RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W VMA9Q3E7B6 73 aa2.08□□□□□ -2.08
TFA1YKL028W IQG1Q12280 1495 aa2.07□□□□□ -2.08
TFA1YKL028W YKL018C-AQ3E7A7 99 aa2.06□□□□□ -2.08
TFA1YKL028W IML1P47170 1584 aa2.06□□□□□ -2.08
TFA1YKL028W TY1B-DR4Q07793 1604 aa2.06□□□□□ -2.08
TFA1YKL028W TY1B-ER2Q03619 1755 aa2.06□□□□□ -2.08
TFA1YKL028W TY1B-LR1Q12088 1755 aaKnown RBP2.06□□□□□ -2.08
TFA1YKL028W TY2B-LR1P0C2J3 1770 aa2.05□□□□□ -2.08
TFA1YKL028W TY2B-FP0CX63 1770 aa2.05□□□□□ -2.08
TFA1YKL028W TY2B-GR2P0CX64 1770 aa2.05□□□□□ -2.08
TFA1YKL028W TY2B-DR2Q03494 1770 aa2.05□□□□□ -2.08
TFA1YKL028W TY2B-OR1Q12113 1770 aa2.05□□□□□ -2.08
TFA1YKL028W TY2B-BQ12491 1770 aa2.05□□□□□ -2.08
TFA1YKL028W TY2B-OR2Q12501 1770 aa2.05□□□□□ -2.08
TFA1YKL028W YOL097W-AQ3E7Y9 61 aa2.05□□□□□ -2.08
TFA1YKL028W YOR032W-AQ8TGS1 66 aa2.05□□□□□ -2.08
TFA1YKL028W PDR12Q02785 1511 aa2.04□□□□□ -2.08
TFA1YKL028W AUA1P32450 94 aa2.04□□□□□ -2.08
TFA1YKL028W YSY6P38374 65 aa2.04□□□□□ -2.08
TFA1YKL028W YIL102C-AQ2V2P5 75 aa2.04□□□□□ -2.08
TFA1YKL028W TY2B-DR3Q07791 1770 aaKnown RBP2.04□□□□□ -2.08
TFA1YKL028W ATP17Q06405 101 aa2.03□□□□□ -2.08
TFA1YKL028W YIL134C-AQ45U18 67 aa2.03□□□□□ -2.08
TFA1YKL028W RPC10P40422 70 aa2.02□□□□□ -2.09
TFA1YKL028W RPL38P49167 78 aaKnown RBP2.02□□□□□ -2.09
TFA1YKL028W KOG1P38873 1557 aa2.02□□□□□ -2.09
TFA1YKL028W RPL43AP0CX25 92 aaKnown RBP2.01□□□□□ -2.09
TFA1YKL028W RPL43BP0CX26 92 aa2.01□□□□□ -2.09
TFA1YKL028W YDR246W-AQ3E763 66 aa2.01□□□□□ -2.09
TFA1YKL028W SDH6Q3E785 79 aa2.01□□□□□ -2.09
TFA1YKL028W RIM15P43565 1770 aa2.01□□□□□ -2.09
TFA1YKL028W RPL37AP49166 88 aaKnown RBP2□□□□□ -2.09
TFA1YKL028W YNL190WP53872 204 aa2□□□□□ -2.09
TFA1YKL028W DNF2Q12675 1612 aa1.99□□□□□ -2.09
TFA1YKL028W YPR108W-AQ3E7B3 70 aa1.98□□□□□ -2.09
TFA1YKL028W APC1P53886 1748 aa1.97□□□□□ -2.09
TFA1YKL028W ARO1P08566 1588 aaKnown RBP1.97□□□□□ -2.09
TFA1YKL028W YJR107C-AP0CT86 78 aa1.96□□□□□ -2.1
TFA1YKL028W PDR5P33302 1511 aaKnown RBP1.94□□□□□ -2.1
TFA1YKL028W RPO21P04050 1733 aaKnown RBP1.94□□□□□ -2.1
TFA1YKL028W YLR157W-EP0CF00 54 aa1.93□□□□□ -2.1
TFA1YKL028W SPO14P36126 1683 aa1.93□□□□□ -2.1
TFA1YKL028W YDR182W-AQ3E796 67 aa1.92□□□□□ -2.1
TFA1YKL028W YLR307C-AQ3E825 87 aa1.92□□□□□ -2.1
TFA1YKL028W HUB1Q6Q546 73 aa1.92□□□□□ -2.1
TFA1YKL028W TY3B-GQ99315 1547 aa1.92□□□□□ -2.1
TFA1YKL028W YBR032WP38223 100 aa1.91□□□□□ -2.1
TFA1YKL028W RPS30AP0CX33 63 aaKnown RBP1.91□□□□□ -2.1
TFA1YKL028W RPS30BP0CX34 63 aaKnown RBP1.91□□□□□ -2.1
TFA1YKL028W MMS1Q06211 1407 aa1.9□□□□□ -2.11
TFA1YKL028W YLR146W-AQ2V2P1 62 aa1.9□□□□□ -2.11
TFA1YKL028W BCK1Q01389 1478 aa1.89□□□□□ -2.11
TFA1YKL028W YCF1P39109 1515 aaKnown RBP1.89□□□□□ -2.11
TFA1YKL028W SNQ2P32568 1501 aaKnown RBP1.89□□□□□ -2.11
TFA1YKL028W HKR1P41809 1802 aa1.88□□□□□ -2.11
TFA1YKL028W YOL164W-AQ3E7A5 60 aa1.87□□□□□ -2.11
TFA1YKL028W SPT6P23615 1451 aaKnown RBP1.86□□□□□ -2.11
TFA1YKL028W CDC25P04821 1589 aa1.86□□□□□ -2.11
TFA1YKL028W VTH1P40438 1549 aa1.85□□□□□ -2.11
TFA1YKL028W VTH2P40890 1549 aa1.85□□□□□ -2.11
TFA1YKL028W EDC1P53080 175 aaPredicted RBP1.84□□□□□ -2.11
TFA1YKL028W RPL37BP51402 88 aaKnown RBP1.83□□□□□ -2.12
TFA1YKL028W YBL039W-BP0C268 59 aa1.83□□□□□ -2.12
TFA1YKL028W HAP1P0CE41 1502 aa1.83□□□□□ -2.12
TFA1YKL028W YKL023C-AQ2V2P3 75 aa1.83□□□□□ -2.12
TFA1YKL028W YBR200W-AQ3E755 54 aa1.81□□□□□ -2.12
TFA1YKL028W VMR1P38735 1592 aa1.8□□□□□ -2.12
TFA1YKL028W YOL166W-AQ8TGJ1 51 aa1.8□□□□□ -2.12
TFA1YKL028W SNF2P22082 1703 aa1.79□□□□□ -2.12
TFA1YKL028W YBT1P32386 1661 aa1.78□□□□□ -2.12
TFA1YKL028W YOR011W-AQ3E807 68 aa1.78□□□□□ -2.12
TFA1YKL028W IRC20Q06554 1556 aa1.77□□□□□ -2.13
TFA1YKL028W YOR394C-AQ8TGJ0 55 aa1.74□□□□□ -2.13
TFA1YKL028W YMR001C-AQ8TGS9 76 aa1.74□□□□□ -2.13
TFA1YKL028W PDR15Q04182 1529 aaKnown RBP1.73□□□□□ -2.13
TFA1YKL028W YFR009W-AP0C5M9 85 aa1.73□□□□□ -2.13
TFA1YKL028W YOR093CQ12275 1648 aa1.72□□□□□ -2.13
TFA1YKL028W OLI1P61829 76 aa1.72□□□□□ -2.13
TFA1YKL028W YOR192C-CQ3E736 78 aa1.72□□□□□ -2.13
TFA1YKL028W SSK2P53599 1579 aa1.72□□□□□ -2.13
TFA1YKL028W YLR157W-DP0CE99 70 aa1.71□□□□□ -2.14
TFA1YKL028W RPS27AP35997 82 aaKnown RBP1.71□□□□□ -2.14
TFA1YKL028W YBR016WP38216 128 aa1.71□□□□□ -2.14
TFA1YKL028W NUP188P52593 1655 aaKnown RBP1.7□□□□□ -2.14
TFA1YKL028W USO1P25386 1790 aa1.68□□□□□ -2.14
TFA1YKL028W ULS1Q08562 1619 aa1.68□□□□□ -2.14
TFA1YKL028W PEP1P32319 1579 aa1.67□□□□□ -2.14
TFA1YKL028W THO2P53552 1597 aaKnown RBP1.65□□□□□ -2.15
TFA1YKL028W HIR3P47171 1648 aa1.63□□□□□ -2.15
TFA1YKL028W NUM1Q00402 2748 aa1.61□□□□□ -2.15
TFA1YKL028W YGR025WP53216 100 aa1.61□□□□□ -2.15
TFA1YKL028W SEN1Q00416 2231 aaKnown RBP1.6□□□□□ -2.15
TFA1YKL028W YBL044WP38194 122 aa1.6□□□□□ -2.15
TFA1YKL028W PRP8P33334 2413 aaKnown RBP1.57□□□□□ -2.16
TFA1YKL028W RPS29BP41058 56 aaKnown RBP1.57□□□□□ -2.16
TFA1YKL028W SIP18P50263 79 aa1.56□□□□□ -2.16
TFA1YKL028W YBR230W-AQ3E762 66 aa1.56□□□□□ -2.16
TFA1YKL028W NUP192P47054 1683 aa1.53□□□□□ -2.16
TFA1YKL028W RKR1Q04781 1562 aa1.52□□□□□ -2.17
TFA1YKL028W TOM1Q03280 3268 aa1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms