RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 RSPRY1Q96DX4 576 aa13.59□□□□□ -0.23
SH2D3A-208ENST00000599563 ERGIC2Q96RQ1 377 aa13.59□□□□□ -0.23
SH2D3A-208ENST00000599563 ARID3AQ99856 593 aa13.59□□□□□ -0.23
SH2D3A-208ENST00000599563 GANQ9H2C0 597 aa13.59□□□□□ -0.23
SH2D3A-208ENST00000599563 TRPM5Q9NZQ8 1165 aa13.59□□□□□ -0.23
SH2D3A-208ENST00000599563 NME7Q9Y5B8 376 aa13.59□□□□□ -0.23
SH2D3A-208ENST00000599563 HCRTO43612 131 aa13.58□□□□□ -0.24
SH2D3A-208ENST00000599563 CKMP06732 381 aa13.58□□□□□ -0.24
SH2D3A-208ENST00000599563 ASPAP45381 313 aa13.58□□□□□ -0.24
SH2D3A-208ENST00000599563 GPR15P49685 360 aa13.58□□□□□ -0.24
SH2D3A-208ENST00000599563 GSE1Q14687 1217 aa13.58□□□□□ -0.24
SH2D3A-208ENST00000599563 PDGFRLQ15198 375 aa13.58□□□□□ -0.24
SH2D3A-208ENST00000599563 ITPRIPL2Q3MIP1 535 aa13.58□□□□□ -0.24
SH2D3A-208ENST00000599563 FKBP15Q5T1M5 1219 aa13.58□□□□□ -0.24
SH2D3A-208ENST00000599563 SDHAF4Q5VUM1 108 aa13.58□□□□□ -0.24
SH2D3A-208ENST00000599563 UNC93AQ86WB7 457 aa13.58□□□□□ -0.24
SH2D3A-208ENST00000599563 TTC39CQ8N584 583 aa13.58□□□□□ -0.24
SH2D3A-208ENST00000599563 FAXDC2Q96IV6 333 aa13.58□□□□□ -0.24
SH2D3A-208ENST00000599563 SLITRK1Q96PX8 696 aa13.58□□□□□ -0.24
SH2D3A-208ENST00000599563 PHOX2BQ99453 314 aa13.58□□□□□ -0.24
SH2D3A-208ENST00000599563 TTLL2Q9BWV7 592 aa13.58□□□□□ -0.24
SH2D3A-208ENST00000599563 FAM126AQ9BYI3 521 aaPredicted RBP13.58□□□□□ -0.24
SH2D3A-208ENST00000599563 TRIM5Q9C035 493 aa13.58□□□□□ -0.24
SH2D3A-208ENST00000599563 CHRDQ9H2X0 955 aa13.58□□□□□ -0.24
SH2D3A-208ENST00000599563 FAM124BQ9H5Z6 455 aaPredicted RBP13.58□□□□□ -0.24
SH2D3A-208ENST00000599563 SMYD3Q9H7B4 428 aa13.58□□□□□ -0.24
SH2D3A-208ENST00000599563 NDRG2Q9UN36 371 aaKnown RBP13.58□□□□□ -0.24
SH2D3A-208ENST00000599563 MTF2Q9Y483 593 aaPredicted RBP13.58□□□□□ -0.24
SH2D3A-208ENST00000599563 FHOD1Q9Y613 1164 aa13.58□□□□□ -0.24
SH2D3A-208ENST00000599563 RIF1Q5UIP0 2472 aaKnown RBP13.58□□□□□ -0.24
SH2D3A-208ENST00000599563 COL4A3Q01955 1670 aa13.57□□□□□ -0.24
SH2D3A-208ENST00000599563 FAM186AA6NE01 2351 aa13.57□□□□□ -0.24
SH2D3A-208ENST00000599563 RTN3O95197 1032 aaPredicted RBP13.57□□□□□ -0.24
SH2D3A-208ENST00000599563 CDH8P55286 799 aa13.57□□□□□ -0.24
SH2D3A-208ENST00000599563 DGKKQ5KSL6 1271 aa13.57□□□□□ -0.24
SH2D3A-208ENST00000599563 TXNDC8Q6A555 127 aa13.57□□□□□ -0.24
SH2D3A-208ENST00000599563 RRAGAQ7L523 313 aa13.57□□□□□ -0.24
SH2D3A-208ENST00000599563 GPIHBP1Q8IV16 184 aa13.57□□□□□ -0.24
SH2D3A-208ENST00000599563 SYNPOQ8N3V7 929 aa13.57□□□□□ -0.24
SH2D3A-208ENST00000599563 KIAA1958Q8N8K9 716 aa13.57□□□□□ -0.24
SH2D3A-208ENST00000599563 PDZD8Q8NEN9 1154 aa13.57□□□□□ -0.24
SH2D3A-208ENST00000599563 USP13Q92995 863 aaPredicted RBP13.57□□□□□ -0.24
SH2D3A-208ENST00000599563 KREMEN1Q96MU8 473 aa13.57□□□□□ -0.24
SH2D3A-208ENST00000599563 NT5C1BQ96P26 610 aa13.57□□□□□ -0.24
SH2D3A-208ENST00000599563 NIF3L1Q9GZT8 377 aa13.57□□□□□ -0.24
SH2D3A-208ENST00000599563 CYP3A43Q9HB55 503 aa13.57□□□□□ -0.24
SH2D3A-208ENST00000599563 FAM207AQ9NSI2 230 aaPredicted RBP13.57□□□□□ -0.24
SH2D3A-208ENST00000599563 NCANO14594 1321 aa13.57□□□□□ -0.24
SH2D3A-208ENST00000599563 A0A1W2PQC6 194 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 PRR23AA6NEV1 266 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 F8VP50 259 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 SPECC1L-ADORA2AF8WAN1 911 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 CBFA2T2O43439 604 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 SP9P0CG40 484 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 PNMA6AP0CW24 399 aaPredicted RBP13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 TCF3P15923 654 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 HDCP19113 662 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 CTHP32929 405 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 NRLP54845 237 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 CCDC142Q17RM4 750 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 VSTM4Q8IW00 320 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 ZNF687Q8N1G0 1237 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 CRYBG2Q8N1P7 616 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 PPM1KQ8N3J5 372 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 UBR7Q8N806 425 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 OVCA2Q8WZ82 227 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 SMARCD1Q96GM5 515 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 PCMTD1Q96MG8 357 aaPredicted RBP13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 LRRC3BQ96PB8 259 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 FAM83CQ9BQN1 747 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 MED10Q9BTT4 135 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 B3GNT5Q9BYG0 378 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 TTYH3Q9C0H2 523 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 TRPC7Q9HCX4 862 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 DMAP1Q9NPF5 467 aaPredicted RBP13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 GKN1Q9NS71 199 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 COMMD8Q9NX08 183 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 APEX2Q9UBZ4 518 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 HMGXB4Q9UGU5 601 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 PCDHGA2Q9Y5H1 932 aa13.56□□□□□ -0.24
SH2D3A-208ENST00000599563 SHISA7A6NL88 538 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 RNF225M0QZC1 329 aaPredicted RBP13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 TADA3O75528 432 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 ADCY5O95622 1261 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 YWHAQP27348 245 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 CCR3P51677 355 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 GOLGA8FQ08AF8 430 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 GOLGA8DPQ0D2H9 430 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 INCA1Q0VD86 236 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 CETN1Q12798 172 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 ORC1Q13415 861 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 CUL2Q13617 745 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 RUNX3Q13761 415 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 MTF1Q14872 753 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 ARHGAP44Q17R89 818 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 WDR44Q5JSH3 913 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 KLHDC7AQ5VTJ3 777 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 NUP93Q8N1F7 819 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 CPA6Q8N4T0 437 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 STKLD1Q8NE28 680 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms