RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 PARD3BQ8TEW8 1205 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 LBHD1Q9BQE6 289 aaPredicted RBP10.61□□□□□ -0.71
CUL4A-212ENST00000617546 TBX20Q9UMR3 447 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 REXO2Q9Y3B8 237 aaKnown RBP10.61□□□□□ -0.71
CUL4A-212ENST00000617546 SHPRHQ149N8 1683 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 MYOM1P52179 1685 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 RPS6KA4O75676 772 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 AKAP3O75969 853 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 TCN1P20061 433 aaPredicted RBP10.61□□□□□ -0.71
CUL4A-212ENST00000617546 SP100P23497 879 aaPredicted RBP10.61□□□□□ -0.71
CUL4A-212ENST00000617546 ERFP50548 548 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 GCNT1Q02742 428 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 ZC2HC1CQ53FD0 456 aaPredicted RBP10.61□□□□□ -0.71
CUL4A-212ENST00000617546 SPDYAQ5MJ70 313 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 GPAT2Q6NUI2 795 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 SEPT1Q8WYJ6 367 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 BTBD9Q96Q07 612 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 ASB2Q96Q27 587 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 FAM217BQ9NTX9 383 aaPredicted RBP10.61□□□□□ -0.71
CUL4A-212ENST00000617546 RAB26Q9ULW5 256 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 A0A087X0B3 334 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 ANXA9O76027 345 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 CCDC130P13994 396 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 ZNF23P17027 643 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 ZC3H12BQ5HYM0 836 aaKnown RBP10.61□□□□□ -0.71
CUL4A-212ENST00000617546 BBS7Q8IWZ6 715 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 NUP93Q8N1F7 819 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 THEM5Q8N1Q8 247 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 CCDC24Q8N4L8 307 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 MXRA8Q9BRK3 442 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 PTTG2Q9NZH5 202 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 ADAM30Q9UKF2 790 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 CROTQ9UKG9 612 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 PCDHGB4Q9UN71 923 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 SLC12A4Q9UP95 1085 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 TPRKBQ9Y3C4 175 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 PRR23AA6NEV1 266 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 TMEM114B3SHH9 223 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 AGPSO00116 658 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 SLC37A4O43826 429 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 CYP1A2P05177 515 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 VIL1P09327 827 aaKnown RBP10.61□□□□□ -0.71
CUL4A-212ENST00000617546 VCAM1P19320 739 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 PTGER2P43116 358 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 LIN52Q52LA3 116 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 HABP4Q5JVS0 413 aaKnown RBP10.61□□□□□ -0.71
CUL4A-212ENST00000617546 PIGWQ7Z7B1 504 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 DKK3Q9UBP4 350 aa10.61□□□□□ -0.71
CUL4A-212ENST00000617546 CLOCKO15516 846 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 SMNDC1O75940 238 aaKnown RBP eCLIP10.6□□□□□ -0.71
CUL4A-212ENST00000617546 OSTNP61366 133 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 TBCELQ5QJ74 424 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 SWSAP1Q6NVH7 229 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 ZNF720Q7Z2F6 126 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 ADCY4Q8NFM4 1077 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 NDEL1Q9GZM8 345 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 EBF2Q9HAK2 575 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 FAM25AB3EWG3 89 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 FAM25CB3EWG5 89 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 FAM25GB3EWG6 89 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 GAS2O43903 313 aaKnown RBP10.6□□□□□ -0.71
CUL4A-212ENST00000617546 SULT1E1P49888 294 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 NAA20P61599 178 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 BNC1Q01954 994 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 DHRSXQ8N5I4 330 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 C19orf60Q96EN9 201 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 FAM193BQ96PV7 902 aaPredicted RBP10.6□□□□□ -0.71
CUL4A-212ENST00000617546 FAM32AQ9Y421 112 aaKnown RBP10.6□□□□□ -0.71
CUL4A-212ENST00000617546 RAD54BQ9Y620 910 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 PIK3C2BO00750 1634 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 SPDYE2BA6NHP3 402 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 DGKIO75912 1065 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 SHBGP04278 402 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 SPDYE6P0CI01 402 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 SREBF1P36956 1147 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 DEPDC1Q5TB30 811 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 ZNF513Q8N8E2 541 aaPredicted RBP10.6□□□□□ -0.71
CUL4A-212ENST00000617546 ITFG2Q969R8 447 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 TBCBQ99426 244 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 C17orf80Q9BSJ5 609 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 WDR12Q9GZL7 423 aaKnown RBP10.6□□□□□ -0.71
CUL4A-212ENST00000617546 COMMD8Q9NX08 183 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 TRIM13O60858 407 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 PDE9AO76083 593 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 GJB6O95452 261 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 POLD1P28340 1107 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 ZNF846Q147U1 533 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 QPCTQ16769 361 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 SPANXN3Q5MJ09 141 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 FAM13CQ8NE31 585 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 KAT2BQ92831 832 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 SLC35C1Q96A29 364 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 ZNF669Q96BR6 464 aaPredicted RBP10.6□□□□□ -0.71
CUL4A-212ENST00000617546 NLRP4Q96MN2 994 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 CPNE1Q99829 537 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 SLC25A23Q9BV35 468 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 ENOPH1Q9UHY7 261 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 ADAM28Q9UKQ2 775 aa10.6□□□□□ -0.71
CUL4A-212ENST00000617546 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.6□□□□□ -0.71
CUL4A-212ENST00000617546 MROH1Q8NDA8 1641 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms