RNA–Protein interactions for RNA: YJR132W

NMD5, Transcript of Karyopherin, yeastyeast

Gene NMD5, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD5YJR132W BRR2P32639 2163 aaKnown RBP4.73□□□□□ -1.65
NMD5YJR132W SHU1P38751 150 aa4.72□□□□□ -1.65
NMD5YJR132W YEL014CP39999 101 aa4.72□□□□□ -1.65
NMD5YJR132W YPR195CQ06594 109 aa4.7□□□□□ -1.66
NMD5YJR132W YJL027CP47063 138 aaPredicted RBP4.7□□□□□ -1.66
NMD5YJR132W YCL048W-AQ2V2Q2 79 aa4.7□□□□□ -1.66
NMD5YJR132W MRPS12P53732 153 aa4.69□□□□□ -1.66
NMD5YJR132W CCW12Q12127 133 aa4.69□□□□□ -1.66
NMD5YJR132W MGR2Q02889 113 aa4.69□□□□□ -1.66
NMD5YJR132W YBR219CP38317 127 aa4.68□□□□□ -1.66
NMD5YJR132W TOM7P53507 60 aa4.66□□□□□ -1.66
NMD5YJR132W YAL067W-AQ8TGK6 75 aa4.66□□□□□ -1.66
NMD5YJR132W CCW14O13547 238 aa4.65□□□□□ -1.66
NMD5YJR132W YDR210WQ03482 75 aa4.65□□□□□ -1.67
NMD5YJR132W COX8P04039 78 aa4.64□□□□□ -1.67
NMD5YJR132W HUB1Q6Q546 73 aa4.64□□□□□ -1.67
NMD5YJR132W ATP17Q06405 101 aa4.63□□□□□ -1.67
NMD5YJR132W HUG1Q6Q5K6 68 aa4.63□□□□□ -1.67
NMD5YJR132W RPL38P49167 78 aaKnown RBP4.63□□□□□ -1.67
NMD5YJR132W DAD4P69851 72 aa4.63□□□□□ -1.67
NMD5YJR132W YJR107C-AP0CT86 78 aa4.62□□□□□ -1.67
NMD5YJR132W YCR001WP25347 104 aa4.62□□□□□ -1.67
NMD5YJR132W TOS6P48560 102 aa4.61□□□□□ -1.67
NMD5YJR132W YSF3P0C074 85 aaPredicted RBP4.61□□□□□ -1.67
NMD5YJR132W AQY2P0CD90 149 aa4.6□□□□□ -1.67
NMD5YJR132W RPL33BP41056 107 aaKnown RBP4.59□□□□□ -1.67
NMD5YJR132W YGL014C-AP0C5N1 53 aa4.59□□□□□ -1.67
NMD5YJR132W LCL2Q08045 131 aa4.59□□□□□ -1.67
NMD5YJR132W YMR254CQ04838 102 aa4.59□□□□□ -1.68
NMD5YJR132W YOL085CQ99345 113 aa4.59□□□□□ -1.68
NMD5YJR132W YFL067WP43537 175 aa4.58□□□□□ -1.68
NMD5YJR132W YPR108W-AQ3E7B3 70 aa4.57□□□□□ -1.68
NMD5YJR132W YNL122CP53921 115 aaPredicted RBP4.57□□□□□ -1.68
NMD5YJR132W YIL102CP40488 101 aa4.57□□□□□ -1.68
NMD5YJR132W SGF11Q03067 99 aa4.55□□□□□ -1.68
NMD5YJR132W YLR157W-DP0CE99 70 aa4.55□□□□□ -1.68
NMD5YJR132W ATP18P81450 59 aa4.55□□□□□ -1.68
NMD5YJR132W YMR001C-AQ8TGS9 76 aa4.55□□□□□ -1.68
NMD5YJR132W YMR141CP40211 102 aa4.54□□□□□ -1.68
NMD5YJR132W YMR122W-AQ3E842 84 aa4.53□□□□□ -1.68
NMD5YJR132W YPR010C-AA5Z2X5 72 aa4.49□□□□□ -1.69
NMD5YJR132W YFR009W-AP0C5M9 85 aa4.49□□□□□ -1.69
NMD5YJR132W SDH6Q3E785 79 aa4.49□□□□□ -1.69
NMD5YJR132W YOR008C-AQ3E7B9 74 aa4.48□□□□□ -1.69
NMD5YJR132W SEN1Q00416 2231 aaKnown RBP4.47□□□□□ -1.69
NMD5YJR132W ACC1Q00955 2233 aaKnown RBP4.46□□□□□ -1.69
NMD5YJR132W YLR122CQ12312 125 aa4.46□□□□□ -1.7
NMD5YJR132W YER084WP40057 128 aa4.45□□□□□ -1.7
NMD5YJR132W YLR255CO13574 117 aa4.45□□□□□ -1.7
NMD5YJR132W RPL33AP05744 107 aaKnown RBP4.45□□□□□ -1.7
NMD5YJR132W YGL041C-BQ3E750 60 aa4.44□□□□□ -1.7
NMD5YJR132W YBR201C-AQ2V2Q3 67 aa4.44□□□□□ -1.7
NMD5YJR132W BLM10P43583 2143 aa4.44□□□□□ -1.7
NMD5YJR132W YOL013W-AP0C272 63 aaPredicted RBP4.41□□□□□ -1.7
NMD5YJR132W Q0032Q9ZZX7 96 aa4.41□□□□□ -1.7
NMD5YJR132W YJR146WP47174 117 aa4.4□□□□□ -1.7
NMD5YJR132W MVB12P42939 101 aa4.39□□□□□ -1.71
NMD5YJR132W VAM10Q08474 114 aa4.39□□□□□ -1.71
NMD5YJR132W YDL012CQ12489 107 aa4.38□□□□□ -1.71
NMD5YJR132W BEM2P39960 2167 aaKnown RBP4.37□□□□□ -1.71
NMD5YJR132W YJL144WP47009 104 aa4.37□□□□□ -1.71
NMD5YJR132W YGL258W-AQ3E740 77 aa4.37□□□□□ -1.71
NMD5YJR132W YBL039W-BP0C268 59 aa4.36□□□□□ -1.71
NMD5YJR132W YLR342W-AQ3E810 57 aa4.36□□□□□ -1.71
NMD5YJR132W YEL008WP40001 126 aa4.35□□□□□ -1.71
NMD5YJR132W YGR240C-AQ3E786 66 aa4.35□□□□□ -1.71
NMD5YJR132W YDR114CQ04597 100 aa4.35□□□□□ -1.71
NMD5YJR132W TAR1Q8TGM6 124 aa4.35□□□□□ -1.71
NMD5YJR132W YCL042WP25572 119 aa4.32□□□□□ -1.72
NMD5YJR132W YOL097W-AQ3E7Y9 61 aa4.32□□□□□ -1.72
NMD5YJR132W YOR072WQ08486 104 aa4.31□□□□□ -1.72
NMD5YJR132W FAB1P34756 2278 aa4.3□□□□□ -1.72
NMD5YJR132W SEC16P48415 2195 aaKnown RBP4.28□□□□□ -1.72
NMD5YJR132W YKR073CP36153 106 aa4.27□□□□□ -1.73
NMD5YJR132W YHR007C-AQ07074 71 aa4.27□□□□□ -1.73
NMD5YJR132W YBR200W-AQ3E755 54 aa4.27□□□□□ -1.73
NMD5YJR132W AUA1P32450 94 aa4.27□□□□□ -1.73
NMD5YJR132W YLL006W-AQ3E814 58 aa4.25□□□□□ -1.73
NMD5YJR132W YHR213W-BQ8TGK1 99 aa4.24□□□□□ -1.73
NMD5YJR132W YIL086CP40503 102 aa4.24□□□□□ -1.73
NMD5YJR132W YGR025WP53216 100 aa4.22□□□□□ -1.73
NMD5YJR132W YOR011W-AQ3E807 68 aa4.21□□□□□ -1.74
NMD5YJR132W LCL1Q02786 101 aa4.21□□□□□ -1.74
NMD5YJR132W YJR128WP47162 119 aa4.2□□□□□ -1.74
NMD5YJR132W YJL133C-AQ3E7A3 74 aa4.2□□□□□ -1.74
NMD5YJR132W COX7P10174 60 aa4.16□□□□□ -1.74
NMD5YJR132W RDS3Q06835 107 aaPredicted RBP4.15□□□□□ -1.75
NMD5YJR132W RPL43AP0CX25 92 aaKnown RBP4.14□□□□□ -1.75
NMD5YJR132W RPL43BP0CX26 92 aa4.14□□□□□ -1.75
NMD5YJR132W GIS2P53849 153 aaKnown RBP RIP-Chip data4.14□□□□□ -1.75not detected
NMD5YJR132W YOR394C-AQ8TGJ0 55 aa4.12□□□□□ -1.75
NMD5YJR132W POL2P21951 2222 aaKnown RBP4.11□□□□□ -1.75
NMD5YJR132W YAR064WP39563 99 aa4.11□□□□□ -1.75
NMD5YJR132W URA2P07259 2214 aaKnown RBP4.11□□□□□ -1.75
NMD5YJR132W SIP18P50263 79 aa4.1□□□□□ -1.75
NMD5YJR132W NCE101Q02820 53 aa4.07□□□□□ -1.76
NMD5YJR132W YDR524C-BQ3E6R4 66 aa4.07□□□□□ -1.76
NMD5YJR132W RPS27AP35997 82 aaKnown RBP4.05□□□□□ -1.76
NMD5YJR132W YBR230W-AQ3E762 66 aa4.04□□□□□ -1.76
NMD5YJR132W RPL29P05747 59 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 47 ms