RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 EPHB3P54753 998 aa15.2■□□□□ 0.02
LINC00339-208ENST00000634934 GNG11P61952 73 aa15.2■□□□□ 0.02
LINC00339-208ENST00000634934 HYAL1Q12794 435 aa15.2■□□□□ 0.02
LINC00339-208ENST00000634934 PLD1Q13393 1074 aa15.2■□□□□ 0.02
LINC00339-208ENST00000634934 VEPH1Q14D04 833 aa15.2■□□□□ 0.02
LINC00339-208ENST00000634934 SKIV2LQ15477 1246 aaKnown RBP15.2■□□□□ 0.02
LINC00339-208ENST00000634934 PTPN20Q4JDL3 420 aa15.2■□□□□ 0.02
LINC00339-208ENST00000634934 C2CD6Q53TS8 623 aa15.2■□□□□ 0.02
LINC00339-208ENST00000634934 PPM1LQ5SGD2 360 aa15.2■□□□□ 0.02
LINC00339-208ENST00000634934 PPP1R2P3Q6NXS1 205 aa15.2■□□□□ 0.02
LINC00339-208ENST00000634934 TOGARAM2Q6ZUX3 1019 aa15.2■□□□□ 0.02
LINC00339-208ENST00000634934 GPRIN1Q7Z2K8 1008 aa15.2■□□□□ 0.02
LINC00339-208ENST00000634934 SIX6OS1Q8N1H7 587 aa15.2■□□□□ 0.02
LINC00339-208ENST00000634934 CEP112Q8N8E3 955 aa15.2■□□□□ 0.02
LINC00339-208ENST00000634934 SLC4A5Q9BY07 1137 aa15.2■□□□□ 0.02
LINC00339-208ENST00000634934 PNPLA8Q9NP80 782 aa15.2■□□□□ 0.02
LINC00339-208ENST00000634934 ADAM22Q9P0K1 906 aa15.2■□□□□ 0.02
LINC00339-208ENST00000634934 EIF3CLB5ME19 914 aaKnown RBP15.19■□□□□ 0.02
LINC00339-208ENST00000634934 E5RJQ4 531 aa15.19■□□□□ 0.02
LINC00339-208ENST00000634934 ZNF263O14978 683 aa15.19■□□□□ 0.02
LINC00339-208ENST00000634934 MMP8P22894 467 aa15.19■□□□□ 0.02
LINC00339-208ENST00000634934 ACADSBP45954 432 aa15.19■□□□□ 0.02
LINC00339-208ENST00000634934 TKTL1P51854 596 aa15.19■□□□□ 0.02
LINC00339-208ENST00000634934 SLC5A3P53794 718 aa15.19■□□□□ 0.02
LINC00339-208ENST00000634934 SNX16P57768 344 aa15.19■□□□□ 0.02
LINC00339-208ENST00000634934 ADIGQ0VDE8 80 aa15.19■□□□□ 0.02
LINC00339-208ENST00000634934 BRD3Q15059 726 aa15.19■□□□□ 0.02
LINC00339-208ENST00000634934 TAF12Q16514 161 aa15.19■□□□□ 0.02
LINC00339-208ENST00000634934 CYP4A22Q5TCH4 519 aa15.19■□□□□ 0.02
LINC00339-208ENST00000634934 PHLDB2Q86SQ0 1253 aa15.19■□□□□ 0.02
LINC00339-208ENST00000634934 PHF13Q86YI8 300 aaPredicted RBP15.19■□□□□ 0.02
LINC00339-208ENST00000634934 NUP93Q8N1F7 819 aa15.19■□□□□ 0.02
LINC00339-208ENST00000634934 VN1R2Q8NFZ6 395 aa15.19■□□□□ 0.02
LINC00339-208ENST00000634934 SCAMP5Q8TAC9 235 aa15.19■□□□□ 0.02
LINC00339-208ENST00000634934 KCTD13Q8WZ19 329 aa15.19■□□□□ 0.02
LINC00339-208ENST00000634934 SPATA17Q96L03 361 aa15.19■□□□□ 0.02
LINC00339-208ENST00000634934 EIF3CQ99613 913 aaKnown RBP15.19■□□□□ 0.02
LINC00339-208ENST00000634934 DESI2Q9BSY9 194 aa15.19■□□□□ 0.02
LINC00339-208ENST00000634934 MIS12Q9H081 205 aa15.19■□□□□ 0.02
LINC00339-208ENST00000634934 TJP2Q9UDY2 1190 aa15.19■□□□□ 0.02
LINC00339-208ENST00000634934 MAGED2Q9UNF1 606 aaPredicted RBP15.19■□□□□ 0.02
LINC00339-208ENST00000634934 CCDC151A5D8V7 595 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 SLC38A8A6NNN8 435 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 TNFRSF10BO14763 440 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 CCL16O15467 120 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 LINC01565O15544 149 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 KIF5CO60282 957 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 RFPL2O75678 378 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 ZMYND10O75800 440 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 GABBR2O75899 941 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 ERBB2P04626 1255 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 CALB1P05937 261 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 ABCB4P21439 1286 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 MAGEA1P43355 309 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 MTMR3Q13615 1198 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 OR6B2Q6IFH4 312 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 DENND5BQ6ZUT9 1274 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 TMEM110Q86TL2 294 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 MCOLN2Q8IZK6 566 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 EFHBQ8N7U6 833 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 ACRBPQ8NEB7 543 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 HDAC7Q8WUI4 952 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 GOLGA1Q92805 767 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 CASP10Q92851 521 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 C18orf8Q96DM3 657 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 WDR24Q96S15 920 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 ISCUQ9H1K1 167 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 CYLDQ9NQC7 956 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 NENFQ9UMX5 172 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 PLXNA3P51805 1871 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 PTPRDP23468 1912 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 MYH10P35580 1976 aa15.18■□□□□ 0.02
LINC00339-208ENST00000634934 LCA5LO95447 670 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 H2AFZP0C0S5 128 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 USP17L7P0C7H9 530 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 SRGAP2BP0DMP2 458 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 USP46P62068 366 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 KRT83P78385 493 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 C1QBPQ07021 282 aaKnown RBP15.17■□□□□ 0.02
LINC00339-208ENST00000634934 RAB41Q5JT25 222 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 EP400NLQ6ZTU2 488 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 H2AFVQ71UI9 128 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 MON1BQ7L1V2 547 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 RTL10Q7L3V2 364 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 ITIH5Q86UX2 942 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 SCUBE3Q8IX30 993 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 ELMOD1Q8N336 334 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 ZNF653Q96CK0 615 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 CEP295NLQ96MC4 621 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 CARD6Q9BX69 1037 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 PACSIN1Q9BY11 444 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 ULBP1Q9BZM6 244 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 LUC7LQ9NQ29 371 aaKnown RBP15.17■□□□□ 0.02
LINC00339-208ENST00000634934 CDC23Q9UJX2 597 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 PCDHA13Q9Y5I0 950 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 C5orf42Q9H799 3197 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 BRWD1Q9NSI6 2320 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 GOLGA8SH3BPF8 625 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 ATMINO43313 823 aaPredicted RBP15.17■□□□□ 0.02
LINC00339-208ENST00000634934 RTN3O95197 1032 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms