RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 GKN1Q9NS71 199 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 FAM86C1Q9NVL1 165 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 TMEM63CQ9P1W3 806 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 PROB1E7EW31 1015 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 LEFTY2O00292 366 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 AFPP02771 609 aaKnown RBP8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 CCDC192P0DO97 292 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 CHRNB1P11230 501 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 NBL1P41271 181 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 IFNAR2P48551 515 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 KCNH2Q12809 1159 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 LRMPQ12912 555 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 RUNX3Q13761 415 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 DPCR1Q3MIW9 517 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 TRIM68Q6AZZ1 485 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 CC2D1AQ6P1N0 951 aaPredicted RBP8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 SASS6Q6UVJ0 657 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 C1orf210Q8IVY1 113 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 MAML2Q8IZL2 1156 aaPredicted RBP8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 OSCP1Q8WVF1 389 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 CHFRQ96EP1 664 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 CNOT6LQ96LI5 555 aaKnown RBP8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 NT5C1BQ96P26 610 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 PHOX2BQ99453 314 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 DUSP16Q9BY84 665 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 RNF38Q9H0F5 515 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 FBXO44Q9H4M3 255 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 EBF3Q9H4W6 596 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 ANO10Q9NW15 660 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 GMIPQ9P107 970 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 NDRG2Q9UN36 371 aaKnown RBP8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 CPQQ9Y646 472 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 WNT6Q9Y6F9 365 aa8.43□□□□□ -1.06
CHMP2A-205ENST00000600006 OTOL1A6NHN0 477 aaPredicted RBP8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 COCHO43405 550 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 ABL1P00519 1130 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 MBL2P11226 248 aaPredicted RBP8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 ARSAP15289 507 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 ACO1P21399 889 aaKnown RBP8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 ERCC5P28715 1186 aaPredicted RBP8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 PGFP49763 221 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 KIF11P52732 1056 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 GCNT1Q02742 428 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 CETN1Q12798 172 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 CCINQ13939 588 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 LRRC32Q14392 662 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 STX1AQ16623 288 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 EML3Q32P44 896 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 DGKKQ5KSL6 1271 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 HECTD3Q5T447 861 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 MAMSTRQ6ZN01 415 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 CCDC186Q7Z3E2 898 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 TTC30AQ86WT1 665 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 DDX42Q86XP3 938 aaKnown RBP eCLIP8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 IRF2BP1Q8IU81 584 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 ARHGEF19Q8IW93 802 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 PPM1KQ8N3J5 372 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 CPA6Q8N4T0 437 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 ANKRD52Q8NB46 1076 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 TTC8Q8TAM2 541 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 ATOH1Q92858 354 aaPredicted RBP8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 KAT5Q92993 513 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 ATP2A3Q93084 1043 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 JAKMIP2Q96AA8 810 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 ZFRQ96KR1 1074 aaKnown RBP8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 HEXIM2Q96MH2 286 aaKnown RBP8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 UBXN6Q9BZV1 441 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 CCSER2Q9H7U1 834 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 ECT2Q9H8V3 914 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 LMAN1LQ9HAT1 526 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 NMUR1Q9HB89 426 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 CYLDQ9NQC7 956 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 PRMT8Q9NR22 394 aaPredicted RBP8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 TLR8Q9NR97 1041 aaKnown RBP8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 SPATA6Q9NWH7 488 aaPredicted RBP8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 DUS2Q9NX74 493 aaKnown RBP8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 CHORDC1Q9UHD1 332 aaPredicted RBP8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 TSPAN16Q9UKR8 245 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 FBXO4Q9UKT5 387 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 SCML2Q9UQR0 700 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 USP3Q9Y6I4 520 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 CACNA1IQ9P0X4 2223 aa8.42□□□□□ -1.06
CHMP2A-205ENST00000600006 O00370 1275 aa8.41□□□□□ -1.06
CHMP2A-205ENST00000600006 TRDMT1O14717 391 aaKnown RBP8.41□□□□□ -1.06
CHMP2A-205ENST00000600006 SLC9A3R1O14745 358 aaPredicted RBP8.41□□□□□ -1.06
CHMP2A-205ENST00000600006 CYP26A1O43174 497 aa8.41□□□□□ -1.06
CHMP2A-205ENST00000600006 LAMTOR5O43504 91 aa8.41□□□□□ -1.06
CHMP2A-205ENST00000600006 TLR5O60602 858 aa8.41□□□□□ -1.06
CHMP2A-205ENST00000600006 NFATC1O95644 943 aa8.41□□□□□ -1.06
CHMP2A-205ENST00000600006 PAEPP09466 180 aa8.41□□□□□ -1.06
CHMP2A-205ENST00000600006 SP9P0CG40 484 aa8.41□□□□□ -1.06
CHMP2A-205ENST00000600006 VDRP11473 427 aa8.41□□□□□ -1.06
CHMP2A-205ENST00000600006 GJA4P35212 333 aa8.41□□□□□ -1.06
CHMP2A-205ENST00000600006 MRE11P49959 708 aa8.41□□□□□ -1.06
CHMP2A-205ENST00000600006 ZNF132P52740 706 aa8.41□□□□□ -1.06
CHMP2A-205ENST00000600006 BCAT1P54687 386 aa8.41□□□□□ -1.06
CHMP2A-205ENST00000600006 AMPD2Q01433 879 aa8.41□□□□□ -1.06
CHMP2A-205ENST00000600006 BST2Q10589 180 aaKnown RBP8.41□□□□□ -1.06
CHMP2A-205ENST00000600006 MTAPQ13126 283 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms