RNA–Protein interactions for RNA: YFR023W

PES4, Transcript of Poly(A) binding protein, suppressor of DNA polymerase epsilon mutation, yeast

Gene PES4, Length 1,836 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PES4	YFR023W	LSM2	P38203	95 aa	Known RBP	0.47	□□□□□ -2.33
PES4	YFR023W	QCR9	P22289	66 aa		0.46	□□□□□ -2.34
PES4	YFR023W	YOL097W-A	Q3E7Y9	61 aa		0.46	□□□□□ -2.34
PES4	YFR023W	TY2B-LR1	P0C2J3	1770 aa		0.46	□□□□□ -2.34
PES4	YFR023W	TY2B-F	P0CX63	1770 aa		0.46	□□□□□ -2.34
PES4	YFR023W	TY2B-GR2	P0CX64	1770 aa		0.46	□□□□□ -2.34
PES4	YFR023W	TY2B-DR2	Q03494	1770 aa		0.46	□□□□□ -2.34
PES4	YFR023W	TY2B-OR1	Q12113	1770 aa		0.46	□□□□□ -2.34
PES4	YFR023W	TY2B-B	Q12491	1770 aa		0.46	□□□□□ -2.34
PES4	YFR023W	TY2B-OR2	Q12501	1770 aa		0.46	□□□□□ -2.34
PES4	YFR023W	YOR032W-A	Q8TGS1	66 aa		0.45	□□□□□ -2.34
PES4	YFR023W	YHR213W-A	Q8TGT4	77 aa		0.45	□□□□□ -2.34
PES4	YFR023W	TY2B-DR3	Q07791	1770 aa	Known RBP	0.44	□□□□□ -2.34
PES4	YFR023W	YBR032W	P38223	100 aa		0.44	□□□□□ -2.34
PES4	YFR023W	YKL018C-A	Q3E7A7	99 aa		0.44	□□□□□ -2.34
PES4	YFR023W	YGR035W-A	Q45U48	73 aa		0.44	□□□□□ -2.34
PES4	YFR023W	APC1	P53886	1748 aa		0.43	□□□□□ -2.34
PES4	YFR023W	ATX1	P38636	73 aa		0.43	□□□□□ -2.34
PES4	YFR023W	DOP1	Q03921	1698 aa		0.42	□□□□□ -2.34
PES4	YFR023W	EDC1	P53080	175 aa	Predicted RBP	0.42	□□□□□ -2.34
PES4	YFR023W	NUP159	P40477	1460 aa		0.41	□□□□□ -2.34
PES4	YFR023W	ATP17	Q06405	101 aa		0.4	□□□□□ -2.35
PES4	YFR023W	UFD4	P33202	1483 aa		0.38	□□□□□ -2.35
PES4	YFR023W	YCR108C	Q3E819	63 aa		0.38	□□□□□ -2.35
PES4	YFR023W	YBL044W	P38194	122 aa		0.37	□□□□□ -2.35
PES4	YFR023W	PAU7	P39545	55 aa		0.37	□□□□□ -2.35
PES4	YFR023W	YLR146W-A	Q2V2P1	62 aa		0.37	□□□□□ -2.35
PES4	YFR023W	ERI1	P62651	68 aa	Known RBP	0.36	□□□□□ -2.35
PES4	YFR023W	PAI3	P01094	68 aa		0.36	□□□□□ -2.35
PES4	YFR023W	SMC4	Q12267	1418 aa		0.35	□□□□□ -2.35
PES4	YFR023W	SSS1	P35179	80 aa		0.34	□□□□□ -2.35
PES4	YFR023W	RPS27A	P35997	82 aa	Known RBP	0.34	□□□□□ -2.35
PES4	YFR023W	YGR025W	P53216	100 aa		0.34	□□□□□ -2.35
PES4	YFR023W	FKS3	Q04952	1785 aa		0.33	□□□□□ -2.36
PES4	YFR023W	ARO1	P08566	1588 aa	Known RBP	0.33	□□□□□ -2.36
PES4	YFR023W	YBR200W-A	Q3E755	54 aa		0.32	□□□□□ -2.36
PES4	YFR023W	YFL041W-A	Q3E817	63 aa		0.32	□□□□□ -2.36
PES4	YFR023W	DNF2	Q12675	1612 aa		0.32	□□□□□ -2.36
PES4	YFR023W	IRC20	Q06554	1556 aa		0.32	□□□□□ -2.36
PES4	YFR023W	TCB3	Q03640	1545 aa	Known RBP	0.32	□□□□□ -2.36
PES4	YFR023W	MMS1	Q06211	1407 aa		0.31	□□□□□ -2.36
PES4	YFR023W	DNF1	P32660	1571 aa		0.31	□□□□□ -2.36
PES4	YFR023W	YBR056W-A	I2HB52	66 aa		0.31	□□□□□ -2.36
PES4	YFR023W	YBL039W-B	P0C268	59 aa		0.31	□□□□□ -2.36
PES4	YFR023W	SPI1	P40092	148 aa		0.31	□□□□□ -2.36
PES4	YFR023W	UTP20	P35194	2493 aa	Known RBP	0.31	□□□□□ -2.36
PES4	YFR023W	SCC2	Q04002	1493 aa		0.3	□□□□□ -2.36
PES4	YFR023W	YDR246W-A	Q3E763	66 aa		0.3	□□□□□ -2.36
PES4	YFR023W	KOG1	P38873	1557 aa		0.29	□□□□□ -2.36
PES4	YFR023W	IML1	P47170	1584 aa		0.29	□□□□□ -2.36
PES4	YFR023W	YOR394C-A	Q8TGJ0	55 aa		0.29	□□□□□ -2.36
PES4	YFR023W	OLI1	P61829	76 aa		0.28	□□□□□ -2.36
PES4	YFR023W	TY3B-G	Q99315	1547 aa		0.27	□□□□□ -2.37
PES4	YFR023W	YOR011W-A	Q3E807	68 aa		0.27	□□□□□ -2.37
PES4	YFR023W	SIP18	P50263	79 aa		0.26	□□□□□ -2.37
PES4	YFR023W	RRP5	Q05022	1729 aa	Known RBP	0.26	□□□□□ -2.37
PES4	YFR023W	RPO21	P04050	1733 aa	Known RBP	0.25	□□□□□ -2.37
PES4	YFR023W	RPS30A	P0CX33	63 aa	Known RBP	0.25	□□□□□ -2.37
PES4	YFR023W	RPS30B	P0CX34	63 aa	Known RBP	0.25	□□□□□ -2.37
PES4	YFR023W	HUB1	Q6Q546	73 aa		0.25	□□□□□ -2.37
PES4	YFR023W	IQG1	Q12280	1495 aa		0.25	□□□□□ -2.37
PES4	YFR023W	YSY6	P38374	65 aa		0.24	□□□□□ -2.37
PES4	YFR023W	HAP1	P0CE41	1502 aa		0.24	□□□□□ -2.37
PES4	YFR023W	VPS15	P22219	1454 aa		0.24	□□□□□ -2.37
PES4	YFR023W	YDR182W-A	Q3E796	67 aa		0.22	□□□□□ -2.37
PES4	YFR023W	MYO4	P32492	1471 aa		0.21	□□□□□ -2.38
PES4	YFR023W	YOL131W	Q08270	108 aa		0.21	□□□□□ -2.38
PES4	YFR023W	VTH1	P40438	1549 aa		0.2	□□□□□ -2.38
PES4	YFR023W	VTH2	P40890	1549 aa		0.2	□□□□□ -2.38
PES4	YFR023W	YIL102C-A	Q2V2P5	75 aa		0.2	□□□□□ -2.38
PES4	YFR023W	RPO31	P04051	1460 aa		0.2	□□□□□ -2.38
PES4	YFR023W	SPO14	P36126	1683 aa		0.19	□□□□□ -2.38
PES4	YFR023W	YOR008C-A	Q3E7B9	74 aa		0.17	□□□□□ -2.38
PES4	YFR023W	TOR1	P35169	2470 aa		0.17	□□□□□ -2.38
PES4	YFR023W	YMR001C-A	Q8TGS9	76 aa		0.17	□□□□□ -2.38
PES4	YFR023W	RPS27B	P38711	82 aa		0.16	□□□□□ -2.38
PES4	YFR023W	TOS6	P48560	102 aa		0.16	□□□□□ -2.38
PES4	YFR023W	YOL166W-A	Q8TGJ1	51 aa		0.16	□□□□□ -2.38
PES4	YFR023W	VMR1	P38735	1592 aa		0.15	□□□□□ -2.39
PES4	YFR023W	YLR157W-D	P0CE99	70 aa		0.14	□□□□□ -2.39
PES4	YFR023W	PDR15	Q04182	1529 aa	Known RBP	0.13	□□□□□ -2.39
PES4	YFR023W	YFR010W-A	P0C5N0	62 aa		0.13	□□□□□ -2.39
PES4	YFR023W	RPS29A	P41057	56 aa	Known RBP	0.11	□□□□□ -2.39
PES4	YFR023W	BCK1	Q01389	1478 aa		0.1	□□□□□ -2.39
PES4	YFR023W	VMA9	Q3E7B6	73 aa		0.09	□□□□□ -2.39
PES4	YFR023W	PDR12	Q02785	1511 aa		0.07	□□□□□ -2.4
PES4	YFR023W	YOR192C-C	Q3E736	78 aa		0.07	□□□□□ -2.4
PES4	YFR023W	YBR230W-A	Q3E762	66 aa		0.07	□□□□□ -2.4
PES4	YFR023W	YGR146C-A	Q8TGT9	53 aa		0.06	□□□□□ -2.4
PES4	YFR023W	YLL006W-A	Q3E814	58 aa		0.03	□□□□□ -2.4
PES4	YFR023W	YBT1	P32386	1661 aa		0.03	□□□□□ -2.41
PES4	YFR023W	TY1B-DR4	Q07793	1604 aa		0.02	□□□□□ -2.41
PES4	YFR023W	CDC25	P04821	1589 aa		-0.02	□□□□□ -2.41
PES4	YFR023W	YGL258W-A	Q3E740	77 aa		-0.04	□□□□□ -2.42
PES4	YFR023W	PDR5	P33302	1511 aa	Known RBP	-0.05	□□□□□ -2.42
PES4	YFR023W	YKL023C-A	Q2V2P3	75 aa		-0.05	□□□□□ -2.42
PES4	YFR023W	SNQ2	P32568	1501 aa	Known RBP	-0.05	□□□□□ -2.42
PES4	YFR023W	YOR093C	Q12275	1648 aa		-0.05	□□□□□ -2.42
PES4	YFR023W	YDR524C-B	Q3E6R4	66 aa		-0.06	□□□□□ -2.42
PES4	YFR023W	YCF1	P39109	1515 aa	Known RBP	-0.06	□□□□□ -2.42

Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms