RNA–Protein interactions for RNA: ENST00000636102.1

ARHGEF9-223, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 2,112 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-223	ENST00000636102	VSTM1	Q6UX27	236 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	SV2A	Q7L0J3	742 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	VSIG1	Q86XK7	387 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	UCMA	Q8WVF2	138 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	TMEM40	Q8WWA1	233 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	DDX1	Q92499	740 aa	Known RBP	11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	SEMA4D	Q92854	862 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	WNT8B	Q93098	351 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	C18orf8	Q96DM3	657 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	TGS1	Q96RS0	853 aa	Known RBP	11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	IL1RAPL1	Q9NZN1	696 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	TNFSF13B	Q9Y275	285 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	USH1C	Q9Y6N9	552 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	THSD7B	Q9C0I4	1608 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	WDR81	Q562E7	1941 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	CEP350	Q5VT06	3117 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	SMIM23	A6NLE4	172 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	TMEM110-MUSTN1	A8MSY1	372 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	TSPAN1	O60635	241 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	GAS8	O95995	478 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	CCDC166	P0CW27	439 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	DARS	P14868	501 aa	Known RBP	11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	DES	P17661	470 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	OSTN	P61366	133 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	CENPC	Q03188	943 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	LSAMP	Q13449	338 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	ITGA7	Q13683	1181 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	PSMD6	Q15008	389 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	ZNF568	Q3ZCX4	644 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	LMBRD2	Q68DH5	695 aa	Predicted RBP	11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	MPZL3	Q6UWV2	235 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	C15orf39	Q6ZRI6	1047 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	ARHGEF18	Q6ZSZ5	1173 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	THNSL1	Q8IYQ7	743 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	NME8	Q8N427	588 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	ZNF516	Q92618	1163 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	ARHGEF2	Q92974	986 aa	Known RBP	11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	TBC1D10A	Q9BXI6	508 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	MYLK2	Q9H1R3	596 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	SEMA4A	Q9H3S1	761 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	MRPL47	Q9HD33	250 aa	Known RBP	11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	GALNT8	Q9NY28	637 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	RBAK	Q9NYW8	714 aa	Predicted RBP	11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	ZNF510	Q9Y2H8	683 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	STARD13	Q9Y3M8	1113 aa		11.19	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	SMAP	O00193	183 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	NDC80	O14777	642 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	OGT	O15294	1046 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	UNG	P13051	313 aa	Predicted RBP	11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	EIF4B	P23588	611 aa	Known RBP	11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	CETN2	P41208	172 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	RPL21	P46778	160 aa	Known RBP	11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	SERPINB4	P48594	390 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	CNPY1	Q3B7I2	92 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	LIN9	Q5TKA1	542 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	ZNF365	Q70YC5	407 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	TMEM192	Q8IY95	271 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	TAS1R2	Q8TE23	839 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	KAT5	Q92993	513 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	FNBP1	Q96RU3	617 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	SPATA16	Q9BXB7	569 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	FOXP3	Q9BZS1	431 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	CDT1	Q9H211	546 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	PDZD7	Q9H5P4	517 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	DENND2D	Q9H6A0	471 aa	Predicted RBP	11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	DDX43	Q9NXZ2	648 aa	Known RBP	11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	LNPEP	Q9UIQ6	1025 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	TBXAS1	P24557	533 aa	Predicted RBP	11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	HOXA11	P31270	313 aa	Predicted RBP	11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	AP3M2	P53677	418 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	SNX17	Q15036	470 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	LRRC14	Q15048	493 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	SIX1	Q15475	284 aa	Predicted RBP	11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	CCDC6	Q16204	474 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	SNX30	Q5VWJ9	437 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	TAF2	Q6P1X5	1199 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	PPP1R21	Q6ZMI0	780 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	CATSPER4	Q7RTX7	472 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	ADAT2	Q7Z6V5	191 aa	Known RBP	11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	MCOLN2	Q8IZK6	566 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	PPFIBP2	Q8ND30	876 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	LRRC37B	Q96QE4	947 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	CPSF3	Q9UKF6	684 aa	Known RBP	11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	SCIN	Q9Y6U3	715 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	CNTNAP2	Q9UHC6	1331 aa		11.18	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	MOXD2P	A6NHM9	499 aa		11.17	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	PSTPIP1	O43586	416 aa		11.17	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	CABYR	O75952	493 aa		11.17	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	KRT5	P13647	590 aa		11.17	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	TNNI1	P19237	187 aa		11.17	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	PTPN4	P29074	926 aa		11.17	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	STX2	P32856	288 aa		11.17	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	NSF	P46459	744 aa	Known RBP	11.17	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	CD151	P48509	253 aa		11.17	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	CRYBB1	P53674	252 aa	Predicted RBP	11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms