RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-223	ENST00000600523	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
SRRM1-223	ENST00000600523	MFSD6L	Q8IWD5	586 aa		13.7	□□□□□ -0.22
SRRM1-223	ENST00000600523	FAM71A	Q8IYT1	594 aa		13.7	□□□□□ -0.22
SRRM1-223	ENST00000600523	MSANTD4	Q8NCY6	345 aa		13.7	□□□□□ -0.22
SRRM1-223	ENST00000600523	RSAD2	Q8WXG1	361 aa		13.7	□□□□□ -0.22
SRRM1-223	ENST00000600523	KCTD13	Q8WZ19	329 aa		13.7	□□□□□ -0.22
SRRM1-223	ENST00000600523	EDA	Q92838	391 aa		13.7	□□□□□ -0.22
SRRM1-223	ENST00000600523	IRF7	Q92985	503 aa		13.7	□□□□□ -0.22
SRRM1-223	ENST00000600523	SECISBP2L	Q93073	1101 aa	Known RBP	13.7	□□□□□ -0.22
SRRM1-223	ENST00000600523	IQCD	Q96DY2	449 aa		13.7	□□□□□ -0.22
SRRM1-223	ENST00000600523	HSFY1	Q96LI6	401 aa		13.7	□□□□□ -0.22
SRRM1-223	ENST00000600523	TRIM62	Q9BVG3	475 aa		13.7	□□□□□ -0.22
SRRM1-223	ENST00000600523	BRD9	Q9H8M2	597 aa		13.7	□□□□□ -0.22
SRRM1-223	ENST00000600523	NLRC4	Q9NPP4	1024 aa		13.7	□□□□□ -0.22
SRRM1-223	ENST00000600523	ST7	Q9NRC1	585 aa		13.7	□□□□□ -0.22
SRRM1-223	ENST00000600523	GMIP	Q9P107	970 aa		13.7	□□□□□ -0.22
SRRM1-223	ENST00000600523	NAGPA	Q9UK23	515 aa		13.7	□□□□□ -0.22
SRRM1-223	ENST00000600523	SIK3	Q9Y2K2	1263 aa		13.7	□□□□□ -0.22
SRRM1-223	ENST00000600523	PTPRD	P23468	1912 aa		13.7	□□□□□ -0.22
SRRM1-223	ENST00000600523		A0A1B0GTH6	734 aa		13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	HHLA1	C9JL84	531 aa		13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	FBXO21	O94952	628 aa		13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	ZBED1	O96006	694 aa		13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	MBL2	P11226	248 aa	Predicted RBP	13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	LCP1	P13796	627 aa		13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	SOX5	P35711	763 aa		13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	ZNF445	P59923	1031 aa		13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	PLCB2	Q00722	1185 aa		13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	SIGLEC14	Q08ET2	396 aa		13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	ADIG	Q0VDE8	80 aa		13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	ZNF268	Q14587	947 aa	Predicted RBP	13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	ARHGAP29	Q52LW3	1261 aa		13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	SNX30	Q5VWJ9	437 aa		13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	RSRC2	Q7L4I2	434 aa	Known RBP	13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	APTX	Q7Z2E3	356 aa	Known RBP	13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	ARL14EP	Q8N8R7	260 aa	Predicted RBP	13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	TTC16	Q8NEE8	873 aa		13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	BPIFB1	Q8TDL5	484 aa		13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	CSGALNACT1	Q8TDX6	532 aa		13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	STK32A	Q8WU08	396 aa		13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	SHD	Q96IW2	340 aa		13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	NUP58	Q9BVL2	599 aa		13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	NAA15	Q9BXJ9	866 aa	Known RBP	13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	MFSD1	Q9H3U5	465 aa		13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	SYNC	Q9H7C4	482 aa		13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	CNGB3	Q9NQW8	809 aa		13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	MYH10	P35580	1976 aa		13.69	□□□□□ -0.22
SRRM1-223	ENST00000600523	TLR5	O60602	858 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	TADA3	O75528	432 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	CYP11B1	P15538	503 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	GDI1	P31150	447 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	ATP5C1	P36542	298 aa	Known RBP	13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	VIPR2	P41587	438 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	KLK7	P49862	253 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	NR1I3	Q14994	352 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	GPRIN1	Q7Z2K8	1008 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	SLC47A2	Q86VL8	602 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	ZNF677	Q86XU0	584 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	RNF214	Q8ND24	703 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	ZNF397	Q8NF99	534 aa	Predicted RBP	13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	IPO4	Q8TEX9	1081 aa	Known RBP	13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	RNF139	Q8WU17	664 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	SLC35F5	Q8WV83	523 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	MIS12	Q9H081	205 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	GAN	Q9H2C0	597 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	LHX5	Q9H2C1	402 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	CYLD	Q9NQC7	956 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	SLC2A4RG	Q9NR83	387 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	CLIC5	Q9NZA1	410 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	WNT16	Q9UBV4	365 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	STRIP2	Q9ULQ0	834 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	MYO6	Q9UM54	1294 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	PCDHGC3	Q9UN70	934 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	ARHGAP26	Q9UNA1	814 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	USP3	Q9Y6I4	520 aa		13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.68	□□□□□ -0.22
SRRM1-223	ENST00000600523	C2orf78	A6NCI8	922 aa		13.67	□□□□□ -0.22
SRRM1-223	ENST00000600523	SLC9A3R1	O14745	358 aa	Predicted RBP	13.67	□□□□□ -0.22
SRRM1-223	ENST00000600523	CHAD	O15335	359 aa		13.67	□□□□□ -0.22
SRRM1-223	ENST00000600523	TEX33	O43247	280 aa		13.67	□□□□□ -0.22
SRRM1-223	ENST00000600523	GFPT2	O94808	682 aa		13.67	□□□□□ -0.22
SRRM1-223	ENST00000600523	OAS1	P00973	400 aa	Known RBP	13.67	□□□□□ -0.22
SRRM1-223	ENST00000600523	CFH	P08603	1231 aa		13.67	□□□□□ -0.22
SRRM1-223	ENST00000600523	ZDHHC11B	P0C7U3	371 aa		13.67	□□□□□ -0.22
SRRM1-223	ENST00000600523	FCAR	P24071	287 aa		13.67	□□□□□ -0.22
SRRM1-223	ENST00000600523	CLCN1	P35523	988 aa		13.67	□□□□□ -0.22
SRRM1-223	ENST00000600523	RGS7	P49802	495 aa		13.67	□□□□□ -0.22
SRRM1-223	ENST00000600523	SLC7A9	P82251	487 aa		13.67	□□□□□ -0.22
SRRM1-223	ENST00000600523	AMPD2	Q01433	879 aa		13.67	□□□□□ -0.22
SRRM1-223	ENST00000600523	GRM2	Q14416	872 aa		13.67	□□□□□ -0.22
SRRM1-223	ENST00000600523	PKDCC	Q504Y2	493 aa		13.67	□□□□□ -0.22
SRRM1-223	ENST00000600523	RAB41	Q5JT25	222 aa		13.67	□□□□□ -0.22
SRRM1-223	ENST00000600523	C10orf120	Q5SQS8	335 aa		13.67	□□□□□ -0.22
SRRM1-223	ENST00000600523	BTBD8	Q5XKL5	378 aa		13.67	□□□□□ -0.22
SRRM1-223	ENST00000600523	VIT	Q6UXI7	678 aa		13.67	□□□□□ -0.22
SRRM1-223	ENST00000600523	TRIM67	Q6ZTA4	783 aa		13.67	□□□□□ -0.22
SRRM1-223	ENST00000600523	TMEM35B	Q8NCS4	154 aa		13.67	□□□□□ -0.22
SRRM1-223	ENST00000600523	ST13P5	Q8NFI4	369 aa	Predicted RBP	13.67	□□□□□ -0.22
SRRM1-223	ENST00000600523	IRGQ	Q8WZA9	623 aa		13.67	□□□□□ -0.22
SRRM1-223	ENST00000600523	DNASE1L2	Q92874	299 aa		13.67	□□□□□ -0.22

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