RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 TRIM49CP0CI26 452 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 MBL2P11226 248 aaPredicted RBP14.76□□□□□ -0.05
LINC00339-211ENST00000641009 NR2F2P24468 414 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 OPRD1P41143 372 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 ASPAP45381 313 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 C12orf29Q8N999 325 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 FAM49BQ9NUQ9 324 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 CFAP97Q9P2B7 532 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 ATP6V1DQ9Y5K8 247 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.76□□□□□ -0.05
LINC00339-211ENST00000641009 ANTXRLA6NF34 631 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 COCHO43405 550 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 LRP3O75074 770 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 ZNF202O95125 648 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 KIF20AO95235 890 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 GCLMP48507 274 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 NFIL3Q16649 462 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 ADGRG2Q8IZP9 1017 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 PDZD8Q8NEN9 1154 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 ZMIZ2Q8NF64 920 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 SLC2A14Q8TDB8 520 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 GAB3Q8WWW8 586 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 OVCA2Q8WZ82 227 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 TAF4BQ92750 862 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 ZFRQ96KR1 1074 aaKnown RBP14.76□□□□□ -0.05
LINC00339-211ENST00000641009 SMOQ99835 787 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 CCSER2Q9H7U1 834 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 MMRN2Q9H8L6 949 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 SEMA4GQ9NTN9 838 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 GMIPQ9P107 970 aa14.76□□□□□ -0.05
LINC00339-211ENST00000641009 CDV3Q9UKY7 258 aaKnown RBP14.76□□□□□ -0.05
LINC00339-211ENST00000641009 CEP192Q8TEP8 1941 aa14.75□□□□□ -0.05
LINC00339-211ENST00000641009 CCDC163A0A0D9SF12 145 aa14.75□□□□□ -0.05
LINC00339-211ENST00000641009 PRR5-ARHGAP8B1AHC4 643 aa14.75□□□□□ -0.05
LINC00339-211ENST00000641009 MAPK13O15264 365 aa14.75□□□□□ -0.05
LINC00339-211ENST00000641009 RPP40O75818 363 aaKnown RBP14.75□□□□□ -0.05
LINC00339-211ENST00000641009 CCDC192P0DO97 292 aa14.75□□□□□ -0.05
LINC00339-211ENST00000641009 ATXN1P54253 815 aaKnown RBP14.75□□□□□ -0.05
LINC00339-211ENST00000641009 SEC13P55735 322 aa14.75□□□□□ -0.05
LINC00339-211ENST00000641009 MAP3K7CLP57077 242 aa14.75□□□□□ -0.05
LINC00339-211ENST00000641009 ARHGAP8P85298 464 aa14.75□□□□□ -0.05
LINC00339-211ENST00000641009 PPP3CAQ08209 521 aa14.75□□□□□ -0.05
LINC00339-211ENST00000641009 DMC1Q14565 340 aa14.75□□□□□ -0.05
LINC00339-211ENST00000641009 DHCR24Q15392 516 aa14.75□□□□□ -0.05
LINC00339-211ENST00000641009 HECTD3Q5T447 861 aa14.75□□□□□ -0.05
LINC00339-211ENST00000641009 INTS8Q75QN2 995 aaKnown RBP14.75□□□□□ -0.05
LINC00339-211ENST00000641009 SYT13Q7L8C5 426 aa14.75□□□□□ -0.05
LINC00339-211ENST00000641009 KBTBD6Q86V97 674 aa14.75□□□□□ -0.05
LINC00339-211ENST00000641009 UNC93AQ86WB7 457 aa14.75□□□□□ -0.05
LINC00339-211ENST00000641009 FAM186BQ8IYM0 893 aa14.75□□□□□ -0.05
LINC00339-211ENST00000641009 SMYD4Q8IYR2 804 aaPredicted RBP14.75□□□□□ -0.05
LINC00339-211ENST00000641009 CRYBG2Q8N1P7 616 aa14.75□□□□□ -0.05
LINC00339-211ENST00000641009 GUF1Q8N442 669 aaKnown RBP14.75□□□□□ -0.05
LINC00339-211ENST00000641009 CAMKK1Q8N5S9 505 aa14.75□□□□□ -0.05
LINC00339-211ENST00000641009 TAS1R2Q8TE23 839 aa14.75□□□□□ -0.05
LINC00339-211ENST00000641009 TWNKQ96RR1 684 aa14.75□□□□□ -0.05
LINC00339-211ENST00000641009 APOBEC3GQ9HC16 384 aaKnown RBP14.75□□□□□ -0.05
LINC00339-211ENST00000641009 IL37Q9NZH6 218 aa14.75□□□□□ -0.05
LINC00339-211ENST00000641009 CNOT1A5YKK6 2376 aaKnown RBP14.74□□□□□ -0.05
LINC00339-211ENST00000641009 K7EQS6 105 aa14.74□□□□□ -0.05
LINC00339-211ENST00000641009 SLC9A3R1O14745 358 aaPredicted RBP14.74□□□□□ -0.05
LINC00339-211ENST00000641009 AXIN1O15169 862 aa14.74□□□□□ -0.05
LINC00339-211ENST00000641009 KRT13P13646 458 aa14.74□□□□□ -0.05
LINC00339-211ENST00000641009 ADORA2BP29275 332 aa14.74□□□□□ -0.05
LINC00339-211ENST00000641009 PGFP49763 221 aa14.74□□□□□ -0.05
LINC00339-211ENST00000641009 MESP2Q0VG99 397 aa14.74□□□□□ -0.05
LINC00339-211ENST00000641009 ADAM9Q13443 819 aa14.74□□□□□ -0.05
LINC00339-211ENST00000641009 CCDC6Q16204 474 aa14.74□□□□□ -0.05
LINC00339-211ENST00000641009 C2orf27AQ580R0 203 aa14.74□□□□□ -0.05
LINC00339-211ENST00000641009 SNX30Q5VWJ9 437 aa14.74□□□□□ -0.05
LINC00339-211ENST00000641009 RHBDF2Q6PJF5 856 aa14.74□□□□□ -0.05
LINC00339-211ENST00000641009 PRR23CQ6ZRP0 262 aa14.74□□□□□ -0.05
LINC00339-211ENST00000641009 DDX42Q86XP3 938 aaKnown RBP eCLIP14.74□□□□□ -0.05
LINC00339-211ENST00000641009 SFTPA1Q8IWL2 248 aa14.74□□□□□ -0.05
LINC00339-211ENST00000641009 KIAA1958Q8N8K9 716 aa14.74□□□□□ -0.05
LINC00339-211ENST00000641009 EEF2KMTQ96G04 330 aa14.74□□□□□ -0.05
LINC00339-211ENST00000641009 IMPG2Q9BZV3 1241 aa14.74□□□□□ -0.05
LINC00339-211ENST00000641009 CSNK1G1Q9HCP0 422 aa14.74□□□□□ -0.05
LINC00339-211ENST00000641009 FAM92AA1XBS5 289 aa14.73□□□□□ -0.05
LINC00339-211ENST00000641009 ZDHHC11BP0C7U3 371 aa14.73□□□□□ -0.05
LINC00339-211ENST00000641009 SDHBP21912 280 aa14.73□□□□□ -0.05
LINC00339-211ENST00000641009 RPL13P26373 211 aaKnown RBP14.73□□□□□ -0.05
LINC00339-211ENST00000641009 PSMC2P35998 433 aaKnown RBP14.73□□□□□ -0.05
LINC00339-211ENST00000641009 SLC6A11P48066 632 aa14.73□□□□□ -0.05
LINC00339-211ENST00000641009 INCA1Q0VD86 236 aa14.73□□□□□ -0.05
LINC00339-211ENST00000641009 CSRP2Q16527 193 aa14.73□□□□□ -0.05
LINC00339-211ENST00000641009 ZCWPW2Q504Y3 356 aa14.73□□□□□ -0.05
LINC00339-211ENST00000641009 GPRIN1Q7Z2K8 1008 aa14.73□□□□□ -0.05
LINC00339-211ENST00000641009 CACNA2D4Q7Z3S7 1137 aa14.73□□□□□ -0.05
LINC00339-211ENST00000641009 C12orf40Q86WS4 652 aa14.73□□□□□ -0.05
LINC00339-211ENST00000641009 USP33Q8TEY7 942 aa14.73□□□□□ -0.05
LINC00339-211ENST00000641009 JAKMIP2Q96AA8 810 aa14.73□□□□□ -0.05
LINC00339-211ENST00000641009 ACDQ96AP0 544 aa14.73□□□□□ -0.05
LINC00339-211ENST00000641009 ARRDC1-AS1Q9H2J1 176 aa14.73□□□□□ -0.05
LINC00339-211ENST00000641009 PLXND1Q9Y4D7 1925 aa14.73□□□□□ -0.05
LINC00339-211ENST00000641009 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.72□□□□□ -0.05
LINC00339-211ENST00000641009 E2F8A0AVK6 867 aa14.72□□□□□ -0.05
LINC00339-211ENST00000641009 GDF9O60383 454 aa14.72□□□□□ -0.05
LINC00339-211ENST00000641009 APBB3O95704 486 aa14.72□□□□□ -0.05
LINC00339-211ENST00000641009 FAM200BP0CF97 657 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms