RNA–Protein interactions for RNA: ENST00000613217.4

NCAM1-220, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 3

Gene NCAM1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-220ENST00000613217 ADAM33Q9BZ11 813 aa13.12□□□□□ -0.31
NCAM1-220ENST00000613217 FBXO44Q9H4M3 255 aa13.12□□□□□ -0.31
NCAM1-220ENST00000613217 HOXC11O43248 304 aaPredicted RBP13.11□□□□□ -0.31
NCAM1-220ENST00000613217 CLSTN1O94985 981 aa13.11□□□□□ -0.31
NCAM1-220ENST00000613217 CD2BP2O95400 341 aaKnown RBP13.11□□□□□ -0.31
NCAM1-220ENST00000613217 SYPP08247 313 aa13.11□□□□□ -0.31
NCAM1-220ENST00000613217 TIE1P35590 1138 aa13.11□□□□□ -0.31
NCAM1-220ENST00000613217 USP46P62068 366 aa13.11□□□□□ -0.31
NCAM1-220ENST00000613217 ASIC1P78348 528 aa13.11□□□□□ -0.31
NCAM1-220ENST00000613217 IRX4P78413 519 aa13.11□□□□□ -0.31
NCAM1-220ENST00000613217 CEBPZQ03701 1054 aaKnown RBP13.11□□□□□ -0.31
NCAM1-220ENST00000613217 GFPT1Q06210 699 aaPredicted RBP13.11□□□□□ -0.31
NCAM1-220ENST00000613217 STK38Q15208 465 aa13.11□□□□□ -0.31
NCAM1-220ENST00000613217 UAP1L1Q3KQV9 507 aa13.11□□□□□ -0.31
NCAM1-220ENST00000613217 FAM26FQ5R3K3 315 aa13.11□□□□□ -0.31
NCAM1-220ENST00000613217 RHBDF2Q6PJF5 856 aa13.11□□□□□ -0.31
NCAM1-220ENST00000613217 ZSWIM2Q8NEG5 633 aa13.11□□□□□ -0.31
NCAM1-220ENST00000613217 ZNF507Q8TCN5 953 aa13.11□□□□□ -0.31
NCAM1-220ENST00000613217 SMARCD1Q96GM5 515 aa13.11□□□□□ -0.31
NCAM1-220ENST00000613217 ZNF396Q96N95 335 aaPredicted RBP13.11□□□□□ -0.31
NCAM1-220ENST00000613217 XPO6Q96QU8 1125 aaKnown RBP13.11□□□□□ -0.31
NCAM1-220ENST00000613217 TRIM9Q9C026 710 aa13.11□□□□□ -0.31
NCAM1-220ENST00000613217 RNF38Q9H0F5 515 aa13.11□□□□□ -0.31
NCAM1-220ENST00000613217 VRTNQ9H8Y1 702 aa13.11□□□□□ -0.31
NCAM1-220ENST00000613217 DMAP1Q9NPF5 467 aaPredicted RBP13.11□□□□□ -0.31
NCAM1-220ENST00000613217 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.11□□□□□ -0.31
NCAM1-220ENST00000613217 KBTBD4Q9NVX7 518 aa13.11□□□□□ -0.31
NCAM1-220ENST00000613217 POLR3BQ9NW08 1133 aaPredicted RBP13.11□□□□□ -0.31
NCAM1-220ENST00000613217 SMPD4Q9NXE4 827 aa13.11□□□□□ -0.31
NCAM1-220ENST00000613217 LSM7Q9UK45 103 aaKnown RBP13.11□□□□□ -0.31
NCAM1-220ENST00000613217 INVSQ9Y283 1065 aa13.11□□□□□ -0.31
NCAM1-220ENST00000613217 ATG2BQ96BY7 2078 aa13.1□□□□□ -0.31
NCAM1-220ENST00000613217 TCRBV21S2A2A0A5A6 115 aa13.1□□□□□ -0.31
NCAM1-220ENST00000613217 CDX4O14627 284 aaPredicted RBP13.1□□□□□ -0.31
NCAM1-220ENST00000613217 PPP6R2O75170 966 aa13.1□□□□□ -0.31
NCAM1-220ENST00000613217 SYT1P21579 422 aa13.1□□□□□ -0.31
NCAM1-220ENST00000613217 BCKDHBP21953 392 aa13.1□□□□□ -0.31
NCAM1-220ENST00000613217 KIR2DL1P43626 348 aaPredicted RBP13.1□□□□□ -0.31
NCAM1-220ENST00000613217 CYP24A1Q07973 514 aa13.1□□□□□ -0.31
NCAM1-220ENST00000613217 LY6G5CQ5SRR4 150 aa13.1□□□□□ -0.31
NCAM1-220ENST00000613217 TADA2BQ86TJ2 420 aa13.1□□□□□ -0.31
NCAM1-220ENST00000613217 C12orf56Q8IXR9 622 aa13.1□□□□□ -0.31
NCAM1-220ENST00000613217 PDILTQ8N807 584 aa13.1□□□□□ -0.31
NCAM1-220ENST00000613217 ZNF513Q8N8E2 541 aaPredicted RBP13.1□□□□□ -0.31
NCAM1-220ENST00000613217 HMGB4Q8WW32 186 aa13.1□□□□□ -0.31
NCAM1-220ENST00000613217 CCDC127Q96BQ5 260 aa13.1□□□□□ -0.31
NCAM1-220ENST00000613217 MRPL45Q9BRJ2 306 aaKnown RBP13.1□□□□□ -0.31
NCAM1-220ENST00000613217 MED10Q9BTT4 135 aa13.1□□□□□ -0.31
NCAM1-220ENST00000613217 PANK2Q9BZ23 570 aa13.1□□□□□ -0.31
NCAM1-220ENST00000613217 FAM124BQ9H5Z6 455 aaPredicted RBP13.1□□□□□ -0.31
NCAM1-220ENST00000613217 AGPAT3Q9NRZ7 376 aa13.1□□□□□ -0.31
NCAM1-220ENST00000613217 WDR35Q9P2L0 1181 aa13.1□□□□□ -0.31
NCAM1-220ENST00000613217 SUSD2Q9UGT4 822 aa13.1□□□□□ -0.31
NCAM1-220ENST00000613217 SLC6A14Q9UN76 642 aa13.1□□□□□ -0.31
NCAM1-220ENST00000613217 NEUROG3Q9Y4Z2 214 aa13.1□□□□□ -0.31
NCAM1-220ENST00000613217 EML5Q05BV3 1969 aa13.1□□□□□ -0.31
NCAM1-220ENST00000613217 HELZP42694 1942 aaKnown RBP13.09□□□□□ -0.31
NCAM1-220ENST00000613217 SGK1O00141 431 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 HCRTO43612 131 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 OPHN1O60890 802 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 CFIP05156 583 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 GNSP15586 552 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 ENGP17813 658 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 LAMA1P25391 3075 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 NTSR1P30989 418 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 NASPP49321 788 aaPredicted RBP13.09□□□□□ -0.31
NCAM1-220ENST00000613217 ZXDBP98169 803 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 RPL6Q02878 288 aaKnown RBP13.09□□□□□ -0.31
NCAM1-220ENST00000613217 IFRD2Q12894 506 aaPredicted RBP13.09□□□□□ -0.31
NCAM1-220ENST00000613217 BIRC3Q13489 604 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 CCDC142Q17RM4 750 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 GAB4Q2WGN9 574 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 ANO4Q32M45 955 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 MAP7D1Q3KQU3 841 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 ZNF667Q5HYK9 610 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 SYCP2LQ5T4T6 812 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 PEAR1Q5VY43 1037 aaPredicted RBP13.09□□□□□ -0.31
NCAM1-220ENST00000613217 TMEM92Q6UXU6 159 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 RDH13Q8NBN7 331 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 ZNF518BQ9C0D4 1074 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 TLR8Q9NR97 1041 aaKnown RBP13.09□□□□□ -0.31
NCAM1-220ENST00000613217 SPHK2Q9NRA0 654 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 NXF1Q9UBU9 619 aaKnown RBP13.09□□□□□ -0.31
NCAM1-220ENST00000613217 PILRBQ9UKJ0 227 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 ZMIZ1Q9ULJ6 1067 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 STARD13Q9Y3M8 1113 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 ANAPC1Q9H1A4 1944 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 PTPRJQ12913 1337 aa13.09□□□□□ -0.31
NCAM1-220ENST00000613217 CFAP47Q6ZTR5 3102 aa13.08□□□□□ -0.32
NCAM1-220ENST00000613217 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.08□□□□□ -0.32
NCAM1-220ENST00000613217 PVALEFA0A1B0GWK0 134 aa13.08□□□□□ -0.32
NCAM1-220ENST00000613217 NPC1O15118 1278 aa13.08□□□□□ -0.32
NCAM1-220ENST00000613217 SPTLC2O15270 562 aa13.08□□□□□ -0.32
NCAM1-220ENST00000613217 COCHO43405 550 aa13.08□□□□□ -0.32
NCAM1-220ENST00000613217 EXOC3O60645 756 aa13.08□□□□□ -0.32
NCAM1-220ENST00000613217 CST3P01034 146 aaPredicted RBP13.08□□□□□ -0.32
NCAM1-220ENST00000613217 RPN1P04843 607 aaKnown RBP13.08□□□□□ -0.32
NCAM1-220ENST00000613217 SERPINF2P08697 491 aa13.08□□□□□ -0.32
NCAM1-220ENST00000613217 HOXB2P14652 356 aa13.08□□□□□ -0.32
NCAM1-220ENST00000613217 CYP2J2P51589 502 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms