RNA–Protein interactions for RNA: ENST00000630482.2

SOX2-OT-256, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 1,012 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-256	ENST00000630482	PDE6C	P51160	858 aa		12.86	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	DLG4	P78352	724 aa		12.86	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	BIRC3	Q13489	604 aa		12.86	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	KNOP1	Q1ED39	458 aa	Known RBP	12.86	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	ZNF699	Q32M78	642 aa		12.86	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	12.86	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	EMC10	Q5UCC4	262 aa		12.86	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	RESP18	Q5W5W9	173 aa		12.86	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	C12orf56	Q8IXR9	622 aa		12.86	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	ALLC	Q8N6M5	410 aa		12.86	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	SCAMP5	Q8TAC9	235 aa		12.86	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	FBXO32	Q969P5	355 aa		12.86	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	EXOC4	Q96A65	974 aa		12.86	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	CHAMP1	Q96JM3	812 aa		12.86	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	CEP295NL	Q96MC4	621 aa		12.86	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	SLITRK1	Q96PX8	696 aa		12.86	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	EDEM2	Q9BV94	578 aa		12.86	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	CCSER2	Q9H7U1	834 aa		12.86	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	MAGEF1	Q9HAY2	307 aa		12.86	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	EBF1	Q9UH73	591 aa		12.86	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	MMP17	Q9ULZ9	603 aa		12.86	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	PCDHGA5	Q9Y5G8	931 aa		12.86	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	MUC22	E2RYF6	1773 aa	Predicted RBP	12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	PATE3	B3GLJ2	98 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	SGK1	O00141	431 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	COCH	O43405	550 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	FOXD2	O60548	495 aa	Predicted RBP	12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	ZSCAN22	P10073	491 aa	Predicted RBP	12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	IRF1	P10914	325 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	PFKL	P17858	780 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	YWHAQ	P27348	245 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	ME1	P48163	572 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	PGF	P49763	221 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	SLC5A3	P53794	718 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	STK4	Q13043	487 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	ELF2	Q15723	593 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	PMS2CL	Q68D20	193 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	RNF43	Q68DV7	783 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	RHBDF2	Q6PJF5	856 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	ACOT1	Q86TX2	421 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	RASSF3	Q86WH2	238 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	ADGRG2	Q8IZP9	1017 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	NUP93	Q8N1F7	819 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	FRMD1	Q8N878	549 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	TXNDC5	Q8NBS9	432 aa	Known RBP	12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	SPRYD3	Q8NCJ5	442 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	ZMIZ2	Q8NF64	920 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	SYAP1	Q96A49	352 aa	Predicted RBP	12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	MED10	Q9BTT4	135 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	VPS45	Q9NRW7	570 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	KRT82	Q9NSB4	513 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	GMIP	Q9P107	970 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	CHORDC1	Q9UHD1	332 aa	Predicted RBP	12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	PTPRB	P23467	1997 aa		12.85	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	FRY	Q5TBA9	3013 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	LNP1	A1A4G5	178 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	BCLAF3	A2AJT9	711 aa	Known RBP	12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	TNFRSF10B	O14763	440 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	ACTN4	O43707	911 aa	Known RBP	12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	BEST1	O76090	585 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	KAT7	O95251	611 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	KLF8	O95600	359 aa	Predicted RBP	12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	CAVIN2	O95810	425 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	C4BPA	P04003	597 aa	Known RBP	12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	ADH5	P11766	374 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	ATIC	P31939	592 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	PPP3CC	P48454	512 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	SNRPF	P62306	86 aa	Known RBP	12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	DNM1	Q05193	864 aa	Known RBP	12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	NCOA4	Q13772	614 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	NUMA1	Q14980	2115 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	CRY1	Q16526	586 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	ZNF667	Q5HYK9	610 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	LY6G5C	Q5SRR4	150 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	SPOPL	Q6IQ16	392 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	BBS7	Q8IWZ6	715 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	FUK	Q8N0W3	1084 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	PHTF2	Q8N3S3	785 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	NAT16	Q8N8M0	369 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	IL17RC	Q8NAC3	791 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	PARD3B	Q8TEW8	1205 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	RLN3	Q8WXF3	142 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	CNOT6L	Q96LI5	555 aa	Known RBP	12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	PNKP	Q96T60	521 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	VRTN	Q9H8Y1	702 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	FAM49B	Q9NUQ9	324 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	FAM13B	Q9NYF5	915 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	EHD2	Q9NZN4	543 aa		12.84	□□□□□ -0.35
SOX2-OT-256	ENST00000630482	WDFY3	Q8IZQ1	3526 aa		12.83	□□□□□ -0.36
SOX2-OT-256	ENST00000630482	PVALEF	A0A1B0GWK0	134 aa		12.83	□□□□□ -0.36
SOX2-OT-256	ENST00000630482	GIPC1	O14908	333 aa		12.83	□□□□□ -0.36
SOX2-OT-256	ENST00000630482	TRIM24	O15164	1050 aa		12.83	□□□□□ -0.36
SOX2-OT-256	ENST00000630482	ADAM23	O75077	832 aa		12.83	□□□□□ -0.36
SOX2-OT-256	ENST00000630482	AP1G2	O75843	785 aa		12.83	□□□□□ -0.36
SOX2-OT-256	ENST00000630482	RHOBTB1	O94844	696 aa		12.83	□□□□□ -0.36
SOX2-OT-256	ENST00000630482	RTN3	O95197	1032 aa	Predicted RBP	12.83	□□□□□ -0.36
SOX2-OT-256	ENST00000630482	APOD	P05090	189 aa		12.83	□□□□□ -0.36
SOX2-OT-256	ENST00000630482	PML	P29590	882 aa		12.83	□□□□□ -0.36
SOX2-OT-256	ENST00000630482	ST3GAL2	Q16842	350 aa		12.83	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms