RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 ATL3Q6DD88 541 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 TCEAL6Q6IPX3 200 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 ANO7Q6IWH7 933 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 RHBDF2Q6PJF5 856 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 PAQR9Q6ZVX9 377 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 FAM35AQ86V20 835 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 DDX42Q86XP3 938 aaKnown RBP eCLIP13.97□□□□□ -0.17
RPS28-204ENST00000602140 HSCBQ8IWL3 235 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 KIAA0895Q8NCT3 520 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 OVCA2Q8WZ82 227 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 TCEAL3Q969E4 200 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 TNIP3Q96KP6 325 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 PNKPQ96T60 521 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 SDCBP2Q9H190 292 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 EXOC1Q9NV70 894 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 DMAC2Q9NW81 257 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 CFAP45Q9UL16 551 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 MMP17Q9ULZ9 603 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 ACTN4O43707 911 aaKnown RBP13.96□□□□□ -0.17
RPS28-204ENST00000602140 VNN1O95497 513 aa13.96□□□□□ -0.17
RPS28-204ENST00000602140 CAVIN2O95810 425 aa13.96□□□□□ -0.17
RPS28-204ENST00000602140 ADH1CP00326 375 aa13.96□□□□□ -0.17
RPS28-204ENST00000602140 SLFN14P0C7P3 912 aa13.96□□□□□ -0.17
RPS28-204ENST00000602140 ADH5P11766 374 aa13.96□□□□□ -0.17
RPS28-204ENST00000602140 SLC5A3P53794 718 aa13.96□□□□□ -0.17
RPS28-204ENST00000602140 DLG4P78352 724 aa13.96□□□□□ -0.17
RPS28-204ENST00000602140 MRPS21P82921 87 aaKnown RBP13.96□□□□□ -0.17
RPS28-204ENST00000602140 PKP1Q13835 747 aa13.96□□□□□ -0.17
RPS28-204ENST00000602140 CRY1Q16526 586 aa13.96□□□□□ -0.17
RPS28-204ENST00000602140 HECTD3Q5T447 861 aa13.96□□□□□ -0.17
RPS28-204ENST00000602140 ACOT1Q86TX2 421 aa13.96□□□□□ -0.17
RPS28-204ENST00000602140 RASSF3Q86WH2 238 aa13.96□□□□□ -0.17
RPS28-204ENST00000602140 C12orf40Q86WS4 652 aa13.96□□□□□ -0.17
RPS28-204ENST00000602140 TTC30AQ86WT1 665 aa13.96□□□□□ -0.17
RPS28-204ENST00000602140 FUKQ8N0W3 1084 aa13.96□□□□□ -0.17
RPS28-204ENST00000602140 ALLCQ8N6M5 410 aa13.96□□□□□ -0.17
RPS28-204ENST00000602140 SMARCD1Q96GM5 515 aa13.96□□□□□ -0.17
RPS28-204ENST00000602140 PAGE5Q96GU1 130 aa13.96□□□□□ -0.17
RPS28-204ENST00000602140 ZFRQ96KR1 1074 aaKnown RBP13.96□□□□□ -0.17
RPS28-204ENST00000602140 CNOT6LQ96LI5 555 aaKnown RBP13.96□□□□□ -0.17
RPS28-204ENST00000602140 CCSER2Q9H7U1 834 aa13.96□□□□□ -0.17
RPS28-204ENST00000602140 DMAP1Q9NPF5 467 aaPredicted RBP13.96□□□□□ -0.17
RPS28-204ENST00000602140 TBC1D14Q9P2M4 693 aa13.96□□□□□ -0.17
RPS28-204ENST00000602140 RCOR1Q9UKL0 485 aa13.96□□□□□ -0.17
RPS28-204ENST00000602140 E2F8A0AVK6 867 aa13.95□□□□□ -0.18
RPS28-204ENST00000602140 BCLAF3A2AJT9 711 aaKnown RBP13.95□□□□□ -0.18
RPS28-204ENST00000602140 TNFRSF10BO14763 440 aa13.95□□□□□ -0.18
RPS28-204ENST00000602140 AP1G2O75843 785 aa13.95□□□□□ -0.18
RPS28-204ENST00000602140 KAT7O95251 611 aa13.95□□□□□ -0.18
RPS28-204ENST00000602140 KLF8O95600 359 aaPredicted RBP13.95□□□□□ -0.18
RPS28-204ENST00000602140 APODP05090 189 aa13.95□□□□□ -0.18
RPS28-204ENST00000602140 TIE1P35590 1138 aa13.95□□□□□ -0.18
RPS28-204ENST00000602140 EIF2DP41214 584 aaKnown RBP13.95□□□□□ -0.18
RPS28-204ENST00000602140 KDSRQ06136 332 aa13.95□□□□□ -0.18
RPS28-204ENST00000602140 ORC1Q13415 861 aa13.95□□□□□ -0.18
RPS28-204ENST00000602140 KMT5BQ4FZB7 885 aa13.95□□□□□ -0.18
RPS28-204ENST00000602140 LY6G5CQ5SRR4 150 aa13.95□□□□□ -0.18
RPS28-204ENST00000602140 EMC10Q5UCC4 262 aa13.95□□□□□ -0.18
RPS28-204ENST00000602140 SNX30Q5VWJ9 437 aa13.95□□□□□ -0.18
RPS28-204ENST00000602140 PMS2CLQ68D20 193 aa13.95□□□□□ -0.18
RPS28-204ENST00000602140 RNF43Q68DV7 783 aa13.95□□□□□ -0.18
RPS28-204ENST00000602140 TMEM92Q6UXU6 159 aa13.95□□□□□ -0.18
RPS28-204ENST00000602140 SLC9A9Q8IVB4 645 aa13.95□□□□□ -0.18
RPS28-204ENST00000602140 IL17RCQ8NAC3 791 aa13.95□□□□□ -0.18
RPS28-204ENST00000602140 TXNDC5Q8NBS9 432 aaKnown RBP13.95□□□□□ -0.18
RPS28-204ENST00000602140 SPRYD3Q8NCJ5 442 aa13.95□□□□□ -0.18
RPS28-204ENST00000602140 MDGA1Q8NFP4 955 aa13.95□□□□□ -0.18
RPS28-204ENST00000602140 KCTD10Q9H3F6 313 aa13.95□□□□□ -0.18
RPS28-204ENST00000602140 ARHGEF4Q9NR80 690 aa13.95□□□□□ -0.18
RPS28-204ENST00000602140 KRT82Q9NSB4 513 aa13.95□□□□□ -0.18
RPS28-204ENST00000602140 IL37Q9NZH6 218 aa13.95□□□□□ -0.18
RPS28-204ENST00000602140 GMIPQ9P107 970 aa13.95□□□□□ -0.18
RPS28-204ENST00000602140 EPG5Q9HCE0 2579 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 SGK1O00141 431 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 ACACBO00763 2458 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 BEST1O76090 585 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 ALDH1A2O94788 518 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 NR3C1P04150 777 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 CHRM1P11229 460 aaPredicted RBP13.94□□□□□ -0.18
RPS28-204ENST00000602140 P4HA1P13674 534 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 CCDC130P13994 396 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 HNRNPLP14866 589 aaKnown RBP eCLIP13.94□□□□□ -0.18
RPS28-204ENST00000602140 BCKDHBP21953 392 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 GRIA2P42262 883 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 TUBP50607 506 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 NDST1P52848 882 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 SGSM1Q2NKQ1 1148 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 ZACNQ401N2 412 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 N4BP2L1Q5TBK1 243 aaPredicted RBP13.94□□□□□ -0.18
RPS28-204ENST00000602140 C11orf74Q86VG3 221 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 NAT16Q8N8M0 369 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 ZMIZ2Q8NF64 920 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 SLC2A14Q8TDB8 520 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 TMEM174Q8WUU8 243 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 OTUB2Q96DC9 234 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 SMOQ99835 787 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 EDEM2Q9BV94 578 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 LSM14BQ9BX40 385 aaKnown RBP13.94□□□□□ -0.18
RPS28-204ENST00000602140 ZDHHC4Q9NPG8 344 aa13.94□□□□□ -0.18
RPS28-204ENST00000602140 COMMD8Q9NX08 183 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms