RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 STX17P56962 302 aa14.17□□□□□ -0.14
CTSA-213ENST00000606782 TAF10Q12962 218 aa14.17□□□□□ -0.14
CTSA-213ENST00000606782 NR1H3Q13133 447 aa14.17□□□□□ -0.14
CTSA-213ENST00000606782 SNX30Q5VWJ9 437 aa14.17□□□□□ -0.14
CTSA-213ENST00000606782 PKN3Q6P5Z2 889 aa14.17□□□□□ -0.14
CTSA-213ENST00000606782 C11orf57Q6ZUT1 292 aaPredicted RBP14.17□□□□□ -0.14
CTSA-213ENST00000606782 FILIP1Q7Z7B0 1213 aa14.17□□□□□ -0.14
CTSA-213ENST00000606782 WDR5BQ86VZ2 330 aa14.17□□□□□ -0.14
CTSA-213ENST00000606782 NUP93Q8N1F7 819 aa14.17□□□□□ -0.14
CTSA-213ENST00000606782 CRYBG2Q8N1P7 616 aa14.17□□□□□ -0.14
CTSA-213ENST00000606782 ENOX1Q8TC92 643 aaKnown RBP14.17□□□□□ -0.14
CTSA-213ENST00000606782 OVCA2Q8WZ82 227 aa14.17□□□□□ -0.14
CTSA-213ENST00000606782 TNIP3Q96KP6 325 aa14.17□□□□□ -0.14
CTSA-213ENST00000606782 SLITRK1Q96PX8 696 aa14.17□□□□□ -0.14
CTSA-213ENST00000606782 P2RY13Q9BPV8 354 aa14.17□□□□□ -0.14
CTSA-213ENST00000606782 RNF38Q9H0F5 515 aa14.17□□□□□ -0.14
CTSA-213ENST00000606782 SDCBP2Q9H190 292 aa14.17□□□□□ -0.14
CTSA-213ENST00000606782 LINC00597Q9H2U6 94 aa14.17□□□□□ -0.14
CTSA-213ENST00000606782 COMMD8Q9NX08 183 aa14.17□□□□□ -0.14
CTSA-213ENST00000606782 CTNND2Q9UQB3 1225 aa14.17□□□□□ -0.14
CTSA-213ENST00000606782 FRMD4BQ9Y2L6 1034 aa14.17□□□□□ -0.14
CTSA-213ENST00000606782 WNT6Q9Y6F9 365 aa14.17□□□□□ -0.14
CTSA-213ENST00000606782 HELZP42694 1942 aaKnown RBP14.17□□□□□ -0.14
CTSA-213ENST00000606782 NCOR2Q9Y618 2525 aa14.16□□□□□ -0.14
CTSA-213ENST00000606782 ATG2BQ96BY7 2078 aa14.16□□□□□ -0.14
CTSA-213ENST00000606782 LEFTY2O00292 366 aa14.16□□□□□ -0.14
CTSA-213ENST00000606782 CLDN5O00501 218 aa14.16□□□□□ -0.14
CTSA-213ENST00000606782 LRP3O75074 770 aa14.16□□□□□ -0.14
CTSA-213ENST00000606782 AKAP3O75969 853 aa14.16□□□□□ -0.14
CTSA-213ENST00000606782 RTN3O95197 1032 aaPredicted RBP14.16□□□□□ -0.14
CTSA-213ENST00000606782 EGFP01133 1207 aa14.16□□□□□ -0.14
CTSA-213ENST00000606782 RETP07949 1114 aa14.16□□□□□ -0.14
CTSA-213ENST00000606782 P4HA1P13674 534 aa14.16□□□□□ -0.14
CTSA-213ENST00000606782 YWHAQP27348 245 aa14.16□□□□□ -0.14
CTSA-213ENST00000606782 PSMC2P35998 433 aaKnown RBP14.16□□□□□ -0.14
CTSA-213ENST00000606782 PUM1Q14671 1186 aaKnown RBP eCLIP14.16□□□□□ -0.14
CTSA-213ENST00000606782 ANO6Q4KMQ2 910 aa14.16□□□□□ -0.14
CTSA-213ENST00000606782 UNC93AQ86WB7 457 aa14.16□□□□□ -0.14
CTSA-213ENST00000606782 FUKQ8N0W3 1084 aa14.16□□□□□ -0.14
CTSA-213ENST00000606782 EZH1Q92800 747 aaPredicted RBP14.16□□□□□ -0.14
CTSA-213ENST00000606782 CEP63Q96MT8 703 aa14.16□□□□□ -0.14
CTSA-213ENST00000606782 BPIFA3Q9BQP9 254 aa14.16□□□□□ -0.14
CTSA-213ENST00000606782 SRRTQ9BXP5 876 aaKnown RBP14.16□□□□□ -0.14
CTSA-213ENST00000606782 GMEB2Q9UKD1 530 aa14.16□□□□□ -0.14
CTSA-213ENST00000606782 RAB23Q9ULC3 237 aa14.16□□□□□ -0.14
CTSA-213ENST00000606782 SDK1Q7Z5N4 2213 aa14.16□□□□□ -0.14
CTSA-213ENST00000606782 ATP8B3O60423 1300 aa14.15□□□□□ -0.14
CTSA-213ENST00000606782 SPTBN2O15020 2390 aa14.15□□□□□ -0.14
CTSA-213ENST00000606782 PRR5-ARHGAP8B1AHC4 643 aa14.15□□□□□ -0.14
CTSA-213ENST00000606782 NFATC1O95644 943 aa14.15□□□□□ -0.14
CTSA-213ENST00000606782 CAVIN2O95810 425 aa14.15□□□□□ -0.14
CTSA-213ENST00000606782 ZDHHC11BP0C7U3 371 aa14.15□□□□□ -0.14
CTSA-213ENST00000606782 SDHBP21912 280 aa14.15□□□□□ -0.14
CTSA-213ENST00000606782 ASPAP45381 313 aa14.15□□□□□ -0.14
CTSA-213ENST00000606782 VAMP7P51809 220 aa14.15□□□□□ -0.14
CTSA-213ENST00000606782 ZNF445P59923 1031 aa14.15□□□□□ -0.14
CTSA-213ENST00000606782 ARHGAP8P85298 464 aa14.15□□□□□ -0.14
CTSA-213ENST00000606782 SIM2Q14190 667 aaPredicted RBP14.15□□□□□ -0.14
CTSA-213ENST00000606782 GAB4Q2WGN9 574 aa14.15□□□□□ -0.14
CTSA-213ENST00000606782 CEP135Q66GS9 1140 aa14.15□□□□□ -0.14
CTSA-213ENST00000606782 NAIF1Q69YI7 327 aaPredicted RBP14.15□□□□□ -0.14
CTSA-213ENST00000606782 LRSAM1Q6UWE0 723 aa14.15□□□□□ -0.14
CTSA-213ENST00000606782 INTS8Q75QN2 995 aaKnown RBP14.15□□□□□ -0.14
CTSA-213ENST00000606782 FAM35AQ86V20 835 aa14.15□□□□□ -0.14
CTSA-213ENST00000606782 ADGRG2Q8IZP9 1017 aa14.15□□□□□ -0.14
CTSA-213ENST00000606782 CAMKK1Q8N5S9 505 aa14.15□□□□□ -0.14
CTSA-213ENST00000606782 PDZD8Q8NEN9 1154 aa14.15□□□□□ -0.14
CTSA-213ENST00000606782 CD101Q93033 1021 aa14.15□□□□□ -0.14
CTSA-213ENST00000606782 SMARCD1Q96GM5 515 aa14.15□□□□□ -0.14
CTSA-213ENST00000606782 KCNK16Q96T55 309 aa14.15□□□□□ -0.14
CTSA-213ENST00000606782 CSNK1G1Q9HCP0 422 aa14.15□□□□□ -0.14
CTSA-213ENST00000606782 PARD6AQ9NPB6 346 aa14.15□□□□□ -0.14
CTSA-213ENST00000606782 DMAP1Q9NPF5 467 aaPredicted RBP14.15□□□□□ -0.14
CTSA-213ENST00000606782 SPAG17Q6Q759 2223 aa14.15□□□□□ -0.14
CTSA-213ENST00000606782 SLC9A3R1O14745 358 aaPredicted RBP14.14□□□□□ -0.15
CTSA-213ENST00000606782 SLC16A3O15427 465 aaKnown RBP14.14□□□□□ -0.15
CTSA-213ENST00000606782 RNF40O75150 1001 aa14.14□□□□□ -0.15
CTSA-213ENST00000606782 FGFR1OPO95684 399 aaKnown RBP14.14□□□□□ -0.15
CTSA-213ENST00000606782 HLA-DRAP01903 254 aa14.14□□□□□ -0.15
CTSA-213ENST00000606782 HOXC13P31276 330 aa14.14□□□□□ -0.15
CTSA-213ENST00000606782 OPRD1P41143 372 aa14.14□□□□□ -0.15
CTSA-213ENST00000606782 RAP1GAPP47736 663 aa14.14□□□□□ -0.15
CTSA-213ENST00000606782 TUBP50607 506 aa14.14□□□□□ -0.15
CTSA-213ENST00000606782 LMNB2Q03252 620 aa14.14□□□□□ -0.15
CTSA-213ENST00000606782 INCA1Q0VD86 236 aa14.14□□□□□ -0.15
CTSA-213ENST00000606782 SYT13Q7L8C5 426 aa14.14□□□□□ -0.15
CTSA-213ENST00000606782 ACOT1Q86TX2 421 aa14.14□□□□□ -0.15
CTSA-213ENST00000606782 DDX42Q86XP3 938 aaKnown RBP eCLIP14.14□□□□□ -0.15
CTSA-213ENST00000606782 IRF2BP1Q8IU81 584 aa14.14□□□□□ -0.15
CTSA-213ENST00000606782 ZMIZ2Q8NF64 920 aa14.14□□□□□ -0.15
CTSA-213ENST00000606782 CCDC26Q8TAB7 109 aa14.14□□□□□ -0.15
CTSA-213ENST00000606782 ELMO3Q96BJ8 720 aa14.14□□□□□ -0.15
CTSA-213ENST00000606782 EEF2KMTQ96G04 330 aa14.14□□□□□ -0.15
CTSA-213ENST00000606782 NAT10Q9H0A0 1025 aaKnown RBP14.14□□□□□ -0.15
CTSA-213ENST00000606782 CYP3A43Q9HB55 503 aa14.14□□□□□ -0.15
CTSA-213ENST00000606782 CPQQ9Y646 472 aa14.14□□□□□ -0.15
CTSA-213ENST00000606782 A0A0A0MRY4 1105 aa14.13□□□□□ -0.15
CTSA-213ENST00000606782 GNA14O95837 355 aa14.13□□□□□ -0.15
CTSA-213ENST00000606782 GTF2H1P32780 548 aa14.13□□□□□ -0.15
CTSA-213ENST00000606782 NDST1P52848 882 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms