RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 HERC2P3Q9BVR0 1158 aa19.52■□□□□ 0.72
SEMA6C-210ENST00000621728 PCDHB5Q9Y5E4 795 aa19.52■□□□□ 0.72
SEMA6C-210ENST00000621728 RANBP2P49792 3224 aaKnown RBP19.52■□□□□ 0.72
SEMA6C-210ENST00000621728 CEP290O15078 2479 aa19.52■□□□□ 0.71
SEMA6C-210ENST00000621728 CHD9Q3L8U1 2897 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 ARHGEF15O94989 841 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 PDGFRAP16234 1089 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 GPD1P21695 349 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 OR1D2P34982 312 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 CTNNA1P35221 906 aaKnown RBP19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 MAGEA10P43363 369 aaPredicted RBP19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 FAM193AP78312 1265 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 IFRD2Q12894 506 aaPredicted RBP19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 CFAP221Q4G0U5 840 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 TXNRD3NBQ6F5E7 133 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 CC2D1AQ6P1N0 951 aaPredicted RBP19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 GPR152Q8TDT2 470 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 ADAM33Q9BZ11 813 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 GBF1Q92538 1859 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 CHD7Q9P2D1 2997 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 WDR27A2RRH5 827 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 FGF18O76093 207 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 CSPG5O95196 566 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 GLUD2P49448 558 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 CLCN6P51797 869 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 SNX16P57768 344 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 MRPS5P82675 430 aaKnown RBP19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 CBX1P83916 185 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 ROR1Q01973 937 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 GPR17Q13304 367 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 NFE2Q16621 373 aaPredicted RBP19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 CDO1Q16878 200 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 ATP13A4Q4VNC1 1196 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 RASIP1Q5U651 963 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 SLC26A9Q7LBE3 791 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 DDX53Q86TM3 631 aaKnown RBP19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 ZDHHC17Q8IUH5 632 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 VPS52Q8N1B4 723 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 SP7Q8TDD2 431 aaPredicted RBP19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 FAM149B1Q96BN6 582 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 ACSF2Q96CM8 615 aaPredicted RBP19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 CLSTN3Q9BQT9 956 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 KLHL11Q9NVR0 708 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 PCDHB12Q9Y5F1 795 aa19.51■□□□□ 0.71
SEMA6C-210ENST00000621728 CEP104O60308 925 aa19.5■□□□□ 0.71
SEMA6C-210ENST00000621728 CTNNA2P26232 953 aa19.5■□□□□ 0.71
SEMA6C-210ENST00000621728 MAN1A1P33908 653 aa19.5■□□□□ 0.71
SEMA6C-210ENST00000621728 SLC1A1P43005 524 aa19.5■□□□□ 0.71
SEMA6C-210ENST00000621728 DAOAP59103 153 aa19.5■□□□□ 0.71
SEMA6C-210ENST00000621728 ATP11AP98196 1134 aa19.5■□□□□ 0.71
SEMA6C-210ENST00000621728 DSG1Q02413 1049 aa19.5■□□□□ 0.71
SEMA6C-210ENST00000621728 GABPB1Q06547 395 aaPredicted RBP19.5■□□□□ 0.71
SEMA6C-210ENST00000621728 PIGHQ14442 188 aaPredicted RBP19.5■□□□□ 0.71
SEMA6C-210ENST00000621728 CCDC14Q49A88 953 aa19.5■□□□□ 0.71
SEMA6C-210ENST00000621728 BHLHA9Q7RTU4 235 aa19.5■□□□□ 0.71
SEMA6C-210ENST00000621728 NIPA2Q8N8Q9 360 aa19.5■□□□□ 0.71
SEMA6C-210ENST00000621728 KLHL23Q8NBE8 558 aa19.5■□□□□ 0.71
SEMA6C-210ENST00000621728 CLP1Q92989 425 aaKnown RBP19.5■□□□□ 0.71
SEMA6C-210ENST00000621728 PCDHA3Q9Y5H8 950 aa19.5■□□□□ 0.71
SEMA6C-210ENST00000621728 MYO16Q9Y6X6 1858 aa19.5■□□□□ 0.71
SEMA6C-210ENST00000621728 YJEFN3A6XGL0 299 aa19.49■□□□□ 0.71
SEMA6C-210ENST00000621728 MIF4GDA9UHW6 222 aaKnown RBP19.49■□□□□ 0.71
SEMA6C-210ENST00000621728 E7ENQ6 273 aa19.49■□□□□ 0.71
SEMA6C-210ENST00000621728 TNFRSF10BO14763 440 aa19.49■□□□□ 0.71
SEMA6C-210ENST00000621728 LRCH4O75427 683 aa19.49■□□□□ 0.71
SEMA6C-210ENST00000621728 ZNF143P52747 638 aaPredicted RBP19.49■□□□□ 0.71
SEMA6C-210ENST00000621728 LLGL1Q15334 1064 aa19.49■□□□□ 0.71
SEMA6C-210ENST00000621728 PHOSPHO2Q8TCD6 241 aa19.49■□□□□ 0.71
SEMA6C-210ENST00000621728 FNIP1Q8TF40 1166 aa19.49■□□□□ 0.71
SEMA6C-210ENST00000621728 FUBP3Q96I24 572 aaKnown RBP eCLIP19.49■□□□□ 0.71
SEMA6C-210ENST00000621728 UBXN6Q9BZV1 441 aa19.49■□□□□ 0.71
SEMA6C-210ENST00000621728 AAASQ9NRG9 546 aa19.49■□□□□ 0.71
SEMA6C-210ENST00000621728 SLC5A3P53794 718 aa19.49■□□□□ 0.71
SEMA6C-210ENST00000621728 PITX1P78337 314 aaPredicted RBP19.49■□□□□ 0.71
SEMA6C-210ENST00000621728 DUSP4Q13115 394 aa19.49■□□□□ 0.71
SEMA6C-210ENST00000621728 BRD3Q15059 726 aa19.49■□□□□ 0.71
SEMA6C-210ENST00000621728 SHHQ15465 462 aa19.49■□□□□ 0.71
SEMA6C-210ENST00000621728 SLC8B1Q6J4K2 584 aa19.49■□□□□ 0.71
SEMA6C-210ENST00000621728 UBL4BQ8N7F7 174 aa19.49■□□□□ 0.71
SEMA6C-210ENST00000621728 SEPT5Q99719 369 aaPredicted RBP19.49■□□□□ 0.71
SEMA6C-210ENST00000621728 BACE2Q9Y5Z0 518 aa19.49■□□□□ 0.71
SEMA6C-210ENST00000621728 CCDC66A2RUB6 948 aa19.48■□□□□ 0.71
SEMA6C-210ENST00000621728 ZRANB2O95218 330 aaKnown RBP eCLIP19.48■□□□□ 0.71
SEMA6C-210ENST00000621728 ZBED1O96006 694 aa19.48■□□□□ 0.71
SEMA6C-210ENST00000621728 PYGMP11217 842 aa19.48■□□□□ 0.71
SEMA6C-210ENST00000621728 IL1R2P27930 398 aa19.48■□□□□ 0.71
SEMA6C-210ENST00000621728 PPM1AP35813 382 aa19.48■□□□□ 0.71
SEMA6C-210ENST00000621728 PGFP49763 221 aa19.48■□□□□ 0.71
SEMA6C-210ENST00000621728 MGAT5BQ3V5L5 792 aa19.48■□□□□ 0.71
SEMA6C-210ENST00000621728 DEFB106AQ8N104 65 aa19.48■□□□□ 0.71
SEMA6C-210ENST00000621728 PBKQ96KB5 322 aa19.48■□□□□ 0.71
SEMA6C-210ENST00000621728 CNPY3Q9BT09 278 aa19.48■□□□□ 0.71
SEMA6C-210ENST00000621728 CNGB3Q9NQW8 809 aa19.48■□□□□ 0.71
SEMA6C-210ENST00000621728 PCSK1NQ9UHG2 260 aa19.48■□□□□ 0.71
SEMA6C-210ENST00000621728 SPDYE4A6NLX3 237 aa19.47■□□□□ 0.71
SEMA6C-210ENST00000621728 URODP06132 367 aa19.47■□□□□ 0.71
SEMA6C-210ENST00000621728 FYNP06241 537 aa19.47■□□□□ 0.71
SEMA6C-210ENST00000621728 CTNNB1P35222 781 aa19.47■□□□□ 0.71
SEMA6C-210ENST00000621728 SCNN1AP37088 669 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms