RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM4, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM4YER112W YOR105WQ08504 108 aa-0.85□□□□□ -2.55
LSM4YER112W YMR175W-AQ3E766 64 aa-0.85□□□□□ -2.55
LSM4YER112W TOR1P35169 2470 aa-0.89□□□□□ -2.55
LSM4YER112W YKL065W-AQ2V2P2 73 aa-0.92□□□□□ -2.56
LSM4YER112W YDR182W-AQ3E796 67 aa-0.93□□□□□ -2.56
LSM4YER112W YKL018C-AQ3E7A7 99 aa-0.95□□□□□ -2.56
LSM4YER112W SMC4Q12267 1418 aa-0.98□□□□□ -2.57
LSM4YER112W YOR008C-AQ3E7B9 74 aa-0.98□□□□□ -2.57
LSM4YER112W YDL022C-AP0C5L6 82 aa-1□□□□□ -2.57
LSM4YER112W POC4Q12245 148 aaPredicted RBP-1□□□□□ -2.57
LSM4YER112W YOR314WQ12506 109 aa-1□□□□□ -2.57
LSM4YER112W TY1B-NL2Q99337 1749 aaKnown RBP-1.01□□□□□ -2.57
LSM4YER112W LSM2P38203 95 aaKnown RBP-1.01□□□□□ -2.57
LSM4YER112W OLI1P61829 76 aa-1.01□□□□□ -2.57
LSM4YER112W VTH1P40438 1549 aa-1.01□□□□□ -2.57
LSM4YER112W VTH2P40890 1549 aa-1.01□□□□□ -2.57
LSM4YER112W ESC1Q03661 1658 aaKnown RBP-1.01□□□□□ -2.57
LSM4YER112W SIN3P22579 1536 aa-1.02□□□□□ -2.57
LSM4YER112W IRC20Q06554 1556 aa-1.03□□□□□ -2.57
LSM4YER112W MLP1Q02455 1875 aaKnown RBP-1.03□□□□□ -2.57
LSM4YER112W LTE1P07866 1435 aa-1.04□□□□□ -2.58
LSM4YER112W RPS27AP35997 82 aaKnown RBP-1.04□□□□□ -2.58
LSM4YER112W SIP18P50263 79 aa-1.04□□□□□ -2.58
LSM4YER112W MMS22Q06164 1454 aa-1.05□□□□□ -2.58
LSM4YER112W YPR145C-AQ2V2P0 78 aa-1.05□□□□□ -2.58
LSM4YER112W SPO14P36126 1683 aa-1.05□□□□□ -2.58
LSM4YER112W YLR146W-AQ2V2P1 62 aa-1.06□□□□□ -2.58
LSM4YER112W YGL194C-AQ2V2P6 80 aa-1.06□□□□□ -2.58
LSM4YER112W KOG1P38873 1557 aa-1.06□□□□□ -2.58
LSM4YER112W ATP17Q06405 101 aa-1.08□□□□□ -2.58
LSM4YER112W YSP2Q06681 1438 aa-1.08□□□□□ -2.58
LSM4YER112W CWP2P43497 92 aa-1.09□□□□□ -2.58
LSM4YER112W QCR9P22289 66 aa-1.13□□□□□ -2.59
LSM4YER112W TOS6P48560 102 aa-1.14□□□□□ -2.59
LSM4YER112W ESP1Q03018 1630 aa-1.15□□□□□ -2.59
LSM4YER112W YOR394C-AQ8TGJ0 55 aa-1.15□□□□□ -2.59
LSM4YER112W YBR200W-AQ3E755 54 aa-1.16□□□□□ -2.6
LSM4YER112W YGR121W-AQ3E816 71 aa-1.16□□□□□ -2.6
LSM4YER112W RPO21P04050 1733 aaKnown RBP-1.17□□□□□ -2.6
LSM4YER112W SWM2P40342 146 aa-1.17□□□□□ -2.6
LSM4YER112W YOR011W-AQ3E807 68 aa-1.19□□□□□ -2.6
LSM4YER112W TY3B-GQ99315 1547 aa-1.21□□□□□ -2.6
LSM4YER112W YGR035W-AQ45U48 73 aa-1.23□□□□□ -2.61
LSM4YER112W YBL039W-BP0C268 59 aa-1.25□□□□□ -2.61
LSM4YER112W YOR032W-AQ8TGS1 66 aa-1.26□□□□□ -2.61
LSM4YER112W PAU7P39545 55 aa-1.3□□□□□ -2.62
LSM4YER112W HAP1P0CE41 1502 aa-1.35□□□□□ -2.63
LSM4YER112W FMP27Q06179 2628 aa-1.36□□□□□ -2.63
LSM4YER112W SSS1P35179 80 aa-1.38□□□□□ -2.63
LSM4YER112W TIM12P32830 109 aa-1.4□□□□□ -2.63
LSM4YER112W HUB1Q6Q546 73 aa-1.41□□□□□ -2.64
LSM4YER112W FKS3Q04952 1785 aa-1.42□□□□□ -2.64
LSM4YER112W YDR119W-AQ2V2P9 66 aa-1.43□□□□□ -2.64
LSM4YER112W ARO1P08566 1588 aaKnown RBP-1.45□□□□□ -2.64
LSM4YER112W COA2Q3E823 68 aa-1.45□□□□□ -2.64
LSM4YER112W RPS27BP38711 82 aa-1.48□□□□□ -2.65
LSM4YER112W YHR050W-AQ05451 56 aa-1.49□□□□□ -2.65
LSM4YER112W YDR524C-BQ3E6R4 66 aa-1.49□□□□□ -2.65
LSM4YER112W YPR117WQ06116 2489 aa-1.49□□□□□ -2.65
LSM4YER112W TOR2P32600 2474 aaKnown RBP-1.52□□□□□ -2.65
LSM4YER112W SPI1P40092 148 aa-1.52□□□□□ -2.65
LSM4YER112W ERI1P62651 68 aaKnown RBP-1.55□□□□□ -2.66
LSM4YER112W YLL006W-AQ3E814 58 aa-1.55□□□□□ -2.66
LSM4YER112W IML1P47170 1584 aa-1.55□□□□□ -2.66
LSM4YER112W SKI3P17883 1432 aaKnown RBP-1.57□□□□□ -2.66
LSM4YER112W YBR230W-AQ3E762 66 aa-1.57□□□□□ -2.66
LSM4YER112W UFD4P33202 1483 aa-1.57□□□□□ -2.66
LSM4YER112W YGR146C-AQ8TGT9 53 aa-1.58□□□□□ -2.66
LSM4YER112W DNF2Q12675 1612 aa-1.58□□□□□ -2.66
LSM4YER112W DOP1Q03921 1698 aa-1.6□□□□□ -2.67
LSM4YER112W YGL258W-AQ3E740 77 aa-1.61□□□□□ -2.67
LSM4YER112W MEC1P38111 2368 aa-1.61□□□□□ -2.67
LSM4YER112W YHR213W-AQ8TGT4 77 aa-1.65□□□□□ -2.67
LSM4YER112W VPS15P22219 1454 aa-1.65□□□□□ -2.67
LSM4YER112W RRP5Q05022 1729 aaKnown RBP-1.66□□□□□ -2.67
LSM4YER112W IQG1Q12280 1495 aa-1.67□□□□□ -2.68
LSM4YER112W TEL1P38110 2787 aa-1.67□□□□□ -2.68
LSM4YER112W RPS30AP0CX33 63 aaKnown RBP-1.68□□□□□ -2.68
LSM4YER112W RPS30BP0CX34 63 aaKnown RBP-1.68□□□□□ -2.68
LSM4YER112W YFL041W-AQ3E817 63 aa-1.71□□□□□ -2.68
LSM4YER112W NUP159P40477 1460 aa-1.74□□□□□ -2.69
LSM4YER112W PDR12Q02785 1511 aa-1.74□□□□□ -2.69
LSM4YER112W BCK1Q01389 1478 aa-1.75□□□□□ -2.69
LSM4YER112W YOR072W-BQ3E832 53 aa-1.75□□□□□ -2.69
LSM4YER112W RPO31P04051 1460 aa-1.76□□□□□ -2.69
LSM4YER112W YLR157W-DP0CE99 70 aa-1.79□□□□□ -2.7
LSM4YER112W YSY6P38374 65 aa-1.79□□□□□ -2.7
LSM4YER112W YOL131WQ08270 108 aa-1.79□□□□□ -2.7
LSM4YER112W VMR1P38735 1592 aa-1.82□□□□□ -2.7
LSM4YER112W PAI3P01094 68 aa-1.86□□□□□ -2.71
LSM4YER112W PDR15Q04182 1529 aaKnown RBP-1.87□□□□□ -2.71
LSM4YER112W DYN1P36022 4092 aa-1.87□□□□□ -2.71
LSM4YER112W DNF1P32660 1571 aa-1.88□□□□□ -2.71
LSM4YER112W SCC2Q04002 1493 aa-1.88□□□□□ -2.71
LSM4YER112W MDN1Q12019 4910 aaKnown RBP-1.9□□□□□ -2.71
LSM4YER112W YOL166W-AQ8TGJ1 51 aa-1.91□□□□□ -2.72
LSM4YER112W TY1B-DR4Q07793 1604 aa-1.97□□□□□ -2.72
LSM4YER112W YIL102C-AQ2V2P5 75 aa-1.98□□□□□ -2.73
LSM4YER112W SNQ2P32568 1501 aaKnown RBP-1.99□□□□□ -2.73
LSM4YER112W GCN1P33892 2672 aaKnown RBP-2.01□□□□□ -2.73
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms