RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 OR10T2Q8NGX3 314 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 ACTRT1Q8TDG2 376 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 MYLPFQ96A32 169 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 PCED1BQ96HM7 432 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 CARD9Q9H257 536 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 KRT82Q9NSB4 513 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 MARCH5Q9NX47 278 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 ADAM28Q9UKQ2 775 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 TTC3P53804 2025 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 SYN3O14994 580 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 PAPSS1O43252 624 aaPredicted RBP13.76□□□□□ -0.21
PHGDH-221ENST00000641573 AP1G2O75843 785 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 DGKIO75912 1065 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 BEST1O76090 585 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 OAZ2O95190 189 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 LCP1P13796 627 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 SSR1P43307 286 aaKnown RBP13.76□□□□□ -0.21
PHGDH-221ENST00000641573 CDR1P51861 262 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 PTPN5P54829 565 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 BCAR1P56945 870 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 RWDD2BP57060 319 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 TAS2R40P59535 323 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 TUBB4BP68371 445 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 ZP2Q05996 745 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 ITIH3Q06033 890 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 C2orf54Q08AI8 447 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 ZNF211Q13398 564 aaPredicted RBP13.76□□□□□ -0.21
PHGDH-221ENST00000641573 FAM117BQ6P1L5 589 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 CC2D1AQ6P1N0 951 aaPredicted RBP13.76□□□□□ -0.21
PHGDH-221ENST00000641573 OLFML1Q6UWY5 402 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 CLEC20AQ6ZU45 233 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 PIGZQ86VD9 579 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 ZDHHC17Q8IUH5 632 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 SCUBE3Q8IX30 993 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 EMC1Q8N766 993 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 NIPA2Q8N8Q9 360 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 NOA1Q8NC60 698 aaKnown RBP13.76□□□□□ -0.21
PHGDH-221ENST00000641573 SPATA4Q8NEY3 305 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 FNIP1Q8TF40 1166 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 TOP1MTQ969P6 601 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 MRPL38Q96DV4 380 aaKnown RBP13.76□□□□□ -0.21
PHGDH-221ENST00000641573 TMEM209Q96SK2 561 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 PKMYT1Q99640 499 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 TMLHEQ9NVH6 421 aa13.76□□□□□ -0.21
PHGDH-221ENST00000641573 F8VP50 259 aa13.75□□□□□ -0.21
PHGDH-221ENST00000641573 PGRMC1O00264 195 aaKnown RBP13.75□□□□□ -0.21
PHGDH-221ENST00000641573 DYNC1I1O14576 645 aa13.75□□□□□ -0.21
PHGDH-221ENST00000641573 PSTPIP1O43586 416 aa13.75□□□□□ -0.21
PHGDH-221ENST00000641573 GPD1P21695 349 aa13.75□□□□□ -0.21
PHGDH-221ENST00000641573 MAP3K7CLP57077 242 aa13.75□□□□□ -0.21
PHGDH-221ENST00000641573 FOXK2Q01167 660 aa13.75□□□□□ -0.21
PHGDH-221ENST00000641573 MAPRE1Q15691 268 aaKnown RBP13.75□□□□□ -0.21
PHGDH-221ENST00000641573 ELF2Q15723 593 aa13.75□□□□□ -0.21
PHGDH-221ENST00000641573 VARS2Q5ST30 1063 aaKnown RBP13.75□□□□□ -0.21
PHGDH-221ENST00000641573 FAM171A1Q5VUB5 890 aa13.75□□□□□ -0.21
PHGDH-221ENST00000641573 DAB2IPQ5VWQ8 1189 aa13.75□□□□□ -0.21
PHGDH-221ENST00000641573 FUT10Q6P4F1 479 aa13.75□□□□□ -0.21
PHGDH-221ENST00000641573 LRRTM3Q86VH5 581 aa13.75□□□□□ -0.21
PHGDH-221ENST00000641573 ADHFE1Q8IWW8 467 aa13.75□□□□□ -0.21
PHGDH-221ENST00000641573 RHOT1Q8IXI2 618 aa13.75□□□□□ -0.21
PHGDH-221ENST00000641573 KCTD13Q8WZ19 329 aa13.75□□□□□ -0.21
PHGDH-221ENST00000641573 SMARCD1Q96GM5 515 aa13.75□□□□□ -0.21
PHGDH-221ENST00000641573 PIWIL1Q96J94 861 aaKnown RBP13.75□□□□□ -0.21
PHGDH-221ENST00000641573 PRRX2Q99811 253 aa13.75□□□□□ -0.21
PHGDH-221ENST00000641573 SMOQ99835 787 aa13.75□□□□□ -0.21
PHGDH-221ENST00000641573 GPR62Q9BZJ7 368 aa13.75□□□□□ -0.21
PHGDH-221ENST00000641573 LRRC4Q9HBW1 653 aa13.75□□□□□ -0.21
PHGDH-221ENST00000641573 TMEM59LQ9UK28 342 aa13.75□□□□□ -0.21
PHGDH-221ENST00000641573 TTC7AQ9ULT0 858 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-221ENST00000641573 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.75□□□□□ -0.21
PHGDH-221ENST00000641573 ZNF318Q5VUA4 2279 aa13.75□□□□□ -0.21
PHGDH-221ENST00000641573 SF3B1O75533 1304 aaKnown RBP eCLIP13.74□□□□□ -0.218e-6■■■■■ 107
PHGDH-221ENST00000641573 NT5C1B-RDH14C9J2C7 533 aa13.74□□□□□ -0.21
PHGDH-221ENST00000641573 GRAP2O75791 330 aa13.74□□□□□ -0.21
PHGDH-221ENST00000641573 PYGMP11217 842 aa13.74□□□□□ -0.21
PHGDH-221ENST00000641573 FGFR3P22607 806 aa13.74□□□□□ -0.21
PHGDH-221ENST00000641573 SCNN1AP37088 669 aa13.74□□□□□ -0.21
PHGDH-221ENST00000641573 PBX3P40426 434 aa13.74□□□□□ -0.21
PHGDH-221ENST00000641573 CACNA2D1P54289 1103 aa13.74□□□□□ -0.21
PHGDH-221ENST00000641573 ELAVL2Q12926 359 aaKnown RBP13.74□□□□□ -0.21
PHGDH-221ENST00000641573 TAF5Q15542 800 aa13.74□□□□□ -0.21
PHGDH-221ENST00000641573 SEL1L2Q5TEA6 688 aa13.74□□□□□ -0.21
PHGDH-221ENST00000641573 AADACL2Q6P093 401 aa13.74□□□□□ -0.21
PHGDH-221ENST00000641573 DCP1BQ8IZD4 617 aaKnown RBP13.74□□□□□ -0.21
PHGDH-221ENST00000641573 MMGT1Q8N4V1 131 aa13.74□□□□□ -0.21
PHGDH-221ENST00000641573 ZMIZ2Q8NF64 920 aa13.74□□□□□ -0.21
PHGDH-221ENST00000641573 CLEC4CQ8WTT0 213 aa13.74□□□□□ -0.21
PHGDH-221ENST00000641573 RXFP2Q8WXD0 754 aa13.74□□□□□ -0.21
PHGDH-221ENST00000641573 PABPC5Q96DU9 382 aaKnown RBP13.74□□□□□ -0.21
PHGDH-221ENST00000641573 PHOX2BQ99453 314 aa13.74□□□□□ -0.21
PHGDH-221ENST00000641573 RHOBTB2Q9BYZ6 727 aa13.74□□□□□ -0.21
PHGDH-221ENST00000641573 UBXN6Q9BZV1 441 aa13.74□□□□□ -0.21
PHGDH-221ENST00000641573 ZCWPW1Q9H0M4 648 aa13.74□□□□□ -0.21
PHGDH-221ENST00000641573 CWH43Q9H720 699 aa13.74□□□□□ -0.21
PHGDH-221ENST00000641573 INSL6Q9Y581 213 aa13.74□□□□□ -0.21
PHGDH-221ENST00000641573 COL4A6Q14031 1691 aa13.74□□□□□ -0.21
PHGDH-221ENST00000641573 C2CD4BA6NLJ0 364 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 DPYSL4O14531 572 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 FGGP02679 453 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 OR4Q2P0C623 313 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms