RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 FER1L4A9Z1Z3 1794 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 POTECB2RU33 542 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 ATP9AO75110 1047 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 RASA1P20936 1047 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 VAMP7P51809 220 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 XIAPP98170 497 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 CDK17Q00537 523 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 SPDYCQ5MJ68 293 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 ZCCHC8Q6NZY4 707 aaKnown RBP7.41□□□□□ -1.22
COLCA1-205ENST00000620864 IZUMO2Q6UXV1 221 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 CHCHD6Q9BRQ6 235 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 OSBPL6Q9BZF3 934 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 BHMT2Q9H2M3 363 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 SORCS3Q9UPU3 1222 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 SHROOM2Q13796 1616 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 GH2P01242 217 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 MSH3P20585 1137 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 RCVRNP35243 200 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 GRIK1P39086 918 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 USP10Q14694 798 aaKnown RBP7.41□□□□□ -1.22
COLCA1-205ENST00000620864 STYK1Q6J9G0 422 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 TEX13BQ9BXU2 312 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 GANQ9H2C0 597 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 RSAD1Q9HA92 442 aa7.41□□□□□ -1.22
COLCA1-205ENST00000620864 SARS2Q9NP81 518 aaKnown RBP7.41□□□□□ -1.22
COLCA1-205ENST00000620864 SAGE2PA6NJ88 616 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 GAS2O43903 313 aaKnown RBP7.4□□□□□ -1.22
COLCA1-205ENST00000620864 PRMT3O60678 531 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 ASMTLO95671 621 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 NAA20P61599 178 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 RPS6P62753 249 aaKnown RBP7.4□□□□□ -1.22
COLCA1-205ENST00000620864 PDK1Q15118 436 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 CCDC153Q494R4 210 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 FOXR1Q6PIV2 292 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 RASSF6Q6ZTQ3 369 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 UBASH3BQ8TF42 649 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 HEMGNQ9BXL5 484 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 STK33Q9BYT3 514 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 ALDH8A1Q9H2A2 487 aaPredicted RBP7.4□□□□□ -1.22
COLCA1-205ENST00000620864 WHRNQ9P202 907 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 MROH7Q68CQ1 1323 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 E9PBE3 544 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 ZBTB39O15060 712 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 CLDN3O15551 220 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 ATP1A1P05023 1023 aaKnown RBP7.4□□□□□ -1.22
COLCA1-205ENST00000620864 RALAP11233 206 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 CPB1P15086 417 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 TCF4P15884 667 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 PRLRP16471 622 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 GPC3P51654 580 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 CDC42EP1Q00587 391 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 ITGADQ13349 1161 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 QPRTQ15274 297 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 C5orf22Q49AR2 442 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 OR6B3Q8NGW1 331 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 SYTL5Q8TDW5 730 aaPredicted RBP7.4□□□□□ -1.22
COLCA1-205ENST00000620864 CENPTQ96BT3 561 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 LRRC1Q9BTT6 524 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 RAVER2Q9HCJ3 691 aaKnown RBP7.4□□□□□ -1.22
COLCA1-205ENST00000620864 CD248Q9HCU0 757 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 METTL5Q9NRN9 209 aaKnown RBP7.4□□□□□ -1.22
COLCA1-205ENST00000620864 FAM196BA6NMK8 535 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 BMP10O95393 424 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 PABPC1P11940 636 aaKnown RBP7.4□□□□□ -1.22
COLCA1-205ENST00000620864 BMP3P12645 472 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 CCDC130P13994 396 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 S100GP29377 79 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 SLC16A2P36021 539 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 EXOSC10Q01780 885 aaKnown RBP7.4□□□□□ -1.22
COLCA1-205ENST00000620864 LRRC41Q15345 812 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 TCHHL1Q5QJ38 904 aaPredicted RBP7.4□□□□□ -1.22
COLCA1-205ENST00000620864 PRR23CQ6ZRP0 262 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 RAD54LQ92698 747 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 ZNF560Q96MR9 790 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 ZNF184Q99676 751 aaPredicted RBP7.4□□□□□ -1.22
COLCA1-205ENST00000620864 C6orf62Q9GZU0 229 aaPredicted RBP7.4□□□□□ -1.22
COLCA1-205ENST00000620864 GOLPH3Q9H4A6 298 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 TMEM51Q9NW97 253 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 KCND2Q9NZV8 630 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 AMACRQ9UHK6 382 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 CEP170BQ9Y4F5 1589 aaPredicted RBP7.4□□□□□ -1.22
COLCA1-205ENST00000620864 PDS5AQ29RF7 1337 aaKnown RBP7.4□□□□□ -1.22
COLCA1-205ENST00000620864 USP17L10C9JJH3 530 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 PGK2P07205 417 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 MAGEA4P43358 317 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 CDH6P55285 790 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 OTUD4Q01804 1114 aaKnown RBP7.4□□□□□ -1.22
COLCA1-205ENST00000620864 ZNF554Q86TJ5 538 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 SLC22A9Q8IVM8 553 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 AGPAT1Q99943 283 aa7.4□□□□□ -1.22
COLCA1-205ENST00000620864 PABPC3Q9H361 631 aaKnown RBP7.4□□□□□ -1.22
COLCA1-205ENST00000620864 TRIM49BA6NDI0 452 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 TRIM49D1C9J1S8 452 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 VIL1P09327 827 aaKnown RBP7.4□□□□□ -1.23
COLCA1-205ENST00000620864 ATP12AP54707 1039 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 ST8SIA6P61647 398 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 ZNF846Q147U1 533 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 DRAP1Q14919 205 aaPredicted RBP7.4□□□□□ -1.23
COLCA1-205ENST00000620864 NFIL3Q16649 462 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 TNFAIP8L3Q5GJ75 292 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms