RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 EFCAB3Q8N7B9 438 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 PPP1R14CQ8TAE6 165 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 SHKBP1Q8TBC3 707 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 ATXN7L3BQ96GX2 97 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 ANKRD36BP1Q96IX9 119 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 FOXP3Q9BZS1 431 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 TAS2R1Q9NYW7 299 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 ZC3H7BQ9UGR2 993 aaKnown RBP14.65□□□□□ -0.06
COL6A1-207ENST00000612273 MAFBQ9Y5Q3 323 aaPredicted RBP14.65□□□□□ -0.06
COL6A1-207ENST00000612273 ADGRA2Q96PE1 1338 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 TCRBV5S1A1TA0A578 114 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 ATP5HO75947 161 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 HMGCRP04035 888 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 SKIV2L2P42285 1042 aaKnown RBP14.65□□□□□ -0.06
COL6A1-207ENST00000612273 PHKA2P46019 1235 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 CHI3L2Q15782 390 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 TMEM154Q6P9G4 183 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 C4orf50Q6ZRC1 276 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 BBS12Q6ZW61 710 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 C7orf31Q8N865 590 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 MAB21L3Q8N8X9 362 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 RXFP2Q8WXD0 754 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 B3GNT5Q9BYG0 378 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 ACSS2Q9NR19 701 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 NMRK1Q9NWW6 199 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 STK32BQ9NY57 414 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 STYXL1Q9Y6J8 313 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 EME2A4GXA9 379 aaPredicted RBP14.65□□□□□ -0.06
COL6A1-207ENST00000612273 AMPD1P23109 780 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 RTP1P59025 263 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 YWHAEP62258 255 aaKnown RBP14.65□□□□□ -0.06
COL6A1-207ENST00000612273 CCDC15Q0P6D6 951 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 RASA2Q15283 850 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 XYLT1Q86Y38 959 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 ZBTB8OSQ8IWT0 167 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 SCUBE3Q8IX30 993 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 CFAP61Q8NHU2 1237 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 AGR3Q8TD06 166 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 NSL1Q96IY1 281 aa14.65□□□□□ -0.06
COL6A1-207ENST00000612273 ACO2Q99798 780 aaKnown RBP14.65□□□□□ -0.06
COL6A1-207ENST00000612273 IQANK1A0A1B0GTG1 560 aa14.64□□□□□ -0.07
COL6A1-207ENST00000612273 SIGLEC16A6NMB1 481 aa14.64□□□□□ -0.07
COL6A1-207ENST00000612273 SPDYE16A6NNV3 312 aaPredicted RBP14.64□□□□□ -0.07
COL6A1-207ENST00000612273 GSC2O15499 205 aa14.64□□□□□ -0.07
COL6A1-207ENST00000612273 KIF1CO43896 1103 aaKnown RBP14.64□□□□□ -0.07
COL6A1-207ENST00000612273 CCDC22O60826 627 aa14.64□□□□□ -0.07
COL6A1-207ENST00000612273 MICAL2O94851 1124 aa14.64□□□□□ -0.07
COL6A1-207ENST00000612273 HOXC6P09630 235 aa14.64□□□□□ -0.07
COL6A1-207ENST00000612273 GNAZP19086 355 aa14.64□□□□□ -0.07
COL6A1-207ENST00000612273 EIF4BP23588 611 aaKnown RBP14.64□□□□□ -0.07
COL6A1-207ENST00000612273 PGM1P36871 562 aa14.64□□□□□ -0.07
COL6A1-207ENST00000612273 CA9Q16790 459 aa14.64□□□□□ -0.07
COL6A1-207ENST00000612273 PARP6Q2NL67 630 aa14.64□□□□□ -0.07
COL6A1-207ENST00000612273 PPP1R15BQ5SWA1 713 aa14.64□□□□□ -0.07
COL6A1-207ENST00000612273 ATF7IP2Q5U623 682 aa14.64□□□□□ -0.07
COL6A1-207ENST00000612273 POU5F2Q8N7G0 328 aa14.64□□□□□ -0.07
COL6A1-207ENST00000612273 THTPAQ9BU02 230 aa14.64□□□□□ -0.07
COL6A1-207ENST00000612273 ELOVL4Q9GZR5 314 aa14.64□□□□□ -0.07
COL6A1-207ENST00000612273 XYLT2Q9H1B5 865 aa14.64□□□□□ -0.07
COL6A1-207ENST00000612273 MYO18AQ92614 2054 aaKnown RBP14.64□□□□□ -0.07
COL6A1-207ENST00000612273 PRPSAP2O60256 369 aa14.64□□□□□ -0.07
COL6A1-207ENST00000612273 SMNDC1O75940 238 aaKnown RBP eCLIP14.64□□□□□ -0.07
COL6A1-207ENST00000612273 ZBED1O96006 694 aa14.64□□□□□ -0.07
COL6A1-207ENST00000612273 RFC5P40937 340 aa14.64□□□□□ -0.07
COL6A1-207ENST00000612273 BST1Q10588 318 aa14.64□□□□□ -0.07
COL6A1-207ENST00000612273 TREML2Q5T2D2 321 aa14.64□□□□□ -0.07
COL6A1-207ENST00000612273 TEX2Q8IWB9 1127 aa14.64□□□□□ -0.07
COL6A1-207ENST00000612273 MPP5Q8N3R9 675 aa14.64□□□□□ -0.07
COL6A1-207ENST00000612273 CCDC124Q96CT7 223 aaKnown RBP14.64□□□□□ -0.07
COL6A1-207ENST00000612273 BTBD10Q9BSF8 475 aa14.64□□□□□ -0.07
COL6A1-207ENST00000612273 MAP3K20Q9NYL2 800 aaKnown RBP14.64□□□□□ -0.07
COL6A1-207ENST00000612273 NVLO15381 856 aaKnown RBP14.63□□□□□ -0.07
COL6A1-207ENST00000612273 TBX10O75333 385 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 FARP2O94887 1054 aaPredicted RBP14.63□□□□□ -0.07
COL6A1-207ENST00000612273 ZBTB7AO95365 584 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 ARIH2O95376 493 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 UBTFL6P0CB48 400 aaPredicted RBP14.63□□□□□ -0.07
COL6A1-207ENST00000612273 CTC1Q2NKJ3 1217 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 LRRC38Q5VT99 294 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 DRICH1Q6PGQ1 229 aaPredicted RBP14.63□□□□□ -0.07
COL6A1-207ENST00000612273 PCGF5Q86SE9 256 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 LMNTD2Q8IXW0 634 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 NDUFAF2Q8N183 169 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 ZNF276Q8N554 614 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 REPS2Q8NFH8 660 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 USP6NLQ92738 828 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 INPP5DQ92835 1189 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 SYT15Q9BQS2 421 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 RPF1Q9H9Y2 349 aaKnown RBP14.63□□□□□ -0.07
COL6A1-207ENST00000612273 ZFATQ9P243 1243 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.63□□□□□ -0.07
COL6A1-207ENST00000612273 HCRTO43612 131 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 USP1O94782 785 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 TFE3P19532 575 aaPredicted RBP14.63□□□□□ -0.07
COL6A1-207ENST00000612273 AQP5P55064 265 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 BCAR1P56945 870 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 PTPN11Q06124 597 aaPredicted RBP14.63□□□□□ -0.07
COL6A1-207ENST00000612273 TSNAXIP1Q2TAA8 658 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 CES3Q6UWW8 571 aa14.63□□□□□ -0.07
COL6A1-207ENST00000612273 C1orf127Q8N9H9 656 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms