL062W YGR025WP53216 100 aa1.83□□□□□ -2.12
MSN4YKL062W YOL164W-AQ3E7A5 60 aa1.83□□□□□ -2.12
MSN4YKL062W YLR307C-AQ3E825 87 aa1.83□□□□□ -2.12
MSN4YKL062W OLI1P61829 76 aa1.82□□□□□ -2.12
MSN4YKL062W RPL37AP49166 88 aaKnown RBP1.81□□□□□ -2.12
MSN4YKL062W HIR3P47171 1648 aa1.8□□□□□ -2.12
MSN4YKL062W YPR010C-AA5Z2X5 72 aa1.8□□□□□ -2.12
MSN4YKL062W ATG2P53855 1592 aa1.79□□□□□ -2.12
MSN4YKL062W FIG2P25653 1609 aa1.78□□□□□ -2.13
MSN4YKL062W YBR016WP38216 128 aa1.76□□□□□ -2.13
MSN4YKL062W YBR230W-AQ3E762 66 aa1.76□□□□□ -2.13
MSN4YKL062W BUD3P25558 1636 aa1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms