RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 FOXD4L4Q8WXT5 416 aaPredicted RBP10.39□□□□□ -0.75
PHGDH-212ENST00000641247 BICD1Q96G01 975 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 C8orf76Q96K31 380 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 TRIM9Q9C026 710 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 GAREM1Q9H706 876 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 TM7SF3Q9NS93 570 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 CPQQ9Y646 472 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 STK24Q9Y6E0 443 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 ACACAQ13085 2346 aa10.39□□□□□ -0.75
PHGDH-212ENST00000641247 HELZP42694 1942 aaKnown RBP10.39□□□□□ -0.75
PHGDH-212ENST00000641247 ZNF840PA6NDX5 716 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 WASH3PC4AMC7 463 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 J3QKU1 62 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 PLK4O00444 970 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 DYNC1I1O14576 645 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 TRIM66O15016 1216 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 TULP3O75386 442 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 OLFM2O95897 454 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 ADH5P11766 374 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 LIG4P49917 911 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 HLA-BQ31612 363 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 TTC38Q5R3I4 469 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 CRELD2Q6UXH1 353 aaPredicted RBP10.38□□□□□ -0.75
PHGDH-212ENST00000641247 CD302Q8IX05 232 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 ZCCHC9Q8N567 271 aaKnown RBP10.38□□□□□ -0.75
PHGDH-212ENST00000641247 ZSWIM2Q8NEG5 633 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 FBXO18Q8NFZ0 1043 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 CXorf38Q8TB03 319 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 IPO4Q8TEX9 1081 aaKnown RBP10.38□□□□□ -0.75
PHGDH-212ENST00000641247 DNASE2BQ8WZ79 361 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 KCNN1Q92952 543 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 MRGPRX1Q96LB2 322 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 TSPAN18Q96SJ8 248 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 PLIN2Q99541 437 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 ACBD6Q9BR61 282 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 FAM124BQ9H5Z6 455 aaPredicted RBP10.38□□□□□ -0.75
PHGDH-212ENST00000641247 ABCB6Q9NP58 842 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 CFAP97Q9P2B7 532 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.38□□□□□ -0.75
PHGDH-212ENST00000641247 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.38□□□□□ -0.75
PHGDH-212ENST00000641247 TENM4Q6N022 2769 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 ZNF462Q96JM2 2506 aa10.38□□□□□ -0.75
PHGDH-212ENST00000641247 KCNJ18B7U540 433 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 PRRT4C9JH25 899 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 KCNK3O14649 394 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 OBSL1O75147 1896 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 ZNF217O75362 1048 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 PIGRP01833 764 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 LMO2P25791 158 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 TOB1P50616 345 aaPredicted RBP10.37□□□□□ -0.75
PHGDH-212ENST00000641247 SMTNP53814 917 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 SLC12A3P55017 1021 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 TSPY1Q01534 308 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 CFHR1Q03591 330 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 PTPRNQ16849 979 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 CFAP221Q4G0U5 840 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 C10orf76Q5T2E6 689 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 FAM171BQ6P995 826 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 DHRS13Q6UX07 377 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 TMEM25Q86YD3 366 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 PDCD7Q8N8D1 485 aaKnown RBP10.37□□□□□ -0.75
PHGDH-212ENST00000641247 SYT2Q8N9I0 419 aaPredicted RBP10.37□□□□□ -0.75
PHGDH-212ENST00000641247 C1orf216Q8TAB5 229 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 P2RY11Q96G91 374 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 ZFRQ96KR1 1074 aaKnown RBP10.37□□□□□ -0.75
PHGDH-212ENST00000641247 FCRL3Q96P31 734 aaPredicted RBP10.37□□□□□ -0.75
PHGDH-212ENST00000641247 FIZ1Q96SL8 496 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 MSTO1Q9BUK6 570 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 SEMA4CQ9C0C4 833 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 ZSCAN16Q9H4T2 348 aaPredicted RBP10.37□□□□□ -0.75
PHGDH-212ENST00000641247 ASB7Q9H672 318 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 WSB2Q9NYS7 404 aaPredicted RBP10.37□□□□□ -0.75
PHGDH-212ENST00000641247 DERAQ9Y315 318 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 STARD13Q9Y3M8 1113 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 C2CD2Q9Y426 696 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 PI4KAP42356 2102 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 PTPRBP23467 1997 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 DENND4CQ5VZ89 1909 aa10.37□□□□□ -0.75
PHGDH-212ENST00000641247 CITO14578 2027 aa10.36□□□□□ -0.75
PHGDH-212ENST00000641247 A0A1B0GTW7 788 aa10.36□□□□□ -0.75
PHGDH-212ENST00000641247 GABRDO14764 452 aa10.36□□□□□ -0.75
PHGDH-212ENST00000641247 HNRNPDLO14979 420 aaKnown RBP10.36□□□□□ -0.75
PHGDH-212ENST00000641247 OAS1P00973 400 aaKnown RBP10.36□□□□□ -0.75
PHGDH-212ENST00000641247 ZNF883P0CG24 379 aa10.36□□□□□ -0.75
PHGDH-212ENST00000641247 NTSR1P30989 418 aa10.36□□□□□ -0.75
PHGDH-212ENST00000641247 TRIM29Q14134 588 aa10.36□□□□□ -0.75
PHGDH-212ENST00000641247 ZRSR1Q15695 479 aaKnown RBP10.36□□□□□ -0.75
PHGDH-212ENST00000641247 CCDC157Q569K6 752 aa10.36□□□□□ -0.75
PHGDH-212ENST00000641247 SPATA2LQ8IUW3 424 aaPredicted RBP10.36□□□□□ -0.75
PHGDH-212ENST00000641247 FSIP1Q8NA03 581 aa10.36□□□□□ -0.75
PHGDH-212ENST00000641247 TERB1Q8NA31 727 aa10.36□□□□□ -0.75
PHGDH-212ENST00000641247 LSM14AQ8ND56 463 aaKnown RBP10.36□□□□□ -0.75
PHGDH-212ENST00000641247 GABRG3Q99928 467 aa10.36□□□□□ -0.75
PHGDH-212ENST00000641247 GTPBP4Q9BZE4 634 aaKnown RBP10.36□□□□□ -0.75
PHGDH-212ENST00000641247 ZDHHC5Q9C0B5 715 aa10.36□□□□□ -0.75
PHGDH-212ENST00000641247 MIR1-1HGQ9H1L0 117 aa10.36□□□□□ -0.75
PHGDH-212ENST00000641247 CRTAC1Q9NQ79 661 aa10.36□□□□□ -0.75
PHGDH-212ENST00000641247 TMEM30AQ9NV96 361 aa10.36□□□□□ -0.75
PHGDH-212ENST00000641247 GMIPQ9P107 970 aa10.36□□□□□ -0.75
PHGDH-212ENST00000641247 DNMT3LQ9UJW3 386 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms