RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-238ENST00000638755 GTF3C4Q9UKN8 822 aa12.56□□□□□ -0.4
PAX6-238ENST00000638755 DNM3Q9UQ16 869 aa12.56□□□□□ -0.4
PAX6-238ENST00000638755 OGTO15294 1046 aa12.55□□□□□ -0.4
PAX6-238ENST00000638755 SLC28A2O43868 658 aa12.55□□□□□ -0.4
PAX6-238ENST00000638755 FAM189A1O60320 539 aa12.55□□□□□ -0.4
PAX6-238ENST00000638755 TULP3O75386 442 aa12.55□□□□□ -0.4
PAX6-238ENST00000638755 CTDNEP1O95476 244 aa12.55□□□□□ -0.4
PAX6-238ENST00000638755 ADRB2P07550 413 aa12.55□□□□□ -0.4
PAX6-238ENST00000638755 HNF1BP35680 557 aa12.55□□□□□ -0.4
PAX6-238ENST00000638755 CSNK1EP49674 416 aaKnown RBP12.55□□□□□ -0.4
PAX6-238ENST00000638755 TLE3Q04726 772 aa12.55□□□□□ -0.4
PAX6-238ENST00000638755 GAD2Q05329 585 aa12.55□□□□□ -0.4
PAX6-238ENST00000638755 LY6DQ14210 128 aa12.55□□□□□ -0.4
PAX6-238ENST00000638755 ZNF174Q15697 407 aa12.55□□□□□ -0.4
PAX6-238ENST00000638755 NUDT18Q6ZVK8 323 aa12.55□□□□□ -0.4
PAX6-238ENST00000638755 C1orf186Q6ZWK4 172 aa12.55□□□□□ -0.4
PAX6-238ENST00000638755 CD302Q8IX05 232 aa12.55□□□□□ -0.4
PAX6-238ENST00000638755 TERB1Q8NA31 727 aa12.55□□□□□ -0.4
PAX6-238ENST00000638755 SPIRE2Q8WWL2 714 aa12.55□□□□□ -0.4
PAX6-238ENST00000638755 CD248Q9HCU0 757 aa12.55□□□□□ -0.4
PAX6-238ENST00000638755 DDX43Q9NXZ2 648 aaKnown RBP12.55□□□□□ -0.4
PAX6-238ENST00000638755 DPP3Q9NY33 737 aa12.55□□□□□ -0.4
PAX6-238ENST00000638755 LRWD1Q9UFC0 647 aa12.55□□□□□ -0.4
PAX6-238ENST00000638755 EIF2B4Q9UI10 523 aaKnown RBP12.55□□□□□ -0.4
PAX6-238ENST00000638755 TULP1O00294 542 aaPredicted RBP12.54□□□□□ -0.4
PAX6-238ENST00000638755 KCNK3O14649 394 aa12.54□□□□□ -0.4
PAX6-238ENST00000638755 HNRNPDLO14979 420 aaKnown RBP12.54□□□□□ -0.4
PAX6-238ENST00000638755 PLS3P13797 630 aa12.54□□□□□ -0.4
PAX6-238ENST00000638755 FDPSP14324 419 aaKnown RBP12.54□□□□□ -0.4
PAX6-238ENST00000638755 GRK6P43250 576 aa12.54□□□□□ -0.4
PAX6-238ENST00000638755 USP46P62068 366 aa12.54□□□□□ -0.4
PAX6-238ENST00000638755 SLC7A9P82251 487 aa12.54□□□□□ -0.4
PAX6-238ENST00000638755 MAPK8IP2Q13387 824 aaPredicted RBP12.54□□□□□ -0.4
PAX6-238ENST00000638755 SF3A1Q15459 793 aaKnown RBP12.54□□□□□ -0.4
PAX6-238ENST00000638755 ANO4Q32M45 955 aa12.54□□□□□ -0.4
PAX6-238ENST00000638755 SV2CQ496J9 727 aa12.54□□□□□ -0.4
PAX6-238ENST00000638755 INTS6LQ5JSJ4 861 aaKnown RBP12.54□□□□□ -0.4
PAX6-238ENST00000638755 SPACA3Q8IXA5 215 aa12.54□□□□□ -0.4
PAX6-238ENST00000638755 ETFBKMTQ8IXQ9 262 aa12.54□□□□□ -0.4
PAX6-238ENST00000638755 PDCL2Q8N4E4 241 aa12.54□□□□□ -0.4
PAX6-238ENST00000638755 ENGASEQ8NFI3 743 aa12.54□□□□□ -0.4
PAX6-238ENST00000638755 SNX29Q8TEQ0 813 aa12.54□□□□□ -0.4
PAX6-238ENST00000638755 ACBD6Q9BR61 282 aa12.54□□□□□ -0.4
PAX6-238ENST00000638755 MSTO1Q9BUK6 570 aa12.54□□□□□ -0.4
PAX6-238ENST00000638755 CCSER1Q9C0I3 900 aa12.54□□□□□ -0.4
PAX6-238ENST00000638755 WSB2Q9NYS7 404 aaPredicted RBP12.54□□□□□ -0.4
PAX6-238ENST00000638755 TBC1D14Q9P2M4 693 aa12.54□□□□□ -0.4
PAX6-238ENST00000638755 FTSJ1Q9UET6 329 aa12.54□□□□□ -0.4
PAX6-238ENST00000638755 NFE2L3Q9Y4A8 694 aa12.54□□□□□ -0.4
PAX6-238ENST00000638755 MBL2P11226 248 aaPredicted RBP12.53□□□□□ -0.4
PAX6-238ENST00000638755 KRT10P13645 584 aa12.53□□□□□ -0.4
PAX6-238ENST00000638755 C6P13671 934 aa12.53□□□□□ -0.4
PAX6-238ENST00000638755 PFKLP17858 780 aa12.53□□□□□ -0.4
PAX6-238ENST00000638755 IL12RB1P42701 662 aa12.53□□□□□ -0.4
PAX6-238ENST00000638755 TARDBPQ13148 414 aaKnown RBP eCLIP12.53□□□□□ -0.4
PAX6-238ENST00000638755 KIF19Q2TAC6 998 aa12.53□□□□□ -0.4
PAX6-238ENST00000638755 KIAA1958Q8N8K9 716 aa12.53□□□□□ -0.4
PAX6-238ENST00000638755 CADM4Q8NFZ8 388 aa12.53□□□□□ -0.4
PAX6-238ENST00000638755 SNIP1Q8TAD8 396 aaKnown RBP12.53□□□□□ -0.4
PAX6-238ENST00000638755 SNX19Q92543 992 aa12.53□□□□□ -0.4
PAX6-238ENST00000638755 FGF11Q92914 225 aa12.53□□□□□ -0.4
PAX6-238ENST00000638755 PDRG1Q9NUG6 133 aa12.53□□□□□ -0.4
PAX6-238ENST00000638755 CPSF3Q9UKF6 684 aaKnown RBP12.53□□□□□ -0.4
PAX6-238ENST00000638755 L1RE1Q9UN81 338 aa12.53□□□□□ -0.4
PAX6-238ENST00000638755 DERAQ9Y315 318 aa12.53□□□□□ -0.4
PAX6-238ENST00000638755 PCDHB6Q9Y5E3 794 aa12.53□□□□□ -0.4
PAX6-238ENST00000638755 SNX11Q9Y5W9 270 aa12.53□□□□□ -0.4
PAX6-238ENST00000638755 COL5A1P20908 1838 aaPredicted RBP12.53□□□□□ -0.4
PAX6-238ENST00000638755 MYH11P35749 1972 aa12.52□□□□□ -0.4
PAX6-238ENST00000638755 TEX15Q9BXT5 2789 aa12.52□□□□□ -0.41
PAX6-238ENST00000638755 ZNF840PA6NDX5 716 aa12.52□□□□□ -0.41
PAX6-238ENST00000638755 METTL12A8MUP2 240 aa12.52□□□□□ -0.41
PAX6-238ENST00000638755 WASH3PC4AMC7 463 aa12.52□□□□□ -0.41
PAX6-238ENST00000638755 HCRTO43612 131 aa12.52□□□□□ -0.41
PAX6-238ENST00000638755 GRIK1P39086 918 aa12.52□□□□□ -0.41
PAX6-238ENST00000638755 ACOT2P49753 483 aa12.52□□□□□ -0.41
PAX6-238ENST00000638755 IL9RQ01113 521 aa12.52□□□□□ -0.41
PAX6-238ENST00000638755 MYL7Q01449 175 aa12.52□□□□□ -0.41
PAX6-238ENST00000638755 RHDQ02161 417 aa12.52□□□□□ -0.41
PAX6-238ENST00000638755 KCNH2Q12809 1159 aa12.52□□□□□ -0.41
PAX6-238ENST00000638755 CFAP221Q4G0U5 840 aa12.52□□□□□ -0.41
PAX6-238ENST00000638755 ARHGAP40Q5TG30 622 aa12.52□□□□□ -0.41
PAX6-238ENST00000638755 GRAMD4Q6IC98 578 aa12.52□□□□□ -0.41
PAX6-238ENST00000638755 USP49Q70CQ1 688 aa12.52□□□□□ -0.41
PAX6-238ENST00000638755 PRICKLE2Q7Z3G6 844 aa12.52□□□□□ -0.41
PAX6-238ENST00000638755 TMEM176AQ96HP8 235 aa12.52□□□□□ -0.41
PAX6-238ENST00000638755 NAF1Q96HR8 494 aaKnown RBP12.52□□□□□ -0.41
PAX6-238ENST00000638755 PKMYT1Q99640 499 aa12.52□□□□□ -0.41
PAX6-238ENST00000638755 GABRG3Q99928 467 aa12.52□□□□□ -0.41
PAX6-238ENST00000638755 KCNG1Q9UIX4 513 aa12.52□□□□□ -0.41
PAX6-238ENST00000638755 STARD13Q9Y3M8 1113 aa12.52□□□□□ -0.41
PAX6-238ENST00000638755 SLCO1B1Q9Y6L6 691 aa12.52□□□□□ -0.41
PAX6-238ENST00000638755 TMEM131Q92545 1883 aa12.51□□□□□ -0.41
PAX6-238ENST00000638755 A0A0B4J269 797 aa12.51□□□□□ -0.41
PAX6-238ENST00000638755 KCNJ18B7U540 433 aa12.51□□□□□ -0.41
PAX6-238ENST00000638755 TRIM66O15016 1216 aa12.51□□□□□ -0.41
PAX6-238ENST00000638755 HOXC11O43248 304 aaPredicted RBP12.51□□□□□ -0.41
PAX6-238ENST00000638755 BRINP1O60477 761 aa12.51□□□□□ -0.41
PAX6-238ENST00000638755 PFKFB2O60825 505 aa12.51□□□□□ -0.41
PAX6-238ENST00000638755 HUS1O60921 280 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms