RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 KCNT1Q5JUK3 1230 aa12.05□□□□□ -0.48
CLN6-217ENST00000636964 FBXO47Q5MNV8 452 aa12.05□□□□□ -0.48
CLN6-217ENST00000636964 RSRC1Q96IZ7 334 aaKnown RBP12.05□□□□□ -0.48
CLN6-217ENST00000636964 PIWIL1Q96J94 861 aaKnown RBP12.05□□□□□ -0.48
CLN6-217ENST00000636964 CCT8L1PA6NM43 557 aa12.05□□□□□ -0.48
CLN6-217ENST00000636964 KPNA7A9QM74 516 aa12.05□□□□□ -0.48
CLN6-217ENST00000636964 KPNA6O60684 536 aa12.05□□□□□ -0.48
CLN6-217ENST00000636964 FGFR1P11362 822 aa12.05□□□□□ -0.48
CLN6-217ENST00000636964 HSPA6P17066 643 aa12.05□□□□□ -0.48
CLN6-217ENST00000636964 ATF7P17544 494 aaPredicted RBP12.05□□□□□ -0.48
CLN6-217ENST00000636964 PLTPP55058 493 aa12.05□□□□□ -0.48
CLN6-217ENST00000636964 TRIP13Q15645 432 aaPredicted RBP12.05□□□□□ -0.48
CLN6-217ENST00000636964 CLUL1Q15846 466 aa12.05□□□□□ -0.48
CLN6-217ENST00000636964 MAMSTRQ6ZN01 415 aa12.05□□□□□ -0.48
CLN6-217ENST00000636964 RNF169Q8NCN4 708 aa12.05□□□□□ -0.48
CLN6-217ENST00000636964 B4GALNT2Q8NHY0 566 aa12.05□□□□□ -0.48
CLN6-217ENST00000636964 CD99L2Q8TCZ2 262 aa12.05□□□□□ -0.48
CLN6-217ENST00000636964 DHRS1Q96LJ7 313 aa12.05□□□□□ -0.48
CLN6-217ENST00000636964 ZNF317Q96PQ6 595 aaPredicted RBP12.05□□□□□ -0.48
CLN6-217ENST00000636964 ZWILCHQ9H900 591 aa12.05□□□□□ -0.48
CLN6-217ENST00000636964 AGO3Q9H9G7 860 aaKnown RBP12.05□□□□□ -0.48
CLN6-217ENST00000636964 STRIP2Q9ULQ0 834 aa12.05□□□□□ -0.48
CLN6-217ENST00000636964 NOVA2Q9UNW9 492 aaKnown RBP12.05□□□□□ -0.48
CLN6-217ENST00000636964 TRPV2Q9Y5S1 764 aa12.05□□□□□ -0.48
CLN6-217ENST00000636964 E5RJQ4 531 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 PSTPIP1O43586 416 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 STAU1O95793 577 aaKnown RBP12.04□□□□□ -0.48
CLN6-217ENST00000636964 HMGCRP04035 888 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 MYZAPP0CAP1 466 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 KCNJ2P63252 427 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 FAM102AQ5T9C2 384 aaPredicted RBP12.04□□□□□ -0.48
CLN6-217ENST00000636964 OR6B2Q6IFH4 312 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 LRIG3Q6UXM1 1119 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 CENPOQ9BU64 300 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 OSBPL8Q9BZF1 889 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 RAB17Q9H0T7 212 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 MMADHCQ9H3L0 296 aaPredicted RBP12.04□□□□□ -0.48
CLN6-217ENST00000636964 PCSK1NQ9UHG2 260 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 SIGLEC16A6NMB1 481 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 PIRO00625 290 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 ZNF189O75820 626 aaPredicted RBP12.04□□□□□ -0.48
CLN6-217ENST00000636964 KRT1P04264 644 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 PFKMP08237 780 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 ALADP13716 330 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 MAGOHP61326 146 aaKnown RBP12.04□□□□□ -0.48
CLN6-217ENST00000636964 CCDC142Q17RM4 750 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 RAB6CQ53S08 254 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 ODF2Q5BJF6 829 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 DUPD1Q68J44 220 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 MFSD7Q6UXD7 560 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 TBC1D1Q86TI0 1168 aaPredicted RBP12.04□□□□□ -0.48
CLN6-217ENST00000636964 RSPH3Q86UC2 560 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 ARFGAP1Q8N6T3 406 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 RAB6CQ9H0N0 254 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 PTGESO14684 152 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 CCDC130P13994 396 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 ADORA2BP29275 332 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 MLH1P40692 756 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 MPP3Q13368 585 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 DHX34Q14147 1143 aaKnown RBP12.04□□□□□ -0.48
CLN6-217ENST00000636964 TAF5Q15542 800 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 PPP2R5EQ16537 467 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 SH3PXD2AQ5TCZ1 1133 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 CAPRIN2Q6IMN6 1127 aaKnown RBP12.04□□□□□ -0.48
CLN6-217ENST00000636964 PMF1Q6P1K2 205 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 LCLAT1Q6UWP7 414 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 KATNAL2Q8IYT4 538 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 LRRC52Q8N7C0 313 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 HHIPL1Q96JK4 782 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 GAD1Q99259 594 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 UPF3AQ9H1J1 476 aaKnown RBP12.04□□□□□ -0.48
CLN6-217ENST00000636964 TRMT13Q9NUP7 481 aaKnown RBP12.04□□□□□ -0.48
CLN6-217ENST00000636964 PCYOX1Q9UHG3 505 aa12.04□□□□□ -0.48
CLN6-217ENST00000636964 SCN10AQ9Y5Y9 1956 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 DIAPH2O60879 1101 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 KRT38O76015 456 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 RPL21P46778 160 aaKnown RBP12.03□□□□□ -0.48
CLN6-217ENST00000636964 VPS41P49754 854 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 PIGHQ14442 188 aaPredicted RBP12.03□□□□□ -0.48
CLN6-217ENST00000636964 PRUNE1Q86TP1 453 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 SERINC5Q86VE9 423 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 SCUBE3Q8IX30 993 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 HAUS1Q96CS2 278 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 BATF3Q9NR55 127 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 FAM114A2Q9NRY5 505 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 MIOSQ9NXC5 875 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 LRRD1A4D1F6 860 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 FAM187AA6NFU0 413 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 CD4P01730 458 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 IL1R2P27930 398 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 CD52P31358 61 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 GNL1P36915 607 aaPredicted RBP12.03□□□□□ -0.48
CLN6-217ENST00000636964 RIPK1Q13546 671 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 CYP1B1Q16678 543 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 GKAP1Q5VSY0 366 aaPredicted RBP12.03□□□□□ -0.48
CLN6-217ENST00000636964 FBXO25Q8TCJ0 367 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 KBTBD7Q8WVZ9 684 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 B3GNT5Q9BYG0 378 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 YIPF3Q9GZM5 350 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 MIS12Q9H081 205 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms