RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 MBL2P11226 248 aaPredicted RBP18.18■□□□□ 0.5
HMGN3-203ENST00000620514 GTF2H1P32780 548 aa18.18■□□□□ 0.5
HMGN3-203ENST00000620514 PGFP49763 221 aa18.18■□□□□ 0.5
HMGN3-203ENST00000620514 AMPD2Q01433 879 aa18.18■□□□□ 0.5
HMGN3-203ENST00000620514 SRSF5Q13243 272 aaKnown RBP18.18■□□□□ 0.5
HMGN3-203ENST00000620514 LPAL2Q16609 132 aa18.18■□□□□ 0.5
HMGN3-203ENST00000620514 COBLL1Q53SF7 1204 aa18.18■□□□□ 0.5
HMGN3-203ENST00000620514 ISM2Q6H9L7 571 aa18.18■□□□□ 0.5
HMGN3-203ENST00000620514 FILIP1Q7Z7B0 1213 aa18.18■□□□□ 0.5
HMGN3-203ENST00000620514 PDZD8Q8NEN9 1154 aa18.18■□□□□ 0.5
HMGN3-203ENST00000620514 OVCA2Q8WZ82 227 aa18.18■□□□□ 0.5
HMGN3-203ENST00000620514 EZH1Q92800 747 aaPredicted RBP18.18■□□□□ 0.5
HMGN3-203ENST00000620514 JAKMIP2Q96AA8 810 aa18.18■□□□□ 0.5
HMGN3-203ENST00000620514 TIGD1Q96MW7 591 aa18.18■□□□□ 0.5
HMGN3-203ENST00000620514 CCSER2Q9H7U1 834 aa18.18■□□□□ 0.5
HMGN3-203ENST00000620514 CFAP97Q9P2B7 532 aa18.18■□□□□ 0.5
HMGN3-203ENST00000620514 HRO43593 1189 aa18.17■□□□□ 0.5
HMGN3-203ENST00000620514 CILPO75339 1184 aa18.17■□□□□ 0.5
HMGN3-203ENST00000620514 NFATC1O95644 943 aa18.17■□□□□ 0.5
HMGN3-203ENST00000620514 ZDHHC11BP0C7U3 371 aa18.17■□□□□ 0.5
HMGN3-203ENST00000620514 FAM200BP0CF97 657 aa18.17■□□□□ 0.5
HMGN3-203ENST00000620514 MXI1P50539 228 aa18.17■□□□□ 0.5
HMGN3-203ENST00000620514 GAB4Q2WGN9 574 aa18.17■□□□□ 0.5
HMGN3-203ENST00000620514 GPRIN1Q7Z2K8 1008 aa18.17■□□□□ 0.5
HMGN3-203ENST00000620514 ZC3H3Q8IXZ2 948 aaKnown RBP18.17■□□□□ 0.5
HMGN3-203ENST00000620514 CD101Q93033 1021 aa18.17■□□□□ 0.5
HMGN3-203ENST00000620514 CYFIP2Q96F07 1278 aa18.17■□□□□ 0.5
HMGN3-203ENST00000620514 HNRNPABQ99729 332 aaKnown RBP18.17■□□□□ 0.5
HMGN3-203ENST00000620514 TSG101Q99816 390 aa18.17■□□□□ 0.5
HMGN3-203ENST00000620514 NT5C1AQ9BXI3 368 aa18.17■□□□□ 0.5
HMGN3-203ENST00000620514 NCDNQ9UBB6 729 aa18.17■□□□□ 0.5
HMGN3-203ENST00000620514 ATG2BQ96BY7 2078 aa18.17■□□□□ 0.5
HMGN3-203ENST00000620514 ZNF292O60281 2723 aa18.17■□□□□ 0.5
HMGN3-203ENST00000620514 FAM92AA1XBS5 289 aa18.16■□□□□ 0.5
HMGN3-203ENST00000620514 GADD45BO75293 160 aaPredicted RBP18.16■□□□□ 0.5
HMGN3-203ENST00000620514 CYP17A1P05093 508 aa18.16■□□□□ 0.5
HMGN3-203ENST00000620514 DRD1P21728 446 aa18.16■□□□□ 0.5
HMGN3-203ENST00000620514 NR1H3Q13133 447 aa18.16■□□□□ 0.5
HMGN3-203ENST00000620514 CBWD6Q4V339 395 aa18.16■□□□□ 0.5
HMGN3-203ENST00000620514 ZNF394Q53GI3 561 aa18.16■□□□□ 0.5
HMGN3-203ENST00000620514 DCAF17Q5H9S7 520 aaPredicted RBP18.16■□□□□ 0.5
HMGN3-203ENST00000620514 CBWD3Q5JTY5 395 aa18.16■□□□□ 0.5
HMGN3-203ENST00000620514 CBWD5Q5RIA9 395 aa18.16■□□□□ 0.5
HMGN3-203ENST00000620514 HECTD3Q5T447 861 aa18.16■□□□□ 0.5
HMGN3-203ENST00000620514 SNX30Q5VWJ9 437 aa18.16■□□□□ 0.5
HMGN3-203ENST00000620514 CLEC20AQ6ZU45 233 aa18.16■□□□□ 0.5
HMGN3-203ENST00000620514 CCDC150Q8NCX0 1101 aa18.16■□□□□ 0.5
HMGN3-203ENST00000620514 FBXL13Q8NEE6 735 aa18.16■□□□□ 0.5
HMGN3-203ENST00000620514 TATDN2Q93075 761 aa18.16■□□□□ 0.5
HMGN3-203ENST00000620514 ZFRQ96KR1 1074 aaKnown RBP18.16■□□□□ 0.5
HMGN3-203ENST00000620514 ARID3AQ99856 593 aa18.16■□□□□ 0.5
HMGN3-203ENST00000620514 COMMD8Q9NX08 183 aa18.16■□□□□ 0.5
HMGN3-203ENST00000620514 RAB20Q9NX57 234 aa18.16■□□□□ 0.5
HMGN3-203ENST00000620514 WDR87Q6ZQQ6 2873 aa18.16■□□□□ 0.5
HMGN3-203ENST00000620514 SPTBN4Q9H254 2564 aa18.15■□□□□ 0.5
HMGN3-203ENST00000620514 ANTXRLA6NF34 631 aa18.15■□□□□ 0.5
HMGN3-203ENST00000620514 HHLA1C9JL84 531 aa18.15■□□□□ 0.5
HMGN3-203ENST00000620514 SLC16A3O15427 465 aaKnown RBP18.15■□□□□ 0.5
HMGN3-203ENST00000620514 CD44P16070 742 aaKnown RBP18.15■□□□□ 0.5
HMGN3-203ENST00000620514 OPRD1P41143 372 aa18.15■□□□□ 0.5
HMGN3-203ENST00000620514 PXNP49023 591 aaPredicted RBP18.15■□□□□ 0.5
HMGN3-203ENST00000620514 FKBP3Q00688 224 aaKnown RBP18.15■□□□□ 0.5
HMGN3-203ENST00000620514 TCERG1LQ5VWI1 586 aa18.15■□□□□ 0.5
HMGN3-203ENST00000620514 LONP2Q86WA8 852 aa18.15■□□□□ 0.5
HMGN3-203ENST00000620514 ADGRG2Q8IZP9 1017 aa18.15■□□□□ 0.5
HMGN3-203ENST00000620514 WBP2Q969T9 261 aa18.15■□□□□ 0.5
HMGN3-203ENST00000620514 MAN1B1Q9UKM7 699 aa18.15■□□□□ 0.5
HMGN3-203ENST00000620514 MYH10P35580 1976 aa18.15■□□□□ 0.5
HMGN3-203ENST00000620514 STX10O60499 249 aa18.14■□□□□ 0.49
HMGN3-203ENST00000620514 DHCR24Q15392 516 aa18.14■□□□□ 0.49
HMGN3-203ENST00000620514 PPP1R26Q5T8A7 1209 aaPredicted RBP18.14■□□□□ 0.49
HMGN3-203ENST00000620514 PRR23BQ6ZRT6 265 aa18.14■□□□□ 0.49
HMGN3-203ENST00000620514 DDX42Q86XP3 938 aaKnown RBP eCLIP18.14■□□□□ 0.49
HMGN3-203ENST00000620514 KIAA1958Q8N8K9 716 aa18.14■□□□□ 0.49
HMGN3-203ENST00000620514 RPLP0P6Q8NHW5 317 aa18.14■□□□□ 0.49
HMGN3-203ENST00000620514 FBXO44Q9H4M3 255 aa18.14■□□□□ 0.49
HMGN3-203ENST00000620514 CISHQ9NSE2 258 aa18.14■□□□□ 0.49
HMGN3-203ENST00000620514 HOOK1Q9UJC3 728 aaKnown RBP18.14■□□□□ 0.49
HMGN3-203ENST00000620514 SLC9A3R1O14745 358 aaPredicted RBP18.13■□□□□ 0.49
HMGN3-203ENST00000620514 CYP26A1O43174 497 aa18.13■□□□□ 0.49
HMGN3-203ENST00000620514 ATG13O75143 517 aa18.13■□□□□ 0.49
HMGN3-203ENST00000620514 TBX18O95935 607 aa18.13■□□□□ 0.49
HMGN3-203ENST00000620514 IRF1P10914 325 aa18.13■□□□□ 0.49
HMGN3-203ENST00000620514 TRIM21P19474 475 aaKnown RBP18.13■□□□□ 0.49
HMGN3-203ENST00000620514 ACO1P21399 889 aaKnown RBP18.13■□□□□ 0.49
HMGN3-203ENST00000620514 BMP6P22004 513 aa18.13■□□□□ 0.49
HMGN3-203ENST00000620514 HOXA6P31267 233 aa18.13■□□□□ 0.49
HMGN3-203ENST00000620514 ID4P47928 161 aa18.13■□□□□ 0.49
HMGN3-203ENST00000620514 SLC6A11P48066 632 aa18.13■□□□□ 0.49
HMGN3-203ENST00000620514 TUBP50607 506 aa18.13■□□□□ 0.49
HMGN3-203ENST00000620514 LRRC63Q05C16 580 aa18.13■□□□□ 0.49
HMGN3-203ENST00000620514 SIM2Q14190 667 aaPredicted RBP18.13■□□□□ 0.49
HMGN3-203ENST00000620514 FBXO43Q4G163 708 aa18.13■□□□□ 0.49
HMGN3-203ENST00000620514 RHBDF2Q6PJF5 856 aa18.13■□□□□ 0.49
HMGN3-203ENST00000620514 WDR5BQ86VZ2 330 aa18.13■□□□□ 0.49
HMGN3-203ENST00000620514 ELOA2Q8IYF1 753 aaPredicted RBP18.13■□□□□ 0.49
HMGN3-203ENST00000620514 EXOC4Q96A65 974 aa18.13■□□□□ 0.49
HMGN3-203ENST00000620514 HEXIM2Q96MH2 286 aaKnown RBP18.13■□□□□ 0.49
HMGN3-203ENST00000620514 NMUR1Q9HB89 426 aa18.13■□□□□ 0.49
HMGN3-203ENST00000620514 OSER1Q9NX31 292 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms